Protein–RNA interactions for Protein: Q53FP2

TMEM35A, Transmembrane protein 35A, humanhuman

Predictions only

Length 167 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM35AQ53FP2 KDM1A-201ENST00000356634 3033 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
TMEM35AQ53FP2 HMCN2-204ENST00000611173 1920 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
TMEM35AQ53FP2 GGNBP2-212ENST00000613102 2847 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
TMEM35AQ53FP2 GPR137-212ENST00000539851 1843 ntTSL 2 BASIC16.31■□□□□ 0.2
TMEM35AQ53FP2 SQOR-208ENST00000568606 1792 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
TMEM35AQ53FP2 HNRNPRP1-201ENST00000453465 1695 ntBASIC16.3■□□□□ 0.2
TMEM35AQ53FP2 SYNGAP1-202ENST00000418600 5828 ntTSL 5 BASIC16.3■□□□□ 0.2
TMEM35AQ53FP2 ARL13B-203ENST00000394222 2453 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
TMEM35AQ53FP2 AC106820.2-201ENST00000563775 3264 ntBASIC16.3■□□□□ 0.2
TMEM35AQ53FP2 RGS19-202ENST00000395042 1593 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
TMEM35AQ53FP2 SP3-203ENST00000418194 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
TMEM35AQ53FP2 IGSF8-201ENST00000314485 2343 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
TMEM35AQ53FP2 FAM20A-205ENST00000592554 2955 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
TMEM35AQ53FP2 INHA-201ENST00000243786 1468 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
TMEM35AQ53FP2 FAM57B-201ENST00000279389 1481 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
TMEM35AQ53FP2 ACTRT2-201ENST00000378404 1421 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
TMEM35AQ53FP2 XXYLT1-205ENST00000437101 2149 ntTSL 2 BASIC16.3■□□□□ 0.2
TMEM35AQ53FP2 TRA2A-211ENST00000538367 2142 ntAPPRIS ALT2 TSL 2 BASIC16.3■□□□□ 0.2
TMEM35AQ53FP2 TXNL4A-201ENST00000269601 3504 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
TMEM35AQ53FP2 PCDHA13-202ENST00000409494 4884 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
TMEM35AQ53FP2 SEPT2-245ENST00000616972 3446 ntTSL 2 BASIC16.3■□□□□ 0.2
TMEM35AQ53FP2 PTHLH-203ENST00000395872 1318 ntAPPRIS ALT1 TSL 5 BASIC16.3■□□□□ 0.2
TMEM35AQ53FP2 ISCU-205ENST00000535729 1330 ntTSL 2 BASIC16.3■□□□□ 0.2
TMEM35AQ53FP2 CCDC107-201ENST00000327351 804 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
TMEM35AQ53FP2 SDR39U1-201ENST00000399395 1233 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
TMEM35AQ53FP2 ODF3B-202ENST00000401779 869 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
TMEM35AQ53FP2 ODF3B-203ENST00000403326 643 ntTSL 3 BASIC16.3■□□□□ 0.2
TMEM35AQ53FP2 IGF2-206ENST00000418738 934 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
TMEM35AQ53FP2 KRT18P67-201ENST00000432816 1264 ntBASIC16.3■□□□□ 0.2
TMEM35AQ53FP2 PP7080-204ENST00000510714 601 ntTSL 3 BASIC16.3■□□□□ 0.2
TMEM35AQ53FP2 MRPL49-206ENST00000531705 489 ntTSL 5 BASIC16.3■□□□□ 0.2
TMEM35AQ53FP2 AC018529.2-201ENST00000612024 828 ntTSL 4 BASIC16.3■□□□□ 0.2
TMEM35AQ53FP2 TP73-AS1-207ENST00000624167 988 ntBASIC16.3■□□□□ 0.2
TMEM35AQ53FP2 GIT1-203ENST00000394869 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
TMEM35AQ53FP2 LINC01657-201ENST00000457217 1809 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
TMEM35AQ53FP2 RGS14-201ENST00000408923 2415 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
TMEM35AQ53FP2 SLC10A3-202ENST00000369649 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
TMEM35AQ53FP2 ZGLP1-202ENST00000403903 2303 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
TMEM35AQ53FP2 TRAF2-201ENST00000247668 2264 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
TMEM35AQ53FP2 USP13-201ENST00000263966 8323 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
TMEM35AQ53FP2 TNXB-204ENST00000479795 2742 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
TMEM35AQ53FP2 MFSD2A-201ENST00000372809 2173 ntTSL 2 BASIC16.3■□□□□ 0.2
TMEM35AQ53FP2 GMPPA-204ENST00000373908 1501 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
TMEM35AQ53FP2 CSF1-204ENST00000369802 2484 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
TMEM35AQ53FP2 SGCB-201ENST00000381431 4431 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
TMEM35AQ53FP2 AC080080.1-201ENST00000625121 2420 ntBASIC16.29■□□□□ 0.2
TMEM35AQ53FP2 PLEKHF2-201ENST00000315367 2881 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
TMEM35AQ53FP2 SNTG2-202ENST00000407292 1436 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
TMEM35AQ53FP2 CXorf40B-205ENST00000462691 1440 ntAPPRIS ALT1 TSL 3 BASIC16.29■□□□□ 0.2
TMEM35AQ53FP2 ARHGAP9-204ENST00000430041 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
TMEM35AQ53FP2 DNM1-202ENST00000372923 3244 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
TMEM35AQ53FP2 FAM69C-201ENST00000343998 3671 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
TMEM35AQ53FP2 FGFBP1-201ENST00000382333 1359 ntAPPRIS P1 TSL 3 BASIC16.29■□□□□ 0.2
TMEM35AQ53FP2 AC243591.1-201ENST00000452967 1364 ntBASIC16.29■□□□□ 0.2
TMEM35AQ53FP2 AL021920.2-201ENST00000624828 1351 ntBASIC16.29■□□□□ 0.2
TMEM35AQ53FP2 CAP2-202ENST00000378990 1812 ntTSL 2 BASIC16.29■□□□□ 0.2
TMEM35AQ53FP2 SCNN1D-206ENST00000400928 2731 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
TMEM35AQ53FP2 DHCR7-201ENST00000355527 2666 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
TMEM35AQ53FP2 RHBG-204ENST00000537040 1789 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
TMEM35AQ53FP2 GPAT3-202ENST00000395226 2631 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
TMEM35AQ53FP2 ARHGEF4-206ENST00000428230 2172 ntTSL 5 BASIC16.29■□□□□ 0.2
TMEM35AQ53FP2 VAMP5-201ENST00000306384 689 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
TMEM35AQ53FP2 SGF29-201ENST00000317058 1153 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
TMEM35AQ53FP2 RWDD3-202ENST00000370202 1235 ntAPPRIS P1 TSL 3 BASIC16.29■□□□□ 0.2
TMEM35AQ53FP2 OLFM1-207ENST00000371801 568 ntTSL 2 BASIC16.29■□□□□ 0.2
TMEM35AQ53FP2 RPS2P1-201ENST00000434010 821 ntBASIC16.29■□□□□ 0.2
TMEM35AQ53FP2 AC018712.1-201ENST00000455767 687 ntBASIC16.29■□□□□ 0.2
TMEM35AQ53FP2 STK32A-AS1-201ENST00000504297 863 ntTSL 3 BASIC16.29■□□□□ 0.2
TMEM35AQ53FP2 JPH4-203ENST00000544177 1124 ntTSL 2 BASIC16.29■□□□□ 0.2
TMEM35AQ53FP2 TUBB3-205ENST00000554336 903 ntTSL 3 BASIC16.29■□□□□ 0.2
TMEM35AQ53FP2 AL121820.2-201ENST00000556301 279 ntTSL 2 BASIC16.29■□□□□ 0.2
TMEM35AQ53FP2 SPINT1-AS1-203ENST00000565315 629 ntTSL 2 BASIC16.29■□□□□ 0.2
TMEM35AQ53FP2 CALM3-211ENST00000598871 561 ntTSL 4 BASIC16.29■□□□□ 0.2
TMEM35AQ53FP2 GRTP1-205ENST00000620217 1073 ntTSL 2 BASIC16.29■□□□□ 0.2
TMEM35AQ53FP2 AL805961.1-202ENST00000641562 540 ntBASIC16.29■□□□□ 0.2
TMEM35AQ53FP2 AF228730.7-201ENST00000641842 219 ntBASIC16.29■□□□□ 0.2
TMEM35AQ53FP2 MIER1-204ENST00000371012 2420 ntTSL 2 BASIC16.29■□□□□ 0.2
TMEM35AQ53FP2 LINC00894-202ENST00000425602 1597 ntTSL 2 BASIC16.29■□□□□ 0.2
TMEM35AQ53FP2 PTP4A1-201ENST00000370651 5088 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
TMEM35AQ53FP2 UBE3D-203ENST00000369747 1917 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
TMEM35AQ53FP2 ADAMTSL1-202ENST00000327883 1864 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
TMEM35AQ53FP2 DDHD1-201ENST00000323669 5503 ntTSL 2 BASIC16.29■□□□□ 0.2
TMEM35AQ53FP2 TPM1-205ENST00000357980 1800 ntTSL 2 BASIC16.29■□□□□ 0.2
TMEM35AQ53FP2 GATAD2A-202ENST00000360315 5671 ntAPPRIS P3 TSL 5 BASIC16.28■□□□□ 0.2
TMEM35AQ53FP2 CCDC112-205ENST00000506442 2145 ntAPPRIS ALT2 TSL 2 BASIC16.28■□□□□ 0.2
TMEM35AQ53FP2 SEMA3B-204ENST00000433753 2755 ntAPPRIS ALT1 TSL 1 (best) BASIC16.28■□□□□ 0.2
TMEM35AQ53FP2 KRT84-201ENST00000257951 2092 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
TMEM35AQ53FP2 AC012313.1-201ENST00000593393 3059 ntBASIC16.28■□□□□ 0.2
TMEM35AQ53FP2 LTBP4-205ENST00000396819 4764 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
TMEM35AQ53FP2 THEM4-201ENST00000368814 2377 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
TMEM35AQ53FP2 LGALS12-201ENST00000255684 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
TMEM35AQ53FP2 PITHD1-201ENST00000246151 1603 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
TMEM35AQ53FP2 SPSB4-201ENST00000310546 2908 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
TMEM35AQ53FP2 TIMM50-202ENST00000544017 2572 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
TMEM35AQ53FP2 MED22-202ENST00000371999 987 ntTSL 3 BASIC16.28■□□□□ 0.2
TMEM35AQ53FP2 KRT18P27-201ENST00000427733 1299 ntBASIC16.28■□□□□ 0.2
TMEM35AQ53FP2 C1orf109-203ENST00000464085 919 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
TMEM35AQ53FP2 TCTN1-208ENST00000471804 718 ntTSL 3 BASIC16.28■□□□□ 0.2
TMEM35AQ53FP2 ACP6-203ENST00000487562 1258 ntTSL 5 BASIC16.28■□□□□ 0.2
TMEM35AQ53FP2 RAP1B-228ENST00000542145 1060 ntTSL 2 BASIC16.28■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 37.5 ms