Protein–RNA interactions for Protein: P98160

HSPG2, Basement membrane-specific heparan sulfate proteoglycan core protein, humanhuman

Predictions only

Length 4,391 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2P98160 TPD52L1-202ENST00000368388 2147 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
HSPG2P98160 FXYD6-211ENST00000539526 2132 ntAPPRIS P2 TSL 1 (best) BASIC10.45□□□□□ -0.74
HSPG2P98160 TMEM5-205ENST00000537373 1966 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
HSPG2P98160 MIOX-202ENST00000395732 1658 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
HSPG2P98160 CHEK1-202ENST00000427383 1670 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
HSPG2P98160 CRLF3-201ENST00000324238 2957 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
HSPG2P98160 MFSD1-219ENST00000622669 2361 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
HSPG2P98160 LTBP3-217ENST00000530785 2461 ntTSL 2 BASIC10.45□□□□□ -0.74
HSPG2P98160 JAKMIP1-201ENST00000282924 2585 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
HSPG2P98160 TXNDC2-204ENST00000536353 1703 ntTSL 5 BASIC10.45□□□□□ -0.74
HSPG2P98160 DRGX-202ENST00000434016 955 ntAPPRIS P1 TSL 5 BASIC10.45□□□□□ -0.74
HSPG2P98160 AC253536.4-201ENST00000440539 267 ntBASIC10.45□□□□□ -0.74
HSPG2P98160 RPS2P36-201ENST00000456516 831 ntBASIC10.45□□□□□ -0.74
HSPG2P98160 AC074194.1-201ENST00000505025 622 ntTSL 4 BASIC10.45□□□□□ -0.74
HSPG2P98160 AC019257.1-202ENST00000521498 445 ntTSL 5 BASIC10.45□□□□□ -0.74
HSPG2P98160 NR2C2AP-204ENST00000538165 891 ntTSL 2 BASIC10.45□□□□□ -0.74
HSPG2P98160 PDCD10-201ENST00000392750 2067 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
HSPG2P98160 ZNF517-201ENST00000359971 2335 ntAPPRIS P1 TSL 4 BASIC10.45□□□□□ -0.74
HSPG2P98160 MTDH-203ENST00000519934 2184 ntTSL 5 BASIC10.45□□□□□ -0.74
HSPG2P98160 ABHD18-206ENST00000611882 1493 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
HSPG2P98160 CEP19-202ENST00000409690 2201 ntAPPRIS P2 TSL 1 (best) BASIC10.45□□□□□ -0.74
HSPG2P98160 FADS1-204ENST00000433932 1690 ntTSL 2 BASIC10.45□□□□□ -0.74
HSPG2P98160 TRAM1L1-201ENST00000310754 2023 ntAPPRIS P1 BASIC10.45□□□□□ -0.74
HSPG2P98160 AL031598.1-201ENST00000561511 1773 ntBASIC10.45□□□□□ -0.74
HSPG2P98160 LIPE-AS1-201ENST00000457234 1501 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
HSPG2P98160 CCDC88B-201ENST00000301897 870 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
HSPG2P98160 SPATC1L-202ENST00000330205 1182 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
HSPG2P98160 RAB34-206ENST00000415040 1293 ntTSL 2 BASIC10.45□□□□□ -0.74
HSPG2P98160 AL589987.1-201ENST00000453380 819 ntBASIC10.45□□□□□ -0.74
HSPG2P98160 FO681548.1-201ENST00000455617 1132 ntBASIC10.45□□□□□ -0.74
HSPG2P98160 TMEM14B-220ENST00000612333 888 ntTSL 3 BASIC10.45□□□□□ -0.74
HSPG2P98160 LAMTOR5-208ENST00000614544 846 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
HSPG2P98160 CDIP1-206ENST00000563507 1463 ntTSL 2 BASIC10.45□□□□□ -0.74
HSPG2P98160 SUSD4-208ENST00000494793 1833 ntTSL 5 BASIC10.45□□□□□ -0.74
HSPG2P98160 ACSM2B-208ENST00000565322 1834 ntTSL 2 BASIC10.45□□□□□ -0.74
HSPG2P98160 ZNF394-201ENST00000337673 2179 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
HSPG2P98160 NFIC-201ENST00000341919 1573 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
HSPG2P98160 RAD51D-218ENST00000590016 1528 ntTSL 2 BASIC10.45□□□□□ -0.74
HSPG2P98160 BAG5-202ENST00000337322 1960 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
HSPG2P98160 TRABD-203ENST00000395827 2172 ntAPPRIS P3 TSL 5 BASIC10.45□□□□□ -0.74
HSPG2P98160 RHCE-205ENST00000349438 1235 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
HSPG2P98160 AL121983.1-201ENST00000424181 335 ntTSL 2 BASIC10.44□□□□□ -0.74
HSPG2P98160 AL353747.3-201ENST00000454185 579 ntTSL 3 BASIC10.44□□□□□ -0.74
HSPG2P98160 CARNS1-205ENST00000531040 2968 ntTSL 5 BASIC10.44□□□□□ -0.74
HSPG2P98160 LSP1-201ENST00000311604 1699 ntAPPRIS P4 TSL 1 (best) BASIC10.44□□□□□ -0.74
HSPG2P98160 GTF2H4-202ENST00000376316 1673 ntAPPRIS P1 TSL 5 BASIC10.44□□□□□ -0.74
HSPG2P98160 HMCES-201ENST00000383463 2515 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
HSPG2P98160 WBP2-219ENST00000626827 1867 ntTSL 5 BASIC10.44□□□□□ -0.74
HSPG2P98160 TMPRSS5-205ENST00000538955 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC10.44□□□□□ -0.74
HSPG2P98160 CLDND1-204ENST00000394185 2159 ntAPPRIS P1 TSL 5 BASIC10.44□□□□□ -0.74
HSPG2P98160 CYTH1-209ENST00000589296 2159 ntTSL 5 BASIC10.44□□□□□ -0.74
HSPG2P98160 KLHL33-202ENST00000636854 2394 ntAPPRIS P1 TSL 5 BASIC10.44□□□□□ -0.74
HSPG2P98160 NRN1L-201ENST00000339176 710 ntAPPRIS P2 TSL 1 (best) BASIC10.44□□□□□ -0.74
HSPG2P98160 CFLAR-203ENST00000341222 1283 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
HSPG2P98160 AL162742.1-201ENST00000434792 954 ntTSL 2 BASIC10.44□□□□□ -0.74
HSPG2P98160 VCX3B-204ENST00000453306 868 ntAPPRIS ALT2 TSL 5 BASIC10.44□□□□□ -0.74
HSPG2P98160 ROPN1B-210ENST00000514116 1088 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
HSPG2P98160 AC105129.2-201ENST00000559536 390 ntBASIC10.44□□□□□ -0.74
HSPG2P98160 AP001005.4-201ENST00000572530 387 ntTSL 3 BASIC10.44□□□□□ -0.74
HSPG2P98160 AC091271.1-201ENST00000611877 1162 ntBASIC10.44□□□□□ -0.74
HSPG2P98160 AL035456.1-201ENST00000456064 1369 ntBASIC10.44□□□□□ -0.74
HSPG2P98160 FAM57B-201ENST00000279389 1481 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
HSPG2P98160 ARRB1-201ENST00000360025 1895 ntAPPRIS P3 TSL 1 (best) BASIC10.44□□□□□ -0.74
HSPG2P98160 MOGS-201ENST00000233616 2895 ntAPPRIS P3 TSL 1 (best) BASIC10.44□□□□□ -0.74
HSPG2P98160 LINC01657-201ENST00000457217 1809 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
HSPG2P98160 LGALS9C-201ENST00000328114 1730 ntAPPRIS P2 TSL 1 (best) BASIC10.44□□□□□ -0.74
HSPG2P98160 SLC16A5-202ENST00000450736 2051 ntAPPRIS P2 TSL 1 (best) BASIC10.44□□□□□ -0.74
HSPG2P98160 EIF5A-206ENST00000571955 1366 ntAPPRIS P1 TSL 5 BASIC10.44□□□□□ -0.74
HSPG2P98160 RPS19-201ENST00000221975 500 ntTSL 3 BASIC10.44□□□□□ -0.74
HSPG2P98160 AC091046.1-201ENST00000331871 207 ntBASIC10.44□□□□□ -0.74
HSPG2P98160 APOC3-202ENST00000375345 604 ntTSL 5 BASIC10.44□□□□□ -0.74
HSPG2P98160 IGFALS-202ENST00000415638 2136 ntTSL 2 BASIC10.44□□□□□ -0.74
HSPG2P98160 FLJ27354-203ENST00000526694 851 ntTSL 2 BASIC10.44□□□□□ -0.74
HSPG2P98160 AGER-214ENST00000538695 487 ntTSL 2 BASIC10.44□□□□□ -0.74
HSPG2P98160 RPS19-202ENST00000593863 526 ntAPPRIS P1 TSL 3 BASIC10.44□□□□□ -0.74
HSPG2P98160 MIR8072-201ENST00000614241 80 ntBASIC10.44□□□□□ -0.74
HSPG2P98160 NDUFB1-207ENST00000617122 417 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
HSPG2P98160 AGER-215ENST00000620802 737 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
HSPG2P98160 AC244517.4-201ENST00000624549 580 ntTSL 4 BASIC10.44□□□□□ -0.74
HSPG2P98160 GFI1-203ENST00000427103 2693 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
HSPG2P98160 RDH8-203ENST00000591589 1715 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
HSPG2P98160 JPT1-209ENST00000482348 1614 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
HSPG2P98160 SHOX-201ENST00000334060 1951 ntTSL 5 BASIC10.44□□□□□ -0.74
HSPG2P98160 SLC23A3-207ENST00000455516 2048 ntTSL 2 BASIC10.44□□□□□ -0.74
HSPG2P98160 TGDS-201ENST00000261296 1905 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
HSPG2P98160 ZUFSP-201ENST00000368573 1225 ntTSL 5 BASIC10.44□□□□□ -0.74
HSPG2P98160 ITPA-201ENST00000380113 1185 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
HSPG2P98160 LBH-202ENST00000401506 485 ntTSL 3 BASIC10.44□□□□□ -0.74
HSPG2P98160 MDM2-215ENST00000428863 1037 ntTSL 5 BASIC10.44□□□□□ -0.74
HSPG2P98160 SNRPB-202ENST00000438552 1008 ntAPPRIS P4 TSL 1 (best) BASIC10.44□□□□□ -0.74
HSPG2P98160 AAAS-217ENST00000550286 1652 ntTSL 5 BASIC10.44□□□□□ -0.74
HSPG2P98160 TDRKH-202ENST00000368823 2751 ntAPPRIS ALT1 TSL 2 BASIC10.43□□□□□ -0.74
HSPG2P98160 FAM131A-202ENST00000340957 2421 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
HSPG2P98160 ZNF12-201ENST00000342651 2921 ntAPPRIS ALT2 TSL 2 BASIC10.43□□□□□ -0.74
HSPG2P98160 PPOX-202ENST00000367999 1740 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
HSPG2P98160 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
HSPG2P98160 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
HSPG2P98160 FAM13C-204ENST00000468840 2110 ntAPPRIS ALT2 TSL 2 BASIC10.43□□□□□ -0.74
HSPG2P98160 HOPX-203ENST00000381255 1164 ntAPPRIS P1 TSL 2 BASIC10.43□□□□□ -0.74
HSPG2P98160 HRAS-202ENST00000397594 1099 ntTSL 2 BASIC10.43□□□□□ -0.74
Retrieved 100 of 98,524 protein–RNA pairs in 39.4 ms