Protein–RNA interactions for Protein: P48764

SLC9A3, Sodium/hydrogen exchanger 3, humanhuman

Predictions only

Length 834 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC9A3P48764 PLXNB3-201ENST00000361971 6146 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
SLC9A3P48764 ROBO3-221ENST00000543966 1520 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
SLC9A3P48764 DAB2IP-205ENST00000408936 6784 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
SLC9A3P48764 CXXC1-212ENST00000589940 2242 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
SLC9A3P48764 AC105411.1-202ENST00000565050 1476 ntTSL 5 BASIC15.79■□□□□ 0.12
SLC9A3P48764 TLX2-204ENST00000621092 1452 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
SLC9A3P48764 PPA2-202ENST00000348706 1414 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
SLC9A3P48764 NADK2-206ENST00000506945 1437 ntTSL 2 BASIC15.79■□□□□ 0.12
SLC9A3P48764 TTLL10-201ENST00000379288 2114 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
SLC9A3P48764 ANAPC11-211ENST00000575195 1361 ntAPPRIS P1 TSL 2 BASIC15.79■□□□□ 0.12
SLC9A3P48764 CAB39-203ENST00000410084 1324 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
SLC9A3P48764 CCDC74A-206ENST00000467992 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
SLC9A3P48764 GSS-201ENST00000216951 1922 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
SLC9A3P48764 KLK12-201ENST00000250351 882 ntAPPRIS P4 TSL 5 BASIC15.79■□□□□ 0.12
SLC9A3P48764 HAAO-201ENST00000294973 1265 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
SLC9A3P48764 KLK12-202ENST00000319590 1074 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
SLC9A3P48764 RPL8-202ENST00000394920 965 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
SLC9A3P48764 BECN2-201ENST00000419583 1296 ntAPPRIS P1 BASIC15.79■□□□□ 0.12
SLC9A3P48764 DLEU2-203ENST00000425586 1267 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
SLC9A3P48764 ZNF436-AS1-203ENST00000454117 997 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
SLC9A3P48764 PACRGL-218ENST00000507634 1142 ntTSL 5 BASIC15.79■□□□□ 0.12
SLC9A3P48764 MOK-234ENST00000524370 1165 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
SLC9A3P48764 KLK12-205ENST00000529888 735 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
SLC9A3P48764 RDH5-202ENST00000547072 1054 ntTSL 5 BASIC15.79■□□□□ 0.12
SLC9A3P48764 AC140504.1-202ENST00000568222 652 ntTSL 5 BASIC15.79■□□□□ 0.12
SLC9A3P48764 AC010531.1-201ENST00000568879 953 ntAPPRIS P1 TSL 4 BASIC15.79■□□□□ 0.12
SLC9A3P48764 AC109462.3-201ENST00000573934 613 ntBASIC15.79■□□□□ 0.12
SLC9A3P48764 LINC00092-202ENST00000580908 580 ntTSL 2 BASIC15.79■□□□□ 0.12
SLC9A3P48764 AL138831.2-201ENST00000606564 490 ntBASIC15.79■□□□□ 0.12
SLC9A3P48764 SURF4-208ENST00000613129 3148 ntTSL 2 BASIC15.79■□□□□ 0.12
SLC9A3P48764 RRM2B-201ENST00000251810 4931 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
SLC9A3P48764 FGD4-212ENST00000534526 2977 ntTSL 5 BASIC15.79■□□□□ 0.12
SLC9A3P48764 ANKFY1-202ENST00000570535 6458 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
SLC9A3P48764 TMEM229B-201ENST00000357461 4068 ntAPPRIS P1 TSL 2 BASIC15.79■□□□□ 0.12
SLC9A3P48764 LINC02012-201ENST00000608206 1725 ntBASIC15.79■□□□□ 0.12
SLC9A3P48764 PSMD2-201ENST00000310118 3449 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
SLC9A3P48764 PFN2-201ENST00000239940 2261 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
SLC9A3P48764 CALHM3-201ENST00000369783 1652 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
SLC9A3P48764 NEIL2-203ENST00000436750 2226 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
SLC9A3P48764 AL353608.3-201ENST00000603200 2211 ntTSL 5 BASIC15.79■□□□□ 0.12
SLC9A3P48764 GPAT2-201ENST00000359548 2761 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
SLC9A3P48764 PBK-201ENST00000301905 2118 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
SLC9A3P48764 SRSF1-201ENST00000258962 1513 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
SLC9A3P48764 NBPF11-205ENST00000615281 5494 ntAPPRIS P2 TSL 1 (best) BASIC15.78■□□□□ 0.12
SLC9A3P48764 GLOD4-203ENST00000536578 2497 ntTSL 5 BASIC15.78■□□□□ 0.12
SLC9A3P48764 JMJD7-201ENST00000397299 1416 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
SLC9A3P48764 WDR81-204ENST00000419248 3315 ntTSL 2 BASIC15.78■□□□□ 0.12
SLC9A3P48764 PTPRN2-205ENST00000409483 4711 ntAPPRIS ALT2 TSL 2 BASIC15.78■□□□□ 0.12
SLC9A3P48764 NAA30-204ENST00000556492 7644 ntAPPRIS P2 TSL 1 (best) BASIC15.78■□□□□ 0.12
SLC9A3P48764 FOXRED2-203ENST00000397223 2184 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
SLC9A3P48764 SUSD4-202ENST00000343846 3480 ntAPPRIS P1 TSL 2 BASIC15.78■□□□□ 0.12
SLC9A3P48764 PICALM-219ENST00000532317 3474 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
SLC9A3P48764 MBNL1-201ENST00000282486 6422 ntAPPRIS P4 TSL 5 BASIC15.78■□□□□ 0.12
SLC9A3P48764 RHEBL1-201ENST00000301068 1210 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
SLC9A3P48764 ENSA-206ENST00000361631 725 ntTSL 2 BASIC15.78■□□□□ 0.12
SLC9A3P48764 FAM220CP-201ENST00000395253 831 ntBASIC15.78■□□□□ 0.12
SLC9A3P48764 NDUFA13-201ENST00000428459 576 ntTSL 2 BASIC15.78■□□□□ 0.12
SLC9A3P48764 BOC-211ENST00000484034 1286 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
SLC9A3P48764 LCN10-205ENST00000497771 723 ntAPPRIS P2 TSL 1 (best) BASIC15.78■□□□□ 0.12
SLC9A3P48764 CD320-202ENST00000537716 1119 ntTSL 2 BASIC15.78■□□□□ 0.12
SLC9A3P48764 AC011840.4-201ENST00000578471 627 ntBASIC15.78■□□□□ 0.12
SLC9A3P48764 AC087645.2-201ENST00000586321 799 ntTSL 3 BASIC15.78■□□□□ 0.12
SLC9A3P48764 AC104971.2-201ENST00000588144 1209 ntTSL 2 BASIC15.78■□□□□ 0.12
SLC9A3P48764 ZNF772-206ENST00000600175 737 ntTSL 2 BASIC15.78■□□□□ 0.12
SLC9A3P48764 AC004130.1-202ENST00000603156 666 ntTSL 2 BASIC15.78■□□□□ 0.12
SLC9A3P48764 DHRS2-210ENST00000611765 1287 ntAPPRIS ALT2 TSL 2 BASIC15.78■□□□□ 0.12
SLC9A3P48764 BDKRB1-204ENST00000611804 1085 ntAPPRIS P1 BASIC15.78■□□□□ 0.12
SLC9A3P48764 AC124864.1-201ENST00000623408 392 ntBASIC15.78■□□□□ 0.12
SLC9A3P48764 RRBP1-208ENST00000470422 2070 ntTSL 2 BASIC15.78■□□□□ 0.12
SLC9A3P48764 MEX3C-204ENST00000616921 3269 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
SLC9A3P48764 MRPL4-203ENST00000393733 1620 ntTSL 5 BASIC15.78■□□□□ 0.12
SLC9A3P48764 SH3BP5-202ENST00000383791 2822 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
SLC9A3P48764 CAMK1D-201ENST00000378845 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
SLC9A3P48764 EEFSEC-202ENST00000483457 1859 ntTSL 5 BASIC15.78■□□□□ 0.12
SLC9A3P48764 CRTC3-202ENST00000420329 5209 ntAPPRIS ALT1 TSL 2 BASIC15.78■□□□□ 0.12
SLC9A3P48764 FZR1-202ENST00000395095 1491 ntAPPRIS ALT1 TSL 1 (best) BASIC15.78■□□□□ 0.12
SLC9A3P48764 ANKRD17-201ENST00000330838 7734 ntAPPRIS ALT2 TSL 2 BASIC15.78■□□□□ 0.12
SLC9A3P48764 NKAIN1-201ENST00000373736 2589 ntAPPRIS P1 TSL 2 BASIC15.78■□□□□ 0.12
SLC9A3P48764 RUNX1-201ENST00000300305 6222 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
SLC9A3P48764 GIPR-201ENST00000263281 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.12
SLC9A3P48764 MYBPH-202ENST00000621380 1772 ntTSL 5 BASIC15.77■□□□□ 0.12
SLC9A3P48764 B4GALT4-216ENST00000483209 2494 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
SLC9A3P48764 SREBF1-201ENST00000261646 4178 ntAPPRIS P3 TSL 1 (best) BASIC15.77■□□□□ 0.12
SLC9A3P48764 SH2B3-202ENST00000538307 2062 ntTSL 2 BASIC15.77■□□□□ 0.12
SLC9A3P48764 AC093525.9-201ENST00000624961 1746 ntBASIC15.77■□□□□ 0.12
SLC9A3P48764 DTNBP1-203ENST00000355917 1359 ntTSL 5 BASIC15.77■□□□□ 0.12
SLC9A3P48764 CXorf38-202ENST00000378421 2380 ntTSL 2 BASIC15.77■□□□□ 0.12
SLC9A3P48764 MSC-201ENST00000325509 2023 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
SLC9A3P48764 CTSB-228ENST00000533455 2009 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
SLC9A3P48764 MRPS5-201ENST00000272418 1652 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
SLC9A3P48764 LIMS2-208ENST00000410011 2335 ntAPPRIS ALT1 TSL 1 (best) BASIC15.77■□□□□ 0.12
SLC9A3P48764 P2RX5-209ENST00000552276 1642 ntAPPRIS ALT2 TSL 5 BASIC15.77■□□□□ 0.12
SLC9A3P48764 TSPAN7-202ENST00000378482 1909 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
SLC9A3P48764 PAX3-201ENST00000258387 958 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
SLC9A3P48764 NUDT8-201ENST00000301490 809 ntAPPRIS P3 TSL 1 (best) BASIC15.77■□□□□ 0.12
SLC9A3P48764 S100A3-201ENST00000368712 579 ntAPPRIS P1 TSL 3 BASIC15.77■□□□□ 0.12
SLC9A3P48764 C6orf48-204ENST00000375639 712 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
SLC9A3P48764 C6orf48-206ENST00000375641 602 ntAPPRIS P1 TSL 2 BASIC15.77■□□□□ 0.12
SLC9A3P48764 RASGRP2-205ENST00000377489 583 ntTSL 3 BASIC15.77■□□□□ 0.12
SLC9A3P48764 RPS9-203ENST00000391752 772 ntAPPRIS P1 TSL 2 BASIC15.77■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 54.1 ms