Protein–RNA interactions for Protein: P35251

RFC1, Replication factor C subunit 1, humanhuman

Predicted RBP Predictions only

Length 1,148 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1P35251 MRPL28-203ENST00000429738 310 ntTSL 2 BASIC18.11■□□□□ 0.49
RFC1P35251 AC078883.2-201ENST00000441212 558 ntTSL 3 BASIC18.11■□□□□ 0.49
RFC1P35251 PRYP5-201ENST00000451909 266 ntBASIC18.11■□□□□ 0.49
RFC1P35251 BX005266.1-201ENST00000473402 457 ntBASIC18.11■□□□□ 0.49
RFC1P35251 AC034243.1-201ENST00000520838 587 ntTSL 2 BASIC18.11■□□□□ 0.49
RFC1P35251 REXO1L6P-202ENST00000619970 1078 ntBASIC18.11■□□□□ 0.49
RFC1P35251 NPAS4-204ENST00000639555 878 ntTSL 5 BASIC18.11■□□□□ 0.49
RFC1P35251 RAPGEFL1-212ENST00000620260 3855 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
RFC1P35251 GTPBP8-203ENST00000383678 1360 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
RFC1P35251 GNAI2-204ENST00000440628 1663 ntTSL 5 BASIC18.11■□□□□ 0.49
RFC1P35251 ARHGEF4-205ENST00000409359 5489 ntTSL 5 BASIC18.11■□□□□ 0.49
RFC1P35251 SFTPB-202ENST00000409383 1867 ntAPPRIS P2 TSL 1 (best) BASIC18.11■□□□□ 0.49
RFC1P35251 SLC3A2-201ENST00000338663 1904 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
RFC1P35251 HMCN2-204ENST00000611173 1920 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
RFC1P35251 ALDH3B1-208ENST00000617288 2078 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
RFC1P35251 CCZ1-207ENST00000628813 2218 ntTSL 2 BASIC18.11■□□□□ 0.49
RFC1P35251 SBNO2-204ENST00000587024 4861 ntAPPRIS ALT2 TSL 2 BASIC18.11■□□□□ 0.49
RFC1P35251 PDE2A-226ENST00000544570 3119 ntTSL 5 BASIC18.1■□□□□ 0.49
RFC1P35251 KCNC1-202ENST00000379472 7965 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
RFC1P35251 CSF1-204ENST00000369802 2484 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
RFC1P35251 ASIC3-203ENST00000357922 2232 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
RFC1P35251 IFNGR1-201ENST00000367739 2139 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
RFC1P35251 UBE3D-203ENST00000369747 1917 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
RFC1P35251 THAP8-201ENST00000292894 1825 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
RFC1P35251 SPRED2-206ENST00000443619 1800 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
RFC1P35251 GIT2-202ENST00000354574 5387 ntTSL 5 BASIC18.1■□□□□ 0.49
RFC1P35251 ASL-205ENST00000395332 1622 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
RFC1P35251 AKR1C7P-201ENST00000305623 895 ntBASIC18.1■□□□□ 0.49
RFC1P35251 CMTM1-204ENST00000336328 606 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
RFC1P35251 PRSS38-201ENST00000366757 1267 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
RFC1P35251 C6orf48-203ENST00000375638 847 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
RFC1P35251 C6orf48-207ENST00000375642 962 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
RFC1P35251 CD99-205ENST00000381192 1245 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
RFC1P35251 GOSR2-202ENST00000393456 788 ntTSL 3 BASIC18.1■□□□□ 0.49
RFC1P35251 ACTG1P4-201ENST00000425123 1122 ntBASIC18.1■□□□□ 0.49
RFC1P35251 AL611929.1-201ENST00000457340 449 ntTSL 3 BASIC18.1■□□□□ 0.49
RFC1P35251 HOXB-AS4-202ENST00000480386 566 ntTSL 4 BASIC18.1■□□□□ 0.49
RFC1P35251 KNCN-203ENST00000481882 1037 ntAPPRIS ALT2 TSL 5 BASIC18.1■□□□□ 0.49
RFC1P35251 NDUFB9-204ENST00000518008 789 ntTSL 2 BASIC18.1■□□□□ 0.49
RFC1P35251 SDHD-206ENST00000528182 754 ntTSL 3 BASIC18.1■□□□□ 0.49
RFC1P35251 CMTM1-213ENST00000529506 581 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
RFC1P35251 PLPP5-214ENST00000531823 875 ntTSL 3 BASIC18.1■□□□□ 0.49
RFC1P35251 AC135776.2-201ENST00000567803 714 ntTSL 4 BASIC18.1■□□□□ 0.49
RFC1P35251 AL590235.2-202ENST00000602543 594 ntTSL 5 BASIC18.1■□□□□ 0.49
RFC1P35251 AL355877.3-201ENST00000622820 899 ntBASIC18.1■□□□□ 0.49
RFC1P35251 MEPCE-201ENST00000310512 3030 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
RFC1P35251 BCAM-206ENST00000589651 2686 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
RFC1P35251 NOMO1-208ENST00000620755 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
RFC1P35251 ZDHHC8-202ENST00000334554 5046 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
RFC1P35251 NCAPH2-203ENST00000395701 2077 ntTSL 2 BASIC18.1■□□□□ 0.49
RFC1P35251 AC092068.3-201ENST00000587894 2016 ntBASIC18.1■□□□□ 0.49
RFC1P35251 BATF2-202ENST00000435842 1949 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
RFC1P35251 WIPF1-201ENST00000272746 3028 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
RFC1P35251 RUNX1-201ENST00000300305 6222 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
RFC1P35251 ZSCAN18-201ENST00000240727 2779 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
RFC1P35251 RGN-202ENST00000352078 1611 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
RFC1P35251 CSNK1D-204ENST00000398519 1580 ntTSL 5 BASIC18.09■□□□□ 0.49
RFC1P35251 KDM4B-201ENST00000159111 5593 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
RFC1P35251 PIGF-201ENST00000281382 1372 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
RFC1P35251 SLC47A1-209ENST00000575023 2224 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
RFC1P35251 INS-201ENST00000250971 503 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
RFC1P35251 MCL1-201ENST00000307940 1110 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
RFC1P35251 INSL3-201ENST00000317306 755 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
RFC1P35251 IFT27-201ENST00000340630 1113 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
RFC1P35251 KLHDC7B-201ENST00000395676 2991 ntAPPRIS P1 BASIC18.09■□□□□ 0.49
RFC1P35251 AL022314.1-201ENST00000414203 464 ntTSL 5 BASIC18.09■□□□□ 0.49
RFC1P35251 S100A2-206ENST00000497140 697 ntTSL 2 BASIC18.09■□□□□ 0.49
RFC1P35251 TMEM218-203ENST00000526175 972 ntAPPRIS P1 TSL 3 BASIC18.09■□□□□ 0.49
RFC1P35251 GPHA2-202ENST00000532246 466 ntTSL 3 BASIC18.09■□□□□ 0.49
RFC1P35251 REXO2-206ENST00000539275 710 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
RFC1P35251 PSME1-205ENST00000559123 1033 ntTSL 5 BASIC18.09■□□□□ 0.49
RFC1P35251 MRPL21-208ENST00000567045 932 ntTSL 2 BASIC18.09■□□□□ 0.49
RFC1P35251 TRAF7-205ENST00000567653 666 ntTSL 2 BASIC18.09■□□□□ 0.49
RFC1P35251 FGF11-204ENST00000575235 928 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
RFC1P35251 CDC25A-202ENST00000351231 3663 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
RFC1P35251 ADAM22-202ENST00000398201 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
RFC1P35251 AL356309.3-201ENST00000624132 1934 ntBASIC18.09■□□□□ 0.49
RFC1P35251 AGXT-201ENST00000307503 1865 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
RFC1P35251 CROCCP3-201ENST00000263511 5368 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
RFC1P35251 HPN-202ENST00000392226 1783 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
RFC1P35251 SQOR-208ENST00000568606 1792 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
RFC1P35251 AFMID-201ENST00000327898 1700 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
RFC1P35251 ADM5-201ENST00000420022 1718 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
RFC1P35251 AD000671.3-202ENST00000591091 1712 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
RFC1P35251 ARID5A-203ENST00000454558 3079 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
RFC1P35251 ALOX12-201ENST00000251535 2358 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
RFC1P35251 TMEM37-201ENST00000306406 1688 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
RFC1P35251 OSBPL9-222ENST00000531828 2210 ntTSL 5 BASIC18.08■□□□□ 0.49
RFC1P35251 LTBP2-205ENST00000556690 5614 ntAPPRIS ALT2 TSL 5 BASIC18.08■□□□□ 0.49
RFC1P35251 PPP1R3G-201ENST00000405617 4907 ntAPPRIS P1 BASIC18.08■□□□□ 0.49
RFC1P35251 ABCB9-207ENST00000442833 2587 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
RFC1P35251 TTC13-202ENST00000366662 3112 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.49
RFC1P35251 GID4-202ENST00000376345 1391 ntTSL 3 BASIC18.08■□□□□ 0.49
RFC1P35251 HRAT92-201ENST00000452622 3506 ntTSL 2 BASIC18.08■□□□□ 0.49
RFC1P35251 ADCYAP1R1-203ENST00000409363 1889 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.49
RFC1P35251 TMTC4-203ENST00000376234 3483 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
RFC1P35251 ESM1-201ENST00000381403 1326 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
RFC1P35251 PLEKHG4-205ENST00000450733 4480 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.48
RFC1P35251 LRCH2-201ENST00000317135 4929 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.48
RFC1P35251 GOSR2-201ENST00000225567 1245 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 28.2 ms