Protein–RNA interactions for Protein: P84243

H3F3A, Histone H3.3, humanhuman

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3AP84243 SMOX-205ENST00000379460 2230 ntAPPRIS P1 TSL 2 BASIC15.35■□□□□ 0.05
H3F3AP84243 OSBPL9-222ENST00000531828 2210 ntTSL 5 BASIC15.35■□□□□ 0.05
H3F3AP84243 LTBR-207ENST00000539925 1665 ntAPPRIS ALT2 TSL 2 BASIC15.35■□□□□ 0.05
H3F3AP84243 STX17-205ENST00000525640 2523 ntAPPRIS P1 TSL 2 BASIC15.35■□□□□ 0.05
H3F3AP84243 LMCD1-204ENST00000426878 1431 ntTSL 2 BASIC15.34■□□□□ 0.05
H3F3AP84243 AC010186.2-201ENST00000575094 2612 ntTSL 2 BASIC15.34■□□□□ 0.05
H3F3AP84243 LINC01148-201ENST00000557527 1763 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
H3F3AP84243 GMPPA-204ENST00000373908 1501 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
H3F3AP84243 SEPT2-245ENST00000616972 3446 ntTSL 2 BASIC15.34■□□□□ 0.05
H3F3AP84243 EXOSC4-201ENST00000316052 887 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
H3F3AP84243 SMIM29-201ENST00000335352 1160 ntTSL 2 BASIC15.34■□□□□ 0.05
H3F3AP84243 CD1E-209ENST00000368164 869 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
H3F3AP84243 INIP-202ENST00000374236 874 ntTSL 2 BASIC15.34■□□□□ 0.05
H3F3AP84243 AP002414.1-201ENST00000391405 1147 ntBASIC15.34■□□□□ 0.05
H3F3AP84243 RAB24-204ENST00000393611 1236 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
H3F3AP84243 ELK2BP-201ENST00000415014 1224 ntBASIC15.34■□□□□ 0.05
H3F3AP84243 DHRS12-203ENST00000444610 1162 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
H3F3AP84243 MAGI2-AS3-208ENST00000446159 670 ntTSL 3 BASIC15.34■□□□□ 0.05
H3F3AP84243 PQLC2L-205ENST00000461040 563 ntAPPRIS ALT2 TSL 3 BASIC15.34■□□□□ 0.05
H3F3AP84243 EEF1D-238ENST00000531621 840 ntTSL 3 BASIC15.34■□□□□ 0.05
H3F3AP84243 AK2-210ENST00000548033 936 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
H3F3AP84243 TERC-201ENST00000602385 541 ntBASIC15.34■□□□□ 0.05
H3F3AP84243 AL805961.1-202ENST00000641562 540 ntBASIC15.34■□□□□ 0.05
H3F3AP84243 CDH24-201ENST00000267383 2873 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
H3F3AP84243 SLC3A2-201ENST00000338663 1904 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
H3F3AP84243 CLN6-202ENST00000538696 1343 ntTSL 2 BASIC15.34■□□□□ 0.05
H3F3AP84243 HNRNPRP1-201ENST00000453465 1695 ntBASIC15.34■□□□□ 0.05
H3F3AP84243 COTL1-203ENST00000564057 1677 ntTSL 5 BASIC15.34■□□□□ 0.05
H3F3AP84243 AC027796.3-201ENST00000572919 4753 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
H3F3AP84243 RGS11-203ENST00000359740 1371 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
H3F3AP84243 AFMID-201ENST00000327898 1700 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
H3F3AP84243 UNC119-204ENST00000470125 2050 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
H3F3AP84243 KIAA1147-202ENST00000536163 7296 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
H3F3AP84243 OR2C3-203ENST00000617752 2481 ntAPPRIS P1 BASIC15.34■□□□□ 0.05
H3F3AP84243 PLCH2-203ENST00000378486 4837 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
H3F3AP84243 PLCH2-204ENST00000419816 4837 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.05
H3F3AP84243 TNIP1-221ENST00000610874 2629 ntTSL 5 BASIC15.33■□□□□ 0.05
H3F3AP84243 CLDN7-201ENST00000360325 1542 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
H3F3AP84243 FRMD8P1-201ENST00000440433 1524 ntBASIC15.33■□□□□ 0.05
H3F3AP84243 CREB3L1-206ENST00000621158 2687 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
H3F3AP84243 ILF3-203ENST00000449870 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.05
H3F3AP84243 AC092053.1-201ENST00000605787 1936 ntBASIC15.33■□□□□ 0.05
H3F3AP84243 FGFR4-203ENST00000393648 2733 ntAPPRIS ALT2 TSL 2 BASIC15.33■□□□□ 0.05
H3F3AP84243 GAREM2-202ENST00000407684 5138 ntTSL 2 BASIC15.33■□□□□ 0.05
H3F3AP84243 ATXN7-210ENST00000487717 3683 ntAPPRIS P3 TSL 5 BASIC15.33■□□□□ 0.04
H3F3AP84243 AC005920.1-201ENST00000501718 2054 ntTSL 2 BASIC15.33■□□□□ 0.04
H3F3AP84243 ALDH3B1-208ENST00000617288 2078 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
H3F3AP84243 DHDH-201ENST00000221403 1081 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
H3F3AP84243 SGF29-201ENST00000317058 1153 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
H3F3AP84243 LYPLA2-204ENST00000374505 907 ntTSL 3 BASIC15.33■□□□□ 0.04
H3F3AP84243 PTCHD3P3-201ENST00000403073 906 ntBASIC15.33■□□□□ 0.04
H3F3AP84243 ODF3B-205ENST00000428989 762 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
H3F3AP84243 PAWRP1-201ENST00000451083 565 ntBASIC15.33■□□□□ 0.04
H3F3AP84243 CUTA-210ENST00000488034 769 ntAPPRIS ALT1 TSL 2 BASIC15.33■□□□□ 0.04
H3F3AP84243 AC136632.2-201ENST00000512891 861 ntBASIC15.33■□□□□ 0.04
H3F3AP84243 RNASEK-203ENST00000549393 783 ntTSL 3 BASIC15.33■□□□□ 0.04
H3F3AP84243 AL162171.1-201ENST00000556328 718 ntTSL 3 BASIC15.33■□□□□ 0.04
H3F3AP84243 AC116612.1-201ENST00000557144 562 ntTSL 3 BASIC15.33■□□□□ 0.04
H3F3AP84243 AL450267.1-201ENST00000557174 520 ntTSL 5 BASIC15.33■□□□□ 0.04
H3F3AP84243 AP001005.1-201ENST00000571755 1248 ntBASIC15.33■□□□□ 0.04
H3F3AP84243 PRKN-208ENST00000610470 531 ntTSL 2 BASIC15.33■□□□□ 0.04
H3F3AP84243 PRKN-209ENST00000612485 225 ntTSL 5 BASIC15.33■□□□□ 0.04
H3F3AP84243 AC243547.2-201ENST00000616257 234 ntTSL 3 BASIC15.33■□□□□ 0.04
H3F3AP84243 HIST1H2AK-201ENST00000618958 393 ntAPPRIS P1 BASIC15.33■□□□□ 0.04
H3F3AP84243 ATP6AP2-220ENST00000636970 1187 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.04
H3F3AP84243 PGM5P2-202ENST00000637225 1043 ntBASIC15.33■□□□□ 0.04
H3F3AP84243 TSPY4-205ENST00000640033 663 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.04
H3F3AP84243 RAB22A-201ENST00000244040 8670 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
H3F3AP84243 TBX6-203ENST00000553607 2162 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
H3F3AP84243 PROC-201ENST00000234071 1773 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
H3F3AP84243 RASL10B-201ENST00000603017 3205 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
H3F3AP84243 SPATC1L-201ENST00000291672 2303 ntAPPRIS P1 TSL 2 BASIC15.33■□□□□ 0.04
H3F3AP84243 SPDEF-201ENST00000374037 1895 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.04
H3F3AP84243 CMIP-201ENST00000398040 2825 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
H3F3AP84243 MBL1P-201ENST00000480805 1424 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
H3F3AP84243 TCEA1-208ENST00000521604 2858 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
H3F3AP84243 COL4A2-201ENST00000360467 6281 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.04
H3F3AP84243 RCC1-202ENST00000373832 2424 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
H3F3AP84243 RIC8B-203ENST00000392839 2440 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.04
H3F3AP84243 ZNF618-203ENST00000374126 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
H3F3AP84243 LRFN3-201ENST00000246529 2513 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
H3F3AP84243 CPZ-203ENST00000382480 2538 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
H3F3AP84243 CDIPT-209ENST00000569956 1532 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.04
H3F3AP84243 BFSP1-201ENST00000377868 2063 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
H3F3AP84243 SDCBP-202ENST00000413219 2086 ntAPPRIS P3 TSL 2 BASIC15.32■□□□□ 0.04
H3F3AP84243 ULK3-201ENST00000440863 2623 ntAPPRIS P3 TSL 2 BASIC15.32■□□□□ 0.04
H3F3AP84243 STX3-203ENST00000529177 1571 ntTSL 2 BASIC15.32■□□□□ 0.04
H3F3AP84243 ADAM23-201ENST00000264377 6330 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
H3F3AP84243 WWTR1-201ENST00000360632 2103 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
H3F3AP84243 PITHD1-201ENST00000246151 1603 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
H3F3AP84243 DPEP1-203ENST00000421184 1647 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
H3F3AP84243 TCEA1-201ENST00000396401 2718 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
H3F3AP84243 PML-220ENST00000569477 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
H3F3AP84243 ADM5-201ENST00000420022 1718 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
H3F3AP84243 VSIG10L2-202ENST00000638636 2304 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
H3F3AP84243 PFKL-201ENST00000349048 2912 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
H3F3AP84243 DDX19B-207ENST00000563206 1765 ntTSL 5 BASIC15.32■□□□□ 0.04
H3F3AP84243 ZSCAN10-202ENST00000538082 2350 ntTSL 4 BASIC15.32■□□□□ 0.04
H3F3AP84243 ABHD3-209ENST00000580981 1836 ntTSL 5 BASIC15.32■□□□□ 0.04
H3F3AP84243 TMEM59-202ENST00000371337 600 ntTSL 2 BASIC15.32■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 36.7 ms