Protein–RNA interactions for Protein: P78357

CNTNAP1, Contactin-associated protein 1, humanhuman

Predictions only

Length 1,384 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP1P78357 HLA-DPB2-205ENST00000435074 1188 ntBASIC20.22■□□□□ 0.83
CNTNAP1P78357 AL606760.1-201ENST00000458151 1181 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
CNTNAP1P78357 AC012574.2-201ENST00000520375 443 ntTSL 3 BASIC20.22■□□□□ 0.83
CNTNAP1P78357 AL139349.1-201ENST00000530479 577 ntTSL 4 BASIC20.22■□□□□ 0.83
CNTNAP1P78357 AC084125.2-203ENST00000532766 821 ntTSL 3 BASIC20.22■□□□□ 0.83
CNTNAP1P78357 AC106886.1-201ENST00000568660 600 ntBASIC20.22■□□□□ 0.83
CNTNAP1P78357 AC116003.1-201ENST00000578340 536 ntTSL 3 BASIC20.22■□□□□ 0.83
CNTNAP1P78357 COQ4-205ENST00000609948 956 ntTSL 2 BASIC20.22■□□□□ 0.83
CNTNAP1P78357 ACP5-212ENST00000592828 1699 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
CNTNAP1P78357 USP3-AS1-201ENST00000558831 1784 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
CNTNAP1P78357 FERMT2-204ENST00000399304 2082 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
CNTNAP1P78357 FBXL15-201ENST00000224862 2362 ntAPPRIS P2 TSL 1 (best) BASIC20.22■□□□□ 0.83
CNTNAP1P78357 EGFL6-201ENST00000361306 2398 ntAPPRIS P3 TSL 1 (best) BASIC20.22■□□□□ 0.83
CNTNAP1P78357 MFSD2B-202ENST00000406420 1528 ntAPPRIS P2 TSL 5 BASIC20.22■□□□□ 0.83
CNTNAP1P78357 NGFR-202ENST00000504201 1840 ntTSL 2 BASIC20.22■□□□□ 0.83
CNTNAP1P78357 ATP6AP2-224ENST00000637327 1929 ntAPPRIS ALT2 TSL 2 BASIC20.22■□□□□ 0.83
CNTNAP1P78357 SLC6A7-203ENST00000524041 2431 ntTSL 5 BASIC20.22■□□□□ 0.83
CNTNAP1P78357 GORASP1-206ENST00000422110 2523 ntTSL 2 BASIC20.22■□□□□ 0.83
CNTNAP1P78357 TRPC1-203ENST00000476941 3061 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
CNTNAP1P78357 IL15-201ENST00000296545 2472 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
CNTNAP1P78357 NRXN1-220ENST00000611589 1857 ntTSL 5 BASIC20.22■□□□□ 0.83
CNTNAP1P78357 SSBP3-203ENST00000371319 1578 ntAPPRIS ALT1 TSL 2 BASIC20.22■□□□□ 0.83
CNTNAP1P78357 C11orf71-201ENST00000325636 652 ntAPPRIS P3 TSL 1 (best) BASIC20.21■□□□□ 0.83
CNTNAP1P78357 CCDC107-201ENST00000327351 804 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
CNTNAP1P78357 AMACR-202ENST00000382068 862 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
CNTNAP1P78357 MXI1-205ENST00000393134 889 ntTSL 2 BASIC20.21■□□□□ 0.83
CNTNAP1P78357 NDUFAF3-203ENST00000395458 808 ntTSL 2 BASIC20.21■□□□□ 0.83
CNTNAP1P78357 AC009902.2-201ENST00000518880 620 ntTSL 4 BASIC20.21■□□□□ 0.83
CNTNAP1P78357 AC027369.6-201ENST00000525520 931 ntBASIC20.21■□□□□ 0.83
CNTNAP1P78357 PPHLN1-221ENST00000552761 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
CNTNAP1P78357 LONP1-215ENST00000593119 2918 ntTSL 2 BASIC20.21■□□□□ 0.83
CNTNAP1P78357 KCNMB4-201ENST00000258111 4731 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
CNTNAP1P78357 DPAGT1-203ENST00000409993 3274 ntAPPRIS P1 TSL 2 BASIC20.21■□□□□ 0.83
CNTNAP1P78357 AC008764.1-201ENST00000409035 2567 ntAPPRIS P1 TSL 2 BASIC20.21■□□□□ 0.83
CNTNAP1P78357 GRAP2-202ENST00000407075 1304 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
CNTNAP1P78357 MAST2-201ENST00000361297 5738 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
CNTNAP1P78357 CBX1-202ENST00000393408 2422 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
CNTNAP1P78357 HPSE-207ENST00000513463 1458 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
CNTNAP1P78357 RNH1-205ENST00000397615 2014 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
CNTNAP1P78357 CBS-203ENST00000398158 2453 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
CNTNAP1P78357 CBSL-206ENST00000624406 2453 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
CNTNAP1P78357 SPRED2-206ENST00000443619 1800 ntAPPRIS P1 TSL 2 BASIC20.21■□□□□ 0.83
CNTNAP1P78357 POLDIP3-202ENST00000339677 783 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
CNTNAP1P78357 CLCN6-207ENST00000376497 814 ntTSL 3 BASIC20.21■□□□□ 0.83
CNTNAP1P78357 NME6-203ENST00000415644 849 ntTSL 2 BASIC20.21■□□□□ 0.83
CNTNAP1P78357 AC073130.2-202ENST00000444244 842 ntTSL 3 BASIC20.21■□□□□ 0.83
CNTNAP1P78357 AC022210.1-201ENST00000449856 793 ntBASIC20.21■□□□□ 0.83
CNTNAP1P78357 REEP4-207ENST00000523293 913 ntTSL 3 BASIC20.21■□□□□ 0.83
CNTNAP1P78357 ALG1L8P-201ENST00000533887 760 ntBASIC20.21■□□□□ 0.83
CNTNAP1P78357 PMF1-BGLAP-204ENST00000567140 655 ntTSL 3 BASIC20.21■□□□□ 0.83
CNTNAP1P78357 KRT16P2-202ENST00000579062 563 ntTSL 4 BASIC20.21■□□□□ 0.83
CNTNAP1P78357 AC012317.2-201ENST00000623305 2251 ntBASIC20.21■□□□□ 0.83
CNTNAP1P78357 NPTX2-201ENST00000265634 2700 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.83
CNTNAP1P78357 MECP2-205ENST00000453960 1729 ntTSL 1 (best) BASIC20.2■□□□□ 0.83
CNTNAP1P78357 FKBP10-201ENST00000321562 2662 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
CNTNAP1P78357 SEMA3B-209ENST00000456560 2221 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
CNTNAP1P78357 NAPA-AS1-201ENST00000593284 1753 ntTSL 2 BASIC20.2■□□□□ 0.82
CNTNAP1P78357 CPEB2-207ENST00000507071 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
CNTNAP1P78357 PML-221ENST00000569965 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
CNTNAP1P78357 ALDH3A1-206ENST00000457500 1925 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
CNTNAP1P78357 WDR4-201ENST00000330317 1471 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
CNTNAP1P78357 LGMN-211ENST00000555699 1728 ntTSL 5 BASIC20.2■□□□□ 0.82
CNTNAP1P78357 MARK2-208ENST00000508192 2924 ntAPPRIS P3 TSL 5 BASIC20.2■□□□□ 0.82
CNTNAP1P78357 ZNF138-201ENST00000307355 1141 ntAPPRIS ALT2 TSL 4 BASIC20.2■□□□□ 0.82
CNTNAP1P78357 AL512384.1-201ENST00000406683 331 ntBASIC20.2■□□□□ 0.82
CNTNAP1P78357 ZNF815P-202ENST00000422825 805 ntTSL 5 BASIC20.2■□□□□ 0.82
CNTNAP1P78357 ROPN1-207ENST00000484329 566 ntTSL 3 BASIC20.2■□□□□ 0.82
CNTNAP1P78357 API5-211ENST00000534695 560 ntTSL 5 BASIC20.2■□□□□ 0.82
CNTNAP1P78357 KRT17P8-201ENST00000540749 863 ntBASIC20.2■□□□□ 0.82
CNTNAP1P78357 POLE2-203ENST00000553805 496 ntTSL 2 BASIC20.2■□□□□ 0.82
CNTNAP1P78357 AC005412.3-201ENST00000580309 715 ntBASIC20.2■□□□□ 0.82
CNTNAP1P78357 PIH1D1-209ENST00000596049 992 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
CNTNAP1P78357 AL009183.1-201ENST00000603760 355 ntBASIC20.2■□□□□ 0.82
CNTNAP1P78357 TPT1-AS1-215ENST00000522673 1519 ntTSL 5 BASIC20.2■□□□□ 0.82
CNTNAP1P78357 TCERG1L-201ENST00000368642 2618 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
CNTNAP1P78357 PRELID3A-209ENST00000592149 2001 ntTSL 2 BASIC20.2■□□□□ 0.82
CNTNAP1P78357 SCYL1-203ENST00000420247 2583 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
CNTNAP1P78357 SARDH-202ENST00000371867 1326 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
CNTNAP1P78357 RNF38-202ENST00000350199 5104 ntAPPRIS P1 TSL 5 BASIC20.19■□□□□ 0.82
CNTNAP1P78357 UMOD-201ENST00000302509 2477 ntAPPRIS P3 TSL 5 BASIC20.19■□□□□ 0.82
CNTNAP1P78357 PRRT2-205ENST00000567659 1470 ntTSL 2 BASIC20.19■□□□□ 0.82
CNTNAP1P78357 SLC44A3-201ENST00000271227 2388 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CNTNAP1P78357 GINM1-201ENST00000367419 2024 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CNTNAP1P78357 TCF25-225ENST00000614813 2047 ntTSL 5 BASIC20.19■□□□□ 0.82
CNTNAP1P78357 SLX1B-SULT1A4-201ENST00000344620 2424 ntTSL 2 BASIC20.19■□□□□ 0.82
CNTNAP1P78357 GTF3C5-202ENST00000372097 2406 ntAPPRIS P3 TSL 1 (best) BASIC20.19■□□□□ 0.82
CNTNAP1P78357 FDXR-217ENST00000582944 1766 ntTSL 2 BASIC20.19■□□□□ 0.82
CNTNAP1P78357 ABCG4-206ENST00000622721 2553 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CNTNAP1P78357 LMNA-208ENST00000448611 1943 ntTSL 2 BASIC20.19■□□□□ 0.82
CNTNAP1P78357 TCEAL3-203ENST00000372628 1221 ntAPPRIS P1 TSL 5 BASIC20.19■□□□□ 0.82
CNTNAP1P78357 VCX-202ENST00000381059 967 ntAPPRIS P2 TSL 1 (best) BASIC20.19■□□□□ 0.82
CNTNAP1P78357 YBEY-203ENST00000397691 764 ntAPPRIS P1 TSL 3 BASIC20.19■□□□□ 0.82
CNTNAP1P78357 DANCR-201ENST00000411630 904 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
CNTNAP1P78357 AC008443.3-201ENST00000412295 549 ntTSL 4 BASIC20.19■□□□□ 0.82
CNTNAP1P78357 TMEM247-204ENST00000434431 680 ntAPPRIS P1 TSL 5 BASIC20.19■□□□□ 0.82
CNTNAP1P78357 ATXN2-AS-201ENST00000547021 485 ntTSL 2 BASIC20.19■□□□□ 0.82
CNTNAP1P78357 OTUB2-202ENST00000553723 708 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
CNTNAP1P78357 AL162231.3-201ENST00000556278 902 ntAPPRIS P1 TSL 5 BASIC20.19■□□□□ 0.82
CNTNAP1P78357 RAB43P1-201ENST00000561790 589 ntBASIC20.19■□□□□ 0.82
CNTNAP1P78357 AL161645.1-201ENST00000622716 1255 ntBASIC20.19■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 49.9 ms