Protein–RNA interactions for Protein: Q8IW19

APLF, Aprataxin and PNK-like factor, humanhuman

Predicted RBP Predictions only

Length 511 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APLFQ8IW19 AL357033.4-201ENST00000617703 1807 ntBASIC17.09■□□□□ 0.33
APLFQ8IW19 TLCD2-201ENST00000330676 5971 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
APLFQ8IW19 ARL6IP1-201ENST00000304414 2409 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
APLFQ8IW19 JMJD4-206ENST00000615711 2591 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
APLFQ8IW19 HAGH-202ENST00000397356 2984 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
APLFQ8IW19 ZNF425-201ENST00000378061 3220 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
APLFQ8IW19 GSKIP-207ENST00000556095 3834 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
APLFQ8IW19 AP3D1-202ENST00000355272 5034 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
APLFQ8IW19 ST14-201ENST00000278742 3539 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
APLFQ8IW19 C2CD4A-201ENST00000355522 3445 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
APLFQ8IW19 AC008741.2-201ENST00000612792 3115 ntBASIC17.08■□□□□ 0.33
APLFQ8IW19 HDAC11-214ENST00000446613 2875 ntTSL 5 BASIC17.08■□□□□ 0.33
APLFQ8IW19 DNAAF2-202ENST00000406043 2819 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.33
APLFQ8IW19 PBX3-204ENST00000373489 2775 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.33
APLFQ8IW19 BEGAIN-201ENST00000355173 2674 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
APLFQ8IW19 TCAF2P1-201ENST00000291129 2421 ntBASIC17.08■□□□□ 0.33
APLFQ8IW19 F7-201ENST00000346342 2409 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.33
APLFQ8IW19 PML-206ENST00000395135 2199 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.33
APLFQ8IW19 DDHD1-202ENST00000357758 5603 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.33
APLFQ8IW19 TMSB4Y-201ENST00000284856 1669 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
APLFQ8IW19 ARFRP1-207ENST00000612157 1698 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
APLFQ8IW19 ZNF655-202ENST00000320583 1601 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
APLFQ8IW19 CA9-201ENST00000378357 1618 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
APLFQ8IW19 MEG3-205ENST00000412736 1615 ntTSL 2 BASIC17.08■□□□□ 0.32
APLFQ8IW19 STARD10-218ENST00000543304 1513 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
APLFQ8IW19 RPL3-201ENST00000216146 1442 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
APLFQ8IW19 HOXB3-205ENST00000470495 4208 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
APLFQ8IW19 TNNI3-201ENST00000344887 840 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
APLFQ8IW19 ART5-201ENST00000359918 1241 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
APLFQ8IW19 BOLA1-201ENST00000369150 811 ntAPPRIS P1 TSL 3 BASIC17.08■□□□□ 0.32
APLFQ8IW19 HYI-201ENST00000372425 1265 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
APLFQ8IW19 ROMO1-204ENST00000374078 498 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
APLFQ8IW19 IGF2-202ENST00000381392 1005 ntAPPRIS ALT1 TSL 1 (best) BASIC17.08■□□□□ 0.32
APLFQ8IW19 SBDSP1-202ENST00000423945 618 ntTSL 3 BASIC17.08■□□□□ 0.32
APLFQ8IW19 NTMT1-205ENST00000459968 1123 ntTSL 2 BASIC17.08■□□□□ 0.32
APLFQ8IW19 PQLC2L-205ENST00000461040 563 ntAPPRIS ALT2 TSL 3 BASIC17.08■□□□□ 0.32
APLFQ8IW19 NTMT1-207ENST00000482347 1072 ntTSL 2 BASIC17.08■□□□□ 0.32
APLFQ8IW19 REEP1-209ENST00000541910 969 ntTSL 2 BASIC17.08■□□□□ 0.32
APLFQ8IW19 HDDC3-205ENST00000559898 1024 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
APLFQ8IW19 AL449423.1-201ENST00000578935 435 ntTSL 3 BASIC17.08■□□□□ 0.32
APLFQ8IW19 AC011511.2-201ENST00000592893 918 ntTSL 3 BASIC17.08■□□□□ 0.32
APLFQ8IW19 GPALPP1-207ENST00000611650 899 ntBASIC17.08■□□□□ 0.32
APLFQ8IW19 AC004263.2-201ENST00000617183 678 ntBASIC17.08■□□□□ 0.32
APLFQ8IW19 MALAT1-215ENST00000619449 794 ntTSL 3 BASIC17.08■□□□□ 0.32
APLFQ8IW19 AC124864.1-201ENST00000623408 392 ntBASIC17.08■□□□□ 0.32
APLFQ8IW19 CYP4F11-203ENST00000402119 3161 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
APLFQ8IW19 PROSER1-211ENST00000625998 5102 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.32
APLFQ8IW19 COX10-201ENST00000261643 2873 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
APLFQ8IW19 SPG11-215ENST00000559193 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
APLFQ8IW19 PML-221ENST00000569965 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
APLFQ8IW19 OR4D1-202ENST00000641449 4925 ntAPPRIS P1 BASIC17.08■□□□□ 0.32
APLFQ8IW19 DUS1L-201ENST00000306796 2068 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
APLFQ8IW19 AL162586.1-201ENST00000439298 2055 ntTSL 2 BASIC17.08■□□□□ 0.32
APLFQ8IW19 AL096828.2-201ENST00000567259 1965 ntBASIC17.08■□□□□ 0.32
APLFQ8IW19 CDC42BPG-201ENST00000342711 5742 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
APLFQ8IW19 DNAAF2-201ENST00000298292 2963 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
APLFQ8IW19 ZBTB46-201ENST00000245663 5185 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
APLFQ8IW19 BRF1-206ENST00000446501 2858 ntTSL 2 BASIC17.07■□□□□ 0.32
APLFQ8IW19 SMC4-204ENST00000462787 5033 ntTSL 2 BASIC17.07■□□□□ 0.32
APLFQ8IW19 SH2D3C-205ENST00000420366 2682 ntTSL 2 BASIC17.07■□□□□ 0.32
APLFQ8IW19 AC021148.1-201ENST00000513652 1532 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
APLFQ8IW19 PDLIM2-206ENST00000409141 1463 ntTSL 2 BASIC17.07■□□□□ 0.32
APLFQ8IW19 CELF6-201ENST00000287202 3345 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
APLFQ8IW19 IPMK-201ENST00000373935 6133 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
APLFQ8IW19 RPN1-201ENST00000296255 2314 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
APLFQ8IW19 ZNF84-208ENST00000539354 3237 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
APLFQ8IW19 SLIT3-201ENST00000332966 4895 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
APLFQ8IW19 SMIM24-201ENST00000215531 1329 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
APLFQ8IW19 SLC41A3-203ENST00000360370 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
APLFQ8IW19 TMEM14A-201ENST00000211314 992 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
APLFQ8IW19 RSPH14-201ENST00000216036 1291 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
APLFQ8IW19 SNRPA1-201ENST00000254193 1055 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
APLFQ8IW19 ID2-202ENST00000331129 623 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
APLFQ8IW19 SPIN2B-202ENST00000333933 1258 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
APLFQ8IW19 AC007834.1-201ENST00000446473 728 ntTSL 3 BASIC17.07■□□□□ 0.32
APLFQ8IW19 PLXND1-205ENST00000504689 546 ntTSL 3 BASIC17.07■□□□□ 0.32
APLFQ8IW19 CCDC61-201ENST00000536603 1282 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
APLFQ8IW19 ABR-204ENST00000543210 1049 ntTSL 2 BASIC17.07■□□□□ 0.32
APLFQ8IW19 ARHGEF28-214ENST00000545377 6351 ntAPPRIS P3 TSL 5 BASIC17.07■□□□□ 0.32
APLFQ8IW19 SAXO2-206ENST00000566205 340 ntAPPRIS ALT2 TSL 2 BASIC17.07■□□□□ 0.32
APLFQ8IW19 FAM220A-205ENST00000578372 207 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
APLFQ8IW19 AC008735.1-201ENST00000592252 802 ntTSL 5 BASIC17.07■□□□□ 0.32
APLFQ8IW19 CCNC-219ENST00000627680 896 ntTSL 5 BASIC17.07■□□□□ 0.32
APLFQ8IW19 PRKAG1-206ENST00000548065 2071 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
APLFQ8IW19 AL513523.2-202ENST00000427283 2040 ntBASIC17.07■□□□□ 0.32
APLFQ8IW19 TMPRSS5-207ENST00000540540 2001 ntTSL 2 BASIC17.07■□□□□ 0.32
APLFQ8IW19 RAB17-201ENST00000264601 1966 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
APLFQ8IW19 GALNT11-205ENST00000430044 2727 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
APLFQ8IW19 CTNNBL1-201ENST00000361383 1925 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
APLFQ8IW19 LILRB5-202ENST00000345866 1864 ntTSL 2 BASIC17.07■□□□□ 0.32
APLFQ8IW19 PCBP4-203ENST00000428823 1835 ntTSL 5 BASIC17.07■□□□□ 0.32
APLFQ8IW19 ASTN2-205ENST00000361209 4622 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
APLFQ8IW19 YY1AP1-210ENST00000368339 3073 ntAPPRIS ALT2 TSL 2 BASIC17.07■□□□□ 0.32
APLFQ8IW19 PDPK2P-201ENST00000382326 2387 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
APLFQ8IW19 BRF1-201ENST00000327359 2292 ntTSL 2 BASIC17.07■□□□□ 0.32
APLFQ8IW19 TSC2-207ENST00000439673 5287 ntAPPRIS ALT2 TSL 2 BASIC17.06■□□□□ 0.32
APLFQ8IW19 AC002310.5-201ENST00000569360 1515 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
APLFQ8IW19 ELAC2-203ENST00000426905 2671 ntTSL 2 BASIC17.06■□□□□ 0.32
APLFQ8IW19 ABHD14B-206ENST00000483233 2056 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
APLFQ8IW19 GLG1-201ENST00000205061 8261 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 31.9 ms