Protein–RNA interactions for Protein: P55290

CDH13, Cadherin-13, humanhuman

Predictions only

Length 713 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13P55290 CXorf58-201ENST00000379211 1752 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
CDH13P55290 ADGRG3-202ENST00000450388 1785 ntAPPRIS ALT2 TSL 2 BASIC16.82■□□□□ 0.28
CDH13P55290 LAT2-204ENST00000398475 2453 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
CDH13P55290 SBNO2-204ENST00000587024 4861 ntAPPRIS ALT2 TSL 2 BASIC16.81■□□□□ 0.28
CDH13P55290 UGCG-201ENST00000374279 4007 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CDH13P55290 CHAC1-204ENST00000617768 1560 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
CDH13P55290 LMNB2-201ENST00000325327 4671 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CDH13P55290 SMN1-204ENST00000506163 1445 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
CDH13P55290 MCTP2-205ENST00000543482 1422 ntTSL 2 BASIC16.81■□□□□ 0.28
CDH13P55290 RTEL1-TNFRSF6B-202ENST00000482936 4931 ntAPPRIS P5 TSL 2 BASIC16.81■□□□□ 0.28
CDH13P55290 PCDH8P1-201ENST00000428983 2773 ntBASIC16.81■□□□□ 0.28
CDH13P55290 ABHD14B-204ENST00000461108 1397 ntTSL 2 BASIC16.81■□□□□ 0.28
CDH13P55290 IRF5-210ENST00000477535 1374 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
CDH13P55290 GTDC1-219ENST00000542155 2677 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
CDH13P55290 BCAN-202ENST00000361588 2563 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
CDH13P55290 CD9-202ENST00000382515 1229 ntTSL 5 BASIC16.81■□□□□ 0.28
CDH13P55290 TNFSF13-204ENST00000396542 726 ntTSL 3 BASIC16.81■□□□□ 0.28
CDH13P55290 UBE2J2-204ENST00000400929 1057 ntTSL 3 BASIC16.81■□□□□ 0.28
CDH13P55290 TSSC2-201ENST00000450217 709 ntBASIC16.81■□□□□ 0.28
CDH13P55290 BRICD5-203ENST00000566018 555 ntTSL 2 BASIC16.81■□□□□ 0.28
CDH13P55290 AC116407.4-201ENST00000623319 1061 ntBASIC16.81■□□□□ 0.28
CDH13P55290 AC073592.5-201ENST00000624854 528 ntBASIC16.81■□□□□ 0.28
CDH13P55290 CHKA-201ENST00000265689 2530 ntAPPRIS P4 TSL 1 (best) BASIC16.81■□□□□ 0.28
CDH13P55290 POC1A-201ENST00000296484 1898 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
CDH13P55290 NTRK2-207ENST00000376214 5608 ntAPPRIS P3 TSL 5 BASIC16.81■□□□□ 0.28
CDH13P55290 SLC10A3-204ENST00000393587 1862 ntAPPRIS P3 TSL 2 BASIC16.81■□□□□ 0.28
CDH13P55290 PCCB-209ENST00000469217 1841 ntAPPRIS ALT2 TSL 2 BASIC16.81■□□□□ 0.28
CDH13P55290 DARS-201ENST00000264161 2361 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CDH13P55290 FBXO21-201ENST00000330622 2906 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
CDH13P55290 EVA1A-205ENST00000410113 1747 ntAPPRIS P2 TSL 3 BASIC16.81■□□□□ 0.28
CDH13P55290 PIGQ-201ENST00000026218 2846 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
CDH13P55290 CEACAM21-203ENST00000407170 1691 ntTSL 2 BASIC16.81■□□□□ 0.28
CDH13P55290 SGCE-206ENST00000445866 1666 ntTSL 5 BASIC16.81■□□□□ 0.28
CDH13P55290 DMRTC2-204ENST00000596827 1675 ntTSL 2 BASIC16.81■□□□□ 0.28
CDH13P55290 LRRC14-205ENST00000529022 2243 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CDH13P55290 ALKBH5-203ENST00000541285 1605 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
CDH13P55290 MAPK8IP1-202ENST00000395629 3180 ntTSL 5 BASIC16.81■□□□□ 0.28
CDH13P55290 C2CD4C-201ENST00000332235 3129 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
CDH13P55290 MAP3K20-203ENST00000409176 2572 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CDH13P55290 ZNF281-203ENST00000367353 3080 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
CDH13P55290 AC074117.1-201ENST00000447070 3060 ntTSL 2 BASIC16.81■□□□□ 0.28
CDH13P55290 APOA4-201ENST00000357780 1473 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CDH13P55290 C12orf29-201ENST00000356891 2919 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CDH13P55290 PFDN6-206ENST00000463584 1915 ntTSL 3 BASIC16.8■□□□□ 0.28
CDH13P55290 TTC8-216ENST00000614125 2377 ntTSL 5 BASIC16.8■□□□□ 0.28
CDH13P55290 PLXDC2-202ENST00000377242 2822 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
CDH13P55290 AGPAT2-205ENST00000538402 1357 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CDH13P55290 ALDH3A1-205ENST00000444455 1771 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
CDH13P55290 TTC29-205ENST00000504425 1777 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
CDH13P55290 SHBG-201ENST00000340624 1311 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
CDH13P55290 KANK1-204ENST00000382293 5249 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
CDH13P55290 STAT5A-201ENST00000345506 4301 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CDH13P55290 NPRL2-201ENST00000232501 1700 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CDH13P55290 TP73-208ENST00000378295 5188 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CDH13P55290 WNK1-206ENST00000535572 9886 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
CDH13P55290 AC003669.1-201ENST00000334569 611 ntBASIC16.8■□□□□ 0.28
CDH13P55290 PPIH-202ENST00000372549 327 ntTSL 3 BASIC16.8■□□□□ 0.28
CDH13P55290 PSMB8-202ENST00000374882 1124 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CDH13P55290 RPS14-203ENST00000407193 784 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
CDH13P55290 KLF4P1-201ENST00000412782 1185 ntBASIC16.8■□□□□ 0.28
CDH13P55290 AP002383.4-201ENST00000442518 975 ntBASIC16.8■□□□□ 0.28
CDH13P55290 AC013356.2-201ENST00000559730 729 ntTSL 3 BASIC16.8■□□□□ 0.28
CDH13P55290 NME3-204ENST00000563498 920 ntTSL 2 BASIC16.8■□□□□ 0.28
CDH13P55290 GRAMD1A-202ENST00000411896 2523 ntAPPRIS ALT2 TSL 2 BASIC16.8■□□□□ 0.28
CDH13P55290 SERINC2-205ENST00000536384 2062 ntTSL 2 BASIC16.8■□□□□ 0.28
CDH13P55290 AFTPH-202ENST00000238856 4040 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
CDH13P55290 DNAJA3-201ENST00000262375 2763 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
CDH13P55290 CYMP-AS1-201ENST00000457402 2351 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
CDH13P55290 PAPOLB-201ENST00000404991 4262 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
CDH13P55290 TRIM45-203ENST00000369464 3495 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
CDH13P55290 AMOTL2-211ENST00000513145 2653 ntAPPRIS ALT1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CDH13P55290 AC126755.2-202ENST00000427999 1547 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CDH13P55290 PGRMC2-207ENST00000520121 3785 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
CDH13P55290 ESR2-205ENST00000358599 1899 ntTSL 2 BASIC16.8■□□□□ 0.28
CDH13P55290 RASSF8-AS1-202ENST00000500276 2610 ntTSL 2 BASIC16.8■□□□□ 0.28
CDH13P55290 SPOP-201ENST00000347630 2965 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
CDH13P55290 KLC1-206ENST00000389744 3250 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
CDH13P55290 ATP2B1-AS1-201ENST00000605386 3632 ntBASIC16.79■□□□□ 0.28
CDH13P55290 EFNB3-201ENST00000226091 3222 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CDH13P55290 DGKZ-201ENST00000318201 3213 ntTSL 2 BASIC16.79■□□□□ 0.28
CDH13P55290 TMEM145-201ENST00000301204 1768 ntAPPRIS P2 TSL 2 BASIC16.79■□□□□ 0.28
CDH13P55290 KPNA2-202ENST00000537025 2456 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CDH13P55290 THSD1-202ENST00000349258 3189 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
CDH13P55290 PIAS3-201ENST00000369298 2761 ntTSL 5 BASIC16.79■□□□□ 0.28
CDH13P55290 TCAF2-203ENST00000425618 2448 ntTSL 2 BASIC16.79■□□□□ 0.28
CDH13P55290 WT1-209ENST00000530998 2421 ntTSL 2 BASIC16.79■□□□□ 0.28
CDH13P55290 WASF1-202ENST00000359451 3075 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CDH13P55290 LY6K-205ENST00000522591 2724 ntAPPRIS ALT2 TSL 2 BASIC16.79■□□□□ 0.28
CDH13P55290 LINC00960-201ENST00000463183 1333 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
CDH13P55290 FAM222B-211ENST00000582266 2613 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
CDH13P55290 ZNF84-201ENST00000327668 7162 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
CDH13P55290 TBP-202ENST00000392092 1903 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
CDH13P55290 SLC35F3-202ENST00000366618 2891 ntAPPRIS P3 TSL 2 BASIC16.79■□□□□ 0.28
CDH13P55290 HSD17B10-201ENST00000168216 960 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CDH13P55290 GPR32-201ENST00000270590 1269 ntAPPRIS P1 BASIC16.79■□□□□ 0.28
CDH13P55290 NXPH2-201ENST00000272641 1052 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CDH13P55290 BEX4-201ENST00000372691 1066 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
CDH13P55290 MPIG6B-202ENST00000375805 668 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
CDH13P55290 ZNF655-215ENST00000440391 1198 ntTSL 2 BASIC16.79■□□□□ 0.28
CDH13P55290 AC022424.1-201ENST00000512155 889 ntTSL 3 BASIC16.79■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 60.7 ms