Protein–RNA interactions for Protein: P56696

KCNQ4, Potassium voltage-gated channel subfamily KQT member 4, humanhuman

Predictions only

Length 695 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNQ4P56696 AC239798.4-201ENST00000609879 700 ntTSL 2 BASIC21.64■■□□□ 1.05
KCNQ4P56696 AC004840.1-201ENST00000636359 365 ntBASIC21.64■■□□□ 1.05
KCNQ4P56696 CDHR5-201ENST00000349570 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC21.64■■□□□ 1.05
KCNQ4P56696 PIF1-205ENST00000559239 2677 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
KCNQ4P56696 SYTL3-201ENST00000297239 2292 ntAPPRIS ALT1 TSL 1 (best) BASIC21.64■■□□□ 1.05
KCNQ4P56696 NPAS3-202ENST00000356141 2802 ntAPPRIS ALT2 TSL 1 (best) BASIC21.64■■□□□ 1.05
KCNQ4P56696 PCSK5-202ENST00000376767 2845 ntTSL 2 BASIC21.64■■□□□ 1.05
KCNQ4P56696 SNAP47-202ENST00000366759 2362 ntAPPRIS P3 TSL 1 (best) BASIC21.63■■□□□ 1.05
KCNQ4P56696 CREB3L3-204ENST00000602147 1382 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
KCNQ4P56696 MGEA5-205ENST00000439817 5043 ntTSL 5 BASIC21.63■■□□□ 1.05
KCNQ4P56696 ADGRL1-202ENST00000361434 5610 ntAPPRIS P3 TSL 1 (best) BASIC21.63■■□□□ 1.05
KCNQ4P56696 TCTN1-229ENST00000614115 1965 ntTSL 5 BASIC21.63■■□□□ 1.05
KCNQ4P56696 STK25-203ENST00000403346 2210 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
KCNQ4P56696 ISOC1-201ENST00000173527 1940 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
KCNQ4P56696 ATP6AP2-224ENST00000637327 1929 ntAPPRIS ALT2 TSL 2 BASIC21.63■■□□□ 1.05
KCNQ4P56696 TRPC1-203ENST00000476941 3061 ntAPPRIS ALT2 TSL 1 (best) BASIC21.63■■□□□ 1.05
KCNQ4P56696 DCLK2-207ENST00000635524 2153 ntAPPRIS ALT2 TSL 5 BASIC21.63■■□□□ 1.05
KCNQ4P56696 LSP1-217ENST00000612798 1881 ntAPPRIS ALT2 TSL 2 BASIC21.63■■□□□ 1.05
KCNQ4P56696 SS18L2-201ENST00000011691 781 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
KCNQ4P56696 MXI1-205ENST00000393134 889 ntTSL 2 BASIC21.63■■□□□ 1.05
KCNQ4P56696 TNFRSF14-202ENST00000409119 896 ntAPPRIS ALT2 TSL 3 BASIC21.63■■□□□ 1.05
KCNQ4P56696 AC093151.3-201ENST00000425554 623 ntTSL 2 BASIC21.63■■□□□ 1.05
KCNQ4P56696 MSLNL-201ENST00000442466 2109 ntAPPRIS P1 TSL 5 BASIC21.63■■□□□ 1.05
KCNQ4P56696 GIMAP3P-201ENST00000495150 836 ntBASIC21.63■■□□□ 1.05
KCNQ4P56696 ZFPL1-207ENST00000526791 384 ntTSL 3 BASIC21.63■■□□□ 1.05
KCNQ4P56696 EMC4-203ENST00000557879 1009 ntTSL 3 BASIC21.63■■□□□ 1.05
KCNQ4P56696 AC040162.1-202ENST00000573493 573 ntAPPRIS P1 TSL 3 BASIC21.63■■□□□ 1.05
KCNQ4P56696 AC007216.4-201ENST00000574364 562 ntTSL 4 BASIC21.63■■□□□ 1.05
KCNQ4P56696 SLC25A39-207ENST00000586016 1156 ntTSL 5 BASIC21.63■■□□□ 1.05
KCNQ4P56696 ATP6V1D-201ENST00000216442 1845 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
KCNQ4P56696 SPRED2-206ENST00000443619 1800 ntAPPRIS P1 TSL 2 BASIC21.63■■□□□ 1.05
KCNQ4P56696 NEUROD2-201ENST00000302584 2041 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
KCNQ4P56696 COQ10B-201ENST00000263960 2239 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
KCNQ4P56696 PCCA-202ENST00000376285 2494 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
KCNQ4P56696 HEPN1-201ENST00000408930 1434 ntAPPRIS P1 BASIC21.63■■□□□ 1.05
KCNQ4P56696 AC009779.2-201ENST00000552576 1443 ntTSL 4 BASIC21.63■■□□□ 1.05
KCNQ4P56696 MICU3-201ENST00000318063 3992 ntAPPRIS P2 TSL 1 (best) BASIC21.63■■□□□ 1.05
KCNQ4P56696 LINC00029-201ENST00000370341 1631 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
KCNQ4P56696 ACP5-203ENST00000433365 1397 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
KCNQ4P56696 MAFF-207ENST00000538999 2365 ntTSL 2 BASIC21.62■■□□□ 1.05
KCNQ4P56696 AC104581.1-202ENST00000635932 2618 ntBASIC21.62■■□□□ 1.05
KCNQ4P56696 CAPN5-205ENST00000529629 2333 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
KCNQ4P56696 CHCHD3-201ENST00000262570 1598 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
KCNQ4P56696 OCIAD1-202ENST00000381473 1594 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
KCNQ4P56696 RNH1-205ENST00000397615 2014 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
KCNQ4P56696 MATN4-203ENST00000372754 2200 ntAPPRIS ALT2 TSL 5 BASIC21.62■■□□□ 1.05
KCNQ4P56696 RETN-202ENST00000381324 249 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
KCNQ4P56696 MIR1909-201ENST00000411312 80 ntBASIC21.62■■□□□ 1.05
KCNQ4P56696 LINC00398-201ENST00000414407 906 ntTSL 2 BASIC21.62■■□□□ 1.05
KCNQ4P56696 RCAN3-204ENST00000425530 997 ntTSL 5 BASIC21.62■■□□□ 1.05
KCNQ4P56696 AC245100.3-201ENST00000441281 285 ntBASIC21.62■■□□□ 1.05
KCNQ4P56696 AC124944.1-201ENST00000448113 625 ntTSL 2 BASIC21.62■■□□□ 1.05
KCNQ4P56696 AC068228.2-201ENST00000522383 777 ntTSL 3 BASIC21.62■■□□□ 1.05
KCNQ4P56696 NR2C2AP-204ENST00000538165 891 ntTSL 2 BASIC21.62■■□□□ 1.05
KCNQ4P56696 TRMT112-206ENST00000544844 1106 ntAPPRIS P3 TSL 1 (best) BASIC21.62■■□□□ 1.05
KCNQ4P56696 HIC1-207ENST00000619757 6711 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
KCNQ4P56696 EGFL7-203ENST00000371699 2125 ntAPPRIS P1 TSL 2 BASIC21.62■■□□□ 1.05
KCNQ4P56696 RUVBL1-202ENST00000464873 2126 ntTSL 2 BASIC21.62■■□□□ 1.05
KCNQ4P56696 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
KCNQ4P56696 AL162586.1-201ENST00000439298 2055 ntTSL 2 BASIC21.62■■□□□ 1.05
KCNQ4P56696 CASP9-210ENST00000546424 4463 ntAPPRIS ALT2 TSL 5 BASIC21.62■■□□□ 1.05
KCNQ4P56696 WTAP-205ENST00000614346 1623 ntTSL 2 BASIC21.62■■□□□ 1.05
KCNQ4P56696 HARBI1-201ENST00000326737 1967 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
KCNQ4P56696 ACY3-201ENST00000255082 1300 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
KCNQ4P56696 SDHA-213ENST00000510361 2148 ntTSL 2 BASIC21.61■■□□□ 1.05
KCNQ4P56696 RTEL1-204ENST00000370003 2273 ntTSL 2 BASIC21.61■■□□□ 1.05
KCNQ4P56696 ATP6V0B-201ENST00000236067 944 ntTSL 2 BASIC21.61■■□□□ 1.05
KCNQ4P56696 AC073349.1-201ENST00000340779 1062 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
KCNQ4P56696 C1QA-201ENST00000374642 1143 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
KCNQ4P56696 RTN4RL2-202ENST00000395120 582 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
KCNQ4P56696 AC079776.1-201ENST00000401540 1152 ntBASIC21.61■■□□□ 1.05
KCNQ4P56696 IL32-206ENST00000440815 920 ntAPPRIS P4 TSL 2 BASIC21.61■■□□□ 1.05
KCNQ4P56696 AC073130.2-202ENST00000444244 842 ntTSL 3 BASIC21.61■■□□□ 1.05
KCNQ4P56696 IL32-207ENST00000444393 892 ntAPPRIS P4 TSL 2 BASIC21.61■■□□□ 1.05
KCNQ4P56696 ATP6V0B-211ENST00000498664 825 ntTSL 2 BASIC21.61■■□□□ 1.05
KCNQ4P56696 LY6E-204ENST00000519546 971 ntTSL 2 BASIC21.61■■□□□ 1.05
KCNQ4P56696 IL32-219ENST00000531965 746 ntAPPRIS ALT2 TSL 1 (best) BASIC21.61■■□□□ 1.05
KCNQ4P56696 IL32-226ENST00000548476 1014 ntAPPRIS ALT2 TSL 2 BASIC21.61■■□□□ 1.05
KCNQ4P56696 AL606495.2-201ENST00000605867 535 ntBASIC21.61■■□□□ 1.05
KCNQ4P56696 GPER1-207ENST00000619052 571 ntTSL 2 BASIC21.61■■□□□ 1.05
KCNQ4P56696 NFS1-202ENST00000374085 2645 ntTSL 2 BASIC21.61■■□□□ 1.05
KCNQ4P56696 T-201ENST00000296946 2436 ntAPPRIS P1 TSL 5 BASIC21.61■■□□□ 1.05
KCNQ4P56696 TCP11-201ENST00000244645 2018 ntAPPRIS P3 TSL 1 (best) BASIC21.61■■□□□ 1.05
KCNQ4P56696 RAB39A-201ENST00000320578 1830 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
KCNQ4P56696 ARFRP1-212ENST00000618838 1623 ntAPPRIS P1 TSL 5 BASIC21.61■■□□□ 1.05
KCNQ4P56696 NEIL1-221ENST00000569035 1797 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
KCNQ4P56696 GGT3P-201ENST00000412448 2340 ntTSL 2 BASIC21.61■■□□□ 1.05
KCNQ4P56696 ZNF140-210ENST00000544426 2340 ntTSL 2 BASIC21.61■■□□□ 1.05
KCNQ4P56696 STPG3-AS1-201ENST00000612170 1701 ntTSL 2 BASIC21.6■■□□□ 1.05
KCNQ4P56696 ATP11C-203ENST00000370557 6924 ntAPPRIS ALT2 TSL 5 BASIC21.6■■□□□ 1.05
KCNQ4P56696 NGFR-202ENST00000504201 1840 ntTSL 2 BASIC21.6■■□□□ 1.05
KCNQ4P56696 SRGAP2C-201ENST00000304465 1477 ntTSL 5 BASIC21.6■■□□□ 1.05
KCNQ4P56696 SRGAP2-201ENST00000419187 1477 ntTSL 5 BASIC21.6■■□□□ 1.05
KCNQ4P56696 SPSB2-203ENST00000519357 1496 ntTSL 2 BASIC21.6■■□□□ 1.05
KCNQ4P56696 SRGAP2B-205ENST00000619678 1477 ntTSL 5 BASIC21.6■■□□□ 1.05
KCNQ4P56696 SARS2-212ENST00000600042 1630 ntTSL 2 BASIC21.6■■□□□ 1.05
KCNQ4P56696 NRN1L-201ENST00000339176 710 ntAPPRIS P2 TSL 1 (best) BASIC21.6■■□□□ 1.05
KCNQ4P56696 CCDC151-201ENST00000356392 2107 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
KCNQ4P56696 AC093702.1-201ENST00000423433 367 ntTSL 3 BASIC21.6■■□□□ 1.05
KCNQ4P56696 TMEM247-204ENST00000434431 680 ntAPPRIS P1 TSL 5 BASIC21.6■■□□□ 1.05
Retrieved 100 of 98,524 protein–RNA pairs in 27.8 ms