Protein–RNA interactions for Protein: P48065

SLC6A12, Sodium- and chloride-dependent betaine transporter, humanhuman

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A12P48065 TMEM216-201ENST00000334888 1306 ntAPPRIS ALT2 TSL 2 BASIC16.53■□□□□ 0.24
SLC6A12P48065 PTHLH-203ENST00000395872 1318 ntAPPRIS ALT1 TSL 5 BASIC16.53■□□□□ 0.24
SLC6A12P48065 MGAT1-203ENST00000393340 3077 ntAPPRIS P1 TSL 2 BASIC16.53■□□□□ 0.24
SLC6A12P48065 GHDC-202ENST00000414034 2496 ntTSL 2 BASIC16.53■□□□□ 0.24
SLC6A12P48065 ZNF232-201ENST00000250076 2179 ntAPPRIS P3 TSL 5 BASIC16.53■□□□□ 0.24
SLC6A12P48065 ASPH-211ENST00000518068 2744 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
SLC6A12P48065 LAGE3P1-201ENST00000425356 484 ntBASIC16.53■□□□□ 0.24
SLC6A12P48065 AC134772.1-202ENST00000435578 549 ntTSL 4 BASIC16.53■□□□□ 0.24
SLC6A12P48065 PAWRP1-201ENST00000451083 565 ntBASIC16.53■□□□□ 0.24
SLC6A12P48065 AC106791.1-202ENST00000508281 1148 ntTSL 2 BASIC16.53■□□□□ 0.24
SLC6A12P48065 AC067930.3-201ENST00000524808 701 ntTSL 3 BASIC16.53■□□□□ 0.24
SLC6A12P48065 SMIM20-205ENST00000614775 1190 ntTSL 5 BASIC16.53■□□□□ 0.24
SLC6A12P48065 AC107918.4-202ENST00000641623 219 ntBASIC16.53■□□□□ 0.24
SLC6A12P48065 RNF144A-201ENST00000320892 5743 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
SLC6A12P48065 DOLK-201ENST00000372586 2090 ntAPPRIS P1 BASIC16.53■□□□□ 0.24
SLC6A12P48065 PPP1R3B-202ENST00000519699 2334 ntAPPRIS P1 TSL 2 BASIC16.53■□□□□ 0.24
SLC6A12P48065 MPP1-202ENST00000369534 2042 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
SLC6A12P48065 TEX264-215ENST00000611400 1488 ntAPPRIS P3 TSL 5 BASIC16.53■□□□□ 0.24
SLC6A12P48065 ZBTB16-202ENST00000392996 2287 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
SLC6A12P48065 CHST11-201ENST00000303694 5709 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
SLC6A12P48065 CR392000.2-201ENST00000640235 1994 ntTSL 2 BASIC16.53■□□□□ 0.24
SLC6A12P48065 RALY-203ENST00000375114 6430 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
SLC6A12P48065 ADAM10-205ENST00000461408 1932 ntTSL 2 BASIC16.53■□□□□ 0.24
SLC6A12P48065 AC005833.1-201ENST00000280684 4237 ntAPPRIS P1 BASIC16.53■□□□□ 0.24
SLC6A12P48065 PACS2-202ENST00000430725 2944 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
SLC6A12P48065 DLG4-202ENST00000399506 3185 ntAPPRIS ALT1 TSL 2 BASIC16.52■□□□□ 0.24
SLC6A12P48065 LRCH2-201ENST00000317135 4929 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.24
SLC6A12P48065 ADARB1-201ENST00000348831 6882 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
SLC6A12P48065 SPIDR-227ENST00000541342 3311 ntAPPRIS ALT2 TSL 2 BASIC16.52■□□□□ 0.24
SLC6A12P48065 SYVN1-203ENST00000377190 3052 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
SLC6A12P48065 C16orf71-204ENST00000590191 2564 ntAPPRIS ALT2 TSL 5 BASIC16.52■□□□□ 0.24
SLC6A12P48065 AC005920.1-201ENST00000501718 2054 ntTSL 2 BASIC16.52■□□□□ 0.24
SLC6A12P48065 CCNYL1-201ENST00000295414 3767 ntTSL 5 BASIC16.52■□□□□ 0.24
SLC6A12P48065 UCKL1-202ENST00000358711 1845 ntTSL 2 BASIC16.52■□□□□ 0.24
SLC6A12P48065 BEND4-203ENST00000611697 1348 ntTSL 2 BASIC16.52■□□□□ 0.24
SLC6A12P48065 OSGEP-201ENST00000206542 2002 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
SLC6A12P48065 DPY19L2P4-202ENST00000497063 2018 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
SLC6A12P48065 RAB3IP-207ENST00000483530 1755 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
SLC6A12P48065 CTNNAL1-201ENST00000325551 2490 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.24
SLC6A12P48065 KCNJ10-208ENST00000639408 1546 ntTSL 5 BASIC16.52■□□□□ 0.24
SLC6A12P48065 PRODH-202ENST00000334029 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
SLC6A12P48065 LFNG-207ENST00000614382 1969 ntTSL 5 BASIC16.52■□□□□ 0.24
SLC6A12P48065 PRSS27-201ENST00000302641 1130 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
SLC6A12P48065 AL355310.2-201ENST00000369843 688 ntTSL 3 BASIC16.52■□□□□ 0.24
SLC6A12P48065 OPN1LW-201ENST00000369951 1261 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
SLC6A12P48065 GYG2P1-204ENST00000382966 639 ntTSL 3 BASIC16.52■□□□□ 0.24
SLC6A12P48065 ODF3B-202ENST00000401779 869 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
SLC6A12P48065 ODF3B-203ENST00000403326 643 ntTSL 3 BASIC16.52■□□□□ 0.24
SLC6A12P48065 DHRS12-203ENST00000444610 1162 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
SLC6A12P48065 EMBP1-201ENST00000458200 901 ntBASIC16.52■□□□□ 0.24
SLC6A12P48065 AC080013.1-203ENST00000468242 720 ntTSL 5 BASIC16.52■□□□□ 0.24
SLC6A12P48065 MPIG6B-210ENST00000480039 790 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
SLC6A12P48065 AC080013.1-201ENST00000495318 566 ntTSL 4 BASIC16.52■□□□□ 0.24
SLC6A12P48065 TOLLIP-AS1-201ENST00000530897 939 ntBASIC16.52■□□□□ 0.24
SLC6A12P48065 MRPL49-206ENST00000531705 489 ntTSL 5 BASIC16.52■□□□□ 0.24
SLC6A12P48065 AP000721.2-201ENST00000537170 650 ntTSL 4 BASIC16.52■□□□□ 0.24
SLC6A12P48065 TUBB4A-209ENST00000598006 565 ntTSL 2 BASIC16.52■□□□□ 0.24
SLC6A12P48065 ZSCAN1-203ENST00000601162 813 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
SLC6A12P48065 INPP5J-202ENST00000400294 2393 ntTSL 2 BASIC16.52■□□□□ 0.23
SLC6A12P48065 JHDM1D-AS1-201ENST00000566699 2380 ntBASIC16.52■□□□□ 0.23
SLC6A12P48065 PMS1-206ENST00000418224 3018 ntTSL 5 BASIC16.52■□□□□ 0.23
SLC6A12P48065 RPAP3-203ENST00000432584 2133 ntTSL 2 BASIC16.52■□□□□ 0.23
SLC6A12P48065 MAPKAP1-208ENST00000394063 2977 ntTSL 5 BASIC16.52■□□□□ 0.23
SLC6A12P48065 ACTRT2-201ENST00000378404 1421 ntAPPRIS P1 BASIC16.52■□□□□ 0.23
SLC6A12P48065 H2AFV-201ENST00000222690 3804 ntAPPRIS ALT1 TSL 2 BASIC16.52■□□□□ 0.23
SLC6A12P48065 ABCG5-201ENST00000260645 2740 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
SLC6A12P48065 COL16A1-203ENST00000373672 5736 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.23
SLC6A12P48065 SGK3-206ENST00000520976 2483 ntTSL 2 BASIC16.52■□□□□ 0.23
SLC6A12P48065 KIAA1324L-207ENST00000444627 3527 ntTSL 5 BASIC16.52■□□□□ 0.23
SLC6A12P48065 NR2F1-201ENST00000327111 3732 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
SLC6A12P48065 ASB16-AS1-201ENST00000585457 2213 ntTSL 2 BASIC16.51■□□□□ 0.23
SLC6A12P48065 RAD51D-201ENST00000335858 1353 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
SLC6A12P48065 AL021920.2-201ENST00000624828 1351 ntBASIC16.51■□□□□ 0.23
SLC6A12P48065 AC006504.4-201ENST00000592118 1568 ntBASIC16.51■□□□□ 0.23
SLC6A12P48065 ANXA8-202ENST00000583448 1971 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
SLC6A12P48065 AHRR-203ENST00000505113 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
SLC6A12P48065 SLC35E2B-204ENST00000614300 2156 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
SLC6A12P48065 TOM1-210ENST00000449058 2389 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
SLC6A12P48065 ISCU-205ENST00000535729 1330 ntTSL 2 BASIC16.51■□□□□ 0.23
SLC6A12P48065 EIF4A3-201ENST00000269349 1734 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
SLC6A12P48065 NR4A2-203ENST00000409108 1735 ntTSL 5 BASIC16.51■□□□□ 0.23
SLC6A12P48065 TSNARE1-205ENST00000520166 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
SLC6A12P48065 TEX19-201ENST00000333437 1936 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
SLC6A12P48065 AL645728.1-201ENST00000366221 2101 ntBASIC16.51■□□□□ 0.23
SLC6A12P48065 ZNRF3-201ENST00000402174 2667 ntAPPRIS P3 TSL 2 BASIC16.51■□□□□ 0.23
SLC6A12P48065 RIMS4-201ENST00000372851 5203 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
SLC6A12P48065 PSMC5-202ENST00000375812 1494 ntTSL 2 BASIC16.51■□□□□ 0.23
SLC6A12P48065 NDUFS7-201ENST00000233627 1039 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
SLC6A12P48065 C1orf43-204ENST00000368518 1278 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
SLC6A12P48065 DNASE1L2-202ENST00000382437 1222 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
SLC6A12P48065 FAM3A-205ENST00000393572 1041 ntTSL 2 BASIC16.51■□□□□ 0.23
SLC6A12P48065 ELK2BP-201ENST00000415014 1224 ntBASIC16.51■□□□□ 0.23
SLC6A12P48065 KRT18P27-201ENST00000427733 1299 ntBASIC16.51■□□□□ 0.23
SLC6A12P48065 LINC01615-202ENST00000449466 603 ntTSL 3 BASIC16.51■□□□□ 0.23
SLC6A12P48065 TTLL12-204ENST00000494035 888 ntTSL 2 BASIC16.51■□□□□ 0.23
SLC6A12P48065 AP002490.2-201ENST00000524791 560 ntBASIC16.51■□□□□ 0.23
SLC6A12P48065 GRTP1-205ENST00000620217 1073 ntTSL 2 BASIC16.51■□□□□ 0.23
SLC6A12P48065 TP73-AS1-207ENST00000624167 988 ntBASIC16.51■□□□□ 0.23
SLC6A12P48065 RAB8A-201ENST00000300935 2827 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
SLC6A12P48065 MMEL1-201ENST00000378412 2849 ntAPPRIS P1 TSL 2 BASIC16.51■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 27.6 ms