Protein–RNA interactions for Protein: Q494W8

CHRFAM7A, CHRNA7-FAM7A fusion protein, humanhuman

Predictions only

Length 412 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRFAM7AQ494W8 RNA5SP419-201ENST00000515908 135 ntBASIC15.09■□□□□ 0.01
CHRFAM7AQ494W8 MAP1LC3B-207ENST00000565788 625 ntTSL 2 BASIC15.09■□□□□ 0.01
CHRFAM7AQ494W8 YPEL3-209ENST00000566595 796 ntAPPRIS P1 TSL 2 BASIC15.09■□□□□ 0.01
CHRFAM7AQ494W8 AC011840.4-201ENST00000578471 627 ntBASIC15.09■□□□□ 0.01
CHRFAM7AQ494W8 AC107896.1-201ENST00000593212 548 ntTSL 4 BASIC15.09■□□□□ 0.01
CHRFAM7AQ494W8 CAND2-206ENST00000626378 333 ntTSL 5 BASIC15.09■□□□□ 0.01
CHRFAM7AQ494W8 ACBD3-201ENST00000366812 3573 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
CHRFAM7AQ494W8 CPT2-210ENST00000637252 2739 ntTSL 5 BASIC15.09■□□□□ 0.01
CHRFAM7AQ494W8 ATP1B1-201ENST00000367815 1883 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
CHRFAM7AQ494W8 RDH10-201ENST00000240285 3949 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
CHRFAM7AQ494W8 EPN2-201ENST00000314728 4871 ntAPPRIS P4 TSL 1 (best) BASIC15.09■□□□□ 0.01
CHRFAM7AQ494W8 CHST3-201ENST00000373115 6970 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
CHRFAM7AQ494W8 GSR-201ENST00000221130 3119 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
CHRFAM7AQ494W8 AC100803.2-201ENST00000562459 1963 ntBASIC15.09■□□□□ 0.01
CHRFAM7AQ494W8 SLC22A18AS-203ENST00000625099 1659 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
CHRFAM7AQ494W8 PAPD5-203ENST00000561678 2916 ntTSL 5 BASIC15.09■□□□□ 0.01
CHRFAM7AQ494W8 ICMT-201ENST00000343813 4771 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
CHRFAM7AQ494W8 SPDYE5-203ENST00000625065 1700 ntAPPRIS P2 TSL 5 BASIC15.09■□□□□ 0.01
CHRFAM7AQ494W8 CXorf40B-205ENST00000462691 1440 ntAPPRIS ALT1 TSL 3 BASIC15.09■□□□□ 0.01
CHRFAM7AQ494W8 MIB2-232ENST00000520777 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
CHRFAM7AQ494W8 ARHGAP4-204ENST00000393721 2721 ntTSL 5 BASIC15.08■□□□□ 0.01
CHRFAM7AQ494W8 ANKRD26-201ENST00000376087 6591 ntAPPRIS P2 TSL 5 BASIC15.08■□□□□ 0.01
CHRFAM7AQ494W8 DDX28-201ENST00000332395 2169 ntAPPRIS P1 BASIC15.08■□□□□ 0.01
CHRFAM7AQ494W8 MYH14-210ENST00000601313 6896 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0.01
CHRFAM7AQ494W8 CPZ-203ENST00000382480 2538 ntTSL 1 (best) BASIC15.08■□□□□ 0.01
CHRFAM7AQ494W8 ARHGEF28-201ENST00000296794 5246 ntTSL 5 BASIC15.08■□□□□ 0.01
CHRFAM7AQ494W8 LGI4-202ENST00000392225 2891 ntTSL 5 BASIC15.08■□□□□ 0.01
CHRFAM7AQ494W8 PROK2-202ENST00000353065 1549 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
CHRFAM7AQ494W8 DNAAF4-202ENST00000348518 1897 ntAPPRIS P1 TSL 5 BASIC15.08■□□□□ 0.01
CHRFAM7AQ494W8 KDM4B-203ENST00000536461 5027 ntTSL 1 (best) BASIC15.08■□□□□ 0
CHRFAM7AQ494W8 USP42-201ENST00000306177 5155 ntAPPRIS P1 TSL 5 BASIC15.08■□□□□ 0
CHRFAM7AQ494W8 HCFC1-201ENST00000310441 8869 ntAPPRIS P2 TSL 1 (best) BASIC15.08■□□□□ 0
CHRFAM7AQ494W8 SCT-201ENST00000176195 366 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
CHRFAM7AQ494W8 SBSPON-201ENST00000297354 3801 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
CHRFAM7AQ494W8 KAZN-201ENST00000361144 3838 ntTSL 1 (best) BASIC15.08■□□□□ 0
CHRFAM7AQ494W8 TSTD1-203ENST00000368024 457 ntTSL 2 BASIC15.08■□□□□ 0
CHRFAM7AQ494W8 MPIG6B-202ENST00000375805 668 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0
CHRFAM7AQ494W8 FAM3A-205ENST00000393572 1041 ntTSL 2 BASIC15.08■□□□□ 0
CHRFAM7AQ494W8 FABP5-202ENST00000396359 986 ntTSL 5 BASIC15.08■□□□□ 0
CHRFAM7AQ494W8 CT47A11-201ENST00000457020 1294 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
CHRFAM7AQ494W8 SMAD3-210ENST00000559092 584 ntTSL 4 BASIC15.08■□□□□ 0
CHRFAM7AQ494W8 MIR3180-4-201ENST00000582223 153 ntBASIC15.08■□□□□ 0
CHRFAM7AQ494W8 AC011511.2-201ENST00000592893 918 ntTSL 3 BASIC15.08■□□□□ 0
CHRFAM7AQ494W8 IGHV3OR16-7-201ENST00000604106 360 ntBASIC15.08■□□□□ 0
CHRFAM7AQ494W8 FAM72C-201ENST00000369175 1658 ntTSL 1 (best) BASIC15.08■□□□□ 0
CHRFAM7AQ494W8 FAM72B-207ENST00000619376 1659 ntTSL 1 (best) BASIC15.08■□□□□ 0
CHRFAM7AQ494W8 KCNJ2-AS1-201ENST00000590966 2442 ntBASIC15.08■□□□□ 0
CHRFAM7AQ494W8 IL4I1-204ENST00000595948 2407 ntAPPRIS P4 TSL 1 (best) BASIC15.08■□□□□ 0
CHRFAM7AQ494W8 EWSR1-222ENST00000629659 2446 ntTSL 5 BASIC15.08■□□□□ 0
CHRFAM7AQ494W8 TBC1D2-202ENST00000375063 2100 ntTSL 1 (best) BASIC15.08■□□□□ 0
CHRFAM7AQ494W8 RNF168-201ENST00000318037 5347 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
CHRFAM7AQ494W8 SLC7A9-204ENST00000590341 1752 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
CHRFAM7AQ494W8 SHTN1-203ENST00000392901 2190 ntAPPRIS ALT2 TSL 2 BASIC15.08■□□□□ 0
CHRFAM7AQ494W8 NBL1-210ENST00000615215 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0
CHRFAM7AQ494W8 DNAJA3-202ENST00000355296 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC15.08■□□□□ 0
CHRFAM7AQ494W8 CBLC-202ENST00000341505 1441 ntTSL 1 (best) BASIC15.08■□□□□ 0
CHRFAM7AQ494W8 CXXC1P1-201ENST00000483225 1897 ntTSL 2 BASIC15.08■□□□□ 0
CHRFAM7AQ494W8 ACD-215ENST00000620761 1483 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0
CHRFAM7AQ494W8 C11orf58-201ENST00000228136 2049 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
CHRFAM7AQ494W8 AC020661.1-201ENST00000503052 1584 ntTSL 1 (best) BASIC15.07■□□□□ 0
CHRFAM7AQ494W8 AC063926.3-201ENST00000624734 5658 ntBASIC15.07■□□□□ 0
CHRFAM7AQ494W8 ZBTB45-202ENST00000594051 2541 ntAPPRIS P1 TSL 2 BASIC15.07■□□□□ 0
CHRFAM7AQ494W8 NKX2-2-201ENST00000377142 2092 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
CHRFAM7AQ494W8 ACP5-201ENST00000218758 1630 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
CHRFAM7AQ494W8 LRRC23-209ENST00000443597 1628 ntAPPRIS P4 TSL 1 (best) BASIC15.07■□□□□ 0
CHRFAM7AQ494W8 KLC2-203ENST00000394066 2591 ntTSL 2 BASIC15.07■□□□□ 0
CHRFAM7AQ494W8 SOCS2-AS1-202ENST00000500986 1655 ntTSL 2 BASIC15.07■□□□□ 0
CHRFAM7AQ494W8 NUMBL-207ENST00000598779 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
CHRFAM7AQ494W8 PCDH19-202ENST00000373034 9756 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
CHRFAM7AQ494W8 IFRD1-202ENST00000403825 2290 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
CHRFAM7AQ494W8 ITGB2-AS1-202ENST00000441379 2282 ntTSL 1 (best) BASIC15.07■□□□□ 0
CHRFAM7AQ494W8 DGUOK-201ENST00000264093 1144 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
CHRFAM7AQ494W8 ZNHIT1-201ENST00000305105 1225 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
CHRFAM7AQ494W8 DGUOK-202ENST00000348222 880 ntTSL 2 BASIC15.07■□□□□ 0
CHRFAM7AQ494W8 ARMC12-202ENST00000373866 1254 ntAPPRIS P1 TSL 3 BASIC15.07■□□□□ 0
CHRFAM7AQ494W8 IGHGP-201ENST00000390555 1178 ntBASIC15.07■□□□□ 0
CHRFAM7AQ494W8 IGHV3-15-201ENST00000390603 437 ntAPPRIS P1 BASIC15.07■□□□□ 0
CHRFAM7AQ494W8 PTTG1-202ENST00000393964 1070 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
CHRFAM7AQ494W8 AP001062.3-201ENST00000422357 704 ntTSL 2 BASIC15.07■□□□□ 0
CHRFAM7AQ494W8 SMN1-203ENST00000503079 1219 ntTSL 5 BASIC15.07■□□□□ 0
CHRFAM7AQ494W8 AL591684.3-201ENST00000605187 298 ntBASIC15.07■□□□□ 0
CHRFAM7AQ494W8 DNASE1L2-206ENST00000613572 1260 ntAPPRIS P1 TSL 5 BASIC15.07■□□□□ 0
CHRFAM7AQ494W8 AC116407.2-201ENST00000613639 860 ntBASIC15.07■□□□□ 0
CHRFAM7AQ494W8 DGUOK-208ENST00000629438 1029 ntTSL 1 (best) BASIC15.07■□□□□ 0
CHRFAM7AQ494W8 AL161669.4-201ENST00000634353 732 ntAPPRIS P1 TSL 2 BASIC15.07■□□□□ 0
CHRFAM7AQ494W8 ELMSAN1-201ENST00000286523 8091 ntAPPRIS P2 TSL 1 (best) BASIC15.07■□□□□ 0
CHRFAM7AQ494W8 AC133561.2-201ENST00000380145 1802 ntTSL 2 BASIC15.07■□□□□ 0
CHRFAM7AQ494W8 DMKN-201ENST00000339686 1927 ntAPPRIS P3 TSL 1 (best) BASIC15.07■□□□□ 0
CHRFAM7AQ494W8 HMGN1-204ENST00000380749 1383 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
CHRFAM7AQ494W8 BATF2-202ENST00000435842 1949 ntTSL 1 (best) BASIC15.07■□□□□ 0
CHRFAM7AQ494W8 FBXO18-203ENST00000397269 3640 ntTSL 5 BASIC15.07■□□□□ 0
CHRFAM7AQ494W8 POMC-204ENST00000405623 1426 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
CHRFAM7AQ494W8 COL17A1-202ENST00000369733 5488 ntAPPRIS ALT2 TSL 5 BASIC15.07■□□□□ 0
CHRFAM7AQ494W8 TBL2-201ENST00000305632 3161 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
CHRFAM7AQ494W8 SPACA1-201ENST00000237201 1499 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
CHRFAM7AQ494W8 AC069281.2-201ENST00000485071 4401 ntTSL 2 BASIC15.07■□□□□ 0
CHRFAM7AQ494W8 PBK-203ENST00000522944 1499 ntTSL 2 BASIC15.07■□□□□ 0
CHRFAM7AQ494W8 RTKN2-203ENST00000395260 2076 ntTSL 1 (best) BASIC15.07■□□□□ 0
CHRFAM7AQ494W8 TNRC18P3-201ENST00000441896 2691 ntBASIC15.07■□□□□ 0
CHRFAM7AQ494W8 GSK3B-201ENST00000264235 7711 ntAPPRIS ALT1 TSL 1 (best) BASIC15.07■□□□□ 0
Retrieved 100 of 98,524 protein–RNA pairs in 37.8 ms