Protein–RNA interactions for Protein: Q7Z3D4

LYSMD3, LysM and putative peptidoglycan-binding domain-containing protein 3, humanhuman

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD3Q7Z3D4 AC046158.3-201ENST00000624947 2558 ntBASIC17.26■□□□□ 0.35
LYSMD3Q7Z3D4 FARP1-242ENST00000627049 5103 ntTSL 5 BASIC17.26■□□□□ 0.35
LYSMD3Q7Z3D4 BTBD1-201ENST00000261721 3297 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
LYSMD3Q7Z3D4 CACNA1A-247ENST00000637769 8648 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
LYSMD3Q7Z3D4 TMEM50B-210ENST00000542230 2375 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
LYSMD3Q7Z3D4 TAL1-201ENST00000294339 5001 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
LYSMD3Q7Z3D4 PITHD1-201ENST00000246151 1603 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
LYSMD3Q7Z3D4 HLA-A-201ENST00000376802 1334 ntBASIC17.25■□□□□ 0.35
LYSMD3Q7Z3D4 AL590787.1-201ENST00000568856 1315 ntBASIC17.25■□□□□ 0.35
LYSMD3Q7Z3D4 VASH1-201ENST00000167106 5728 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
LYSMD3Q7Z3D4 TACC3-201ENST00000313288 2781 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
LYSMD3Q7Z3D4 CCNI2-204ENST00000614847 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
LYSMD3Q7Z3D4 ATAD3A-207ENST00000536055 2332 ntTSL 2 BASIC17.25■□□□□ 0.35
LYSMD3Q7Z3D4 AC006504.4-201ENST00000592118 1568 ntBASIC17.25■□□□□ 0.35
LYSMD3Q7Z3D4 DBI-201ENST00000311521 714 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
LYSMD3Q7Z3D4 SMIM29-201ENST00000335352 1160 ntTSL 2 BASIC17.25■□□□□ 0.35
LYSMD3Q7Z3D4 DNAH14-205ENST00000366850 1103 ntTSL 5 BASIC17.25■□□□□ 0.35
LYSMD3Q7Z3D4 HLA-DMA-201ENST00000374843 1123 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
LYSMD3Q7Z3D4 ITM2B-201ENST00000378549 805 ntTSL 5 BASIC17.25■□□□□ 0.35
LYSMD3Q7Z3D4 TRIM36-203ENST00000379618 693 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
LYSMD3Q7Z3D4 AL645941.2-201ENST00000429234 612 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
LYSMD3Q7Z3D4 CNOT8-225ENST00000524105 904 ntTSL 2 BASIC17.25■□□□□ 0.35
LYSMD3Q7Z3D4 TRMT112-203ENST00000535750 823 ntTSL 2 BASIC17.25■□□□□ 0.35
LYSMD3Q7Z3D4 RPS15A-205ENST00000565420 802 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
LYSMD3Q7Z3D4 AC006557.2-201ENST00000592985 1240 ntBASIC17.25■□□□□ 0.35
LYSMD3Q7Z3D4 SMIM22-210ENST00000615471 928 ntAPPRIS ALT2 TSL 3 BASIC17.25■□□□□ 0.35
LYSMD3Q7Z3D4 AC092902.2-205ENST00000622381 394 ntTSL 5 BASIC17.25■□□□□ 0.35
LYSMD3Q7Z3D4 DHCR7-201ENST00000355527 2666 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
LYSMD3Q7Z3D4 CLEC18B-206ENST00000620745 1847 ntTSL 5 BASIC17.25■□□□□ 0.35
LYSMD3Q7Z3D4 SP3-203ENST00000418194 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
LYSMD3Q7Z3D4 FLT1-201ENST00000282397 7092 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
LYSMD3Q7Z3D4 PHGDH-208ENST00000641023 2096 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
LYSMD3Q7Z3D4 HSPA8-224ENST00000534624 2463 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
LYSMD3Q7Z3D4 PRRT4-205ENST00000489835 2313 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
LYSMD3Q7Z3D4 ISM1-201ENST00000262487 2593 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
LYSMD3Q7Z3D4 AC079922.2-201ENST00000457336 2022 ntTSL 2 BASIC17.25■□□□□ 0.35
LYSMD3Q7Z3D4 KBTBD11-201ENST00000320248 6710 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
LYSMD3Q7Z3D4 TRABD-202ENST00000380909 2272 ntAPPRIS P3 TSL 5 BASIC17.24■□□□□ 0.35
LYSMD3Q7Z3D4 PACSIN2-205ENST00000407585 3080 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
LYSMD3Q7Z3D4 MSLNL-201ENST00000442466 2109 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
LYSMD3Q7Z3D4 LUC7L2-202ENST00000354926 2645 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
LYSMD3Q7Z3D4 SPRED2-206ENST00000443619 1800 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
LYSMD3Q7Z3D4 SELENBP1-204ENST00000426705 1928 ntTSL 2 BASIC17.24■□□□□ 0.35
LYSMD3Q7Z3D4 RHBDF1P1-201ENST00000427504 1941 ntBASIC17.24■□□□□ 0.35
LYSMD3Q7Z3D4 AC131160.1-201ENST00000639401 3058 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
LYSMD3Q7Z3D4 ACBD3-201ENST00000366812 3573 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
LYSMD3Q7Z3D4 SERF1B-202ENST00000380751 703 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
LYSMD3Q7Z3D4 GYG2P1-204ENST00000382966 639 ntTSL 3 BASIC17.24■□□□□ 0.35
LYSMD3Q7Z3D4 KRT18P27-201ENST00000427733 1299 ntBASIC17.24■□□□□ 0.35
LYSMD3Q7Z3D4 HFE-210ENST00000470149 1123 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
LYSMD3Q7Z3D4 TCTN1-208ENST00000471804 718 ntTSL 3 BASIC17.24■□□□□ 0.35
LYSMD3Q7Z3D4 ARTN-206ENST00000472435 402 ntTSL 3 BASIC17.24■□□□□ 0.35
LYSMD3Q7Z3D4 AC079776.4-201ENST00000511039 504 ntBASIC17.24■□□□□ 0.35
LYSMD3Q7Z3D4 EEF1D-238ENST00000531621 840 ntTSL 3 BASIC17.24■□□□□ 0.35
LYSMD3Q7Z3D4 TUBB3-205ENST00000554336 903 ntTSL 3 BASIC17.24■□□□□ 0.35
LYSMD3Q7Z3D4 ADAM10-217ENST00000561288 583 ntTSL 3 BASIC17.24■□□□□ 0.35
LYSMD3Q7Z3D4 SPINT1-AS1-203ENST00000565315 629 ntTSL 2 BASIC17.24■□□□□ 0.35
LYSMD3Q7Z3D4 IER2-202ENST00000587885 1291 ntAPPRIS P1 TSL 3 BASIC17.24■□□□□ 0.35
LYSMD3Q7Z3D4 AC018529.2-201ENST00000612024 828 ntTSL 4 BASIC17.24■□□□□ 0.35
LYSMD3Q7Z3D4 AC243547.2-201ENST00000616257 234 ntTSL 3 BASIC17.24■□□□□ 0.35
LYSMD3Q7Z3D4 TSPY4-205ENST00000640033 663 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
LYSMD3Q7Z3D4 PYCR3-201ENST00000220966 2678 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
LYSMD3Q7Z3D4 SKP2-201ENST00000274254 1537 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
LYSMD3Q7Z3D4 GMPPA-204ENST00000373908 1501 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
LYSMD3Q7Z3D4 DPF3-204ENST00000546183 1514 ntTSL 2 BASIC17.24■□□□□ 0.35
LYSMD3Q7Z3D4 PTP4A3-201ENST00000329397 2785 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
LYSMD3Q7Z3D4 DMPK-204ENST00000447742 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
LYSMD3Q7Z3D4 PBK-201ENST00000301905 2118 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
LYSMD3Q7Z3D4 WT1-201ENST00000332351 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
LYSMD3Q7Z3D4 PTHLH-205ENST00000535992 1891 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
LYSMD3Q7Z3D4 NCOA5-201ENST00000290231 3220 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
LYSMD3Q7Z3D4 ZBTB47-202ENST00000505904 2456 ntTSL 5 BASIC17.24■□□□□ 0.35
LYSMD3Q7Z3D4 SMOX-205ENST00000379460 2230 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
LYSMD3Q7Z3D4 PCDHA6-202ENST00000527624 2231 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
LYSMD3Q7Z3D4 FTSJ1-201ENST00000019019 1986 ntAPPRIS ALT1 TSL 2 BASIC17.24■□□□□ 0.35
LYSMD3Q7Z3D4 ZBTB32-201ENST00000262630 1960 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
LYSMD3Q7Z3D4 PLCG1-202ENST00000373271 7395 ntAPPRIS ALT1 TSL 1 (best) BASIC17.24■□□□□ 0.35
LYSMD3Q7Z3D4 AP002414.3-201ENST00000589352 1468 ntBASIC17.24■□□□□ 0.35
LYSMD3Q7Z3D4 LINC00894-202ENST00000425602 1597 ntTSL 2 BASIC17.23■□□□□ 0.35
LYSMD3Q7Z3D4 AMFR-201ENST00000290649 3600 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
LYSMD3Q7Z3D4 FBXO18-203ENST00000397269 3640 ntTSL 5 BASIC17.23■□□□□ 0.35
LYSMD3Q7Z3D4 FERMT2-203ENST00000395631 3369 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
LYSMD3Q7Z3D4 TRIM11-202ENST00000366699 2511 ntTSL 2 BASIC17.23■□□□□ 0.35
LYSMD3Q7Z3D4 U2AF2-201ENST00000308924 1698 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
LYSMD3Q7Z3D4 LY6E-207ENST00000520466 1419 ntAPPRIS P2 TSL 2 BASIC17.23■□□□□ 0.35
LYSMD3Q7Z3D4 MFF-202ENST00000337110 1760 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
LYSMD3Q7Z3D4 TEX261-201ENST00000272438 3441 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
LYSMD3Q7Z3D4 AC018695.7-201ENST00000624587 2492 ntBASIC17.23■□□□□ 0.35
LYSMD3Q7Z3D4 AC011270.2-201ENST00000624293 2550 ntBASIC17.23■□□□□ 0.35
LYSMD3Q7Z3D4 DHDH-201ENST00000221403 1081 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
LYSMD3Q7Z3D4 PTH2-201ENST00000270631 459 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
LYSMD3Q7Z3D4 RPS2P28-201ENST00000314255 741 ntBASIC17.23■□□□□ 0.35
LYSMD3Q7Z3D4 AC073621.1-201ENST00000392730 636 ntBASIC17.23■□□□□ 0.35
LYSMD3Q7Z3D4 CENPM-204ENST00000402420 688 ntTSL 5 BASIC17.23■□□□□ 0.35
LYSMD3Q7Z3D4 LMX1B-203ENST00000526117 1195 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
LYSMD3Q7Z3D4 AC068389.2-201ENST00000529518 430 ntTSL 2 BASIC17.23■□□□□ 0.35
LYSMD3Q7Z3D4 AC105339.3-201ENST00000560043 636 ntBASIC17.23■□□□□ 0.35
LYSMD3Q7Z3D4 ZFPM1-204ENST00000563351 808 ntTSL 2 BASIC17.23■□□□□ 0.35
LYSMD3Q7Z3D4 SCN5A-214ENST00000612060 714 ntTSL 5 BASIC17.23■□□□□ 0.35
LYSMD3Q7Z3D4 AC005920.1-201ENST00000501718 2054 ntTSL 2 BASIC17.23■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 29 ms