Protein–RNA interactions for Protein: P24386

CHM, Rab proteins geranylgeranyltransferase component A 1, humanhuman

Predictions only

Length 653 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP24386 PCNP-201ENST00000265260 2342 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CHMP24386 ATAD3A-207ENST00000536055 2332 ntTSL 2 BASIC16.1■□□□□ 0.17
CHMP24386 RMND5B-201ENST00000313386 1929 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CHMP24386 MAT2A-202ENST00000409017 1927 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
CHMP24386 RHBDF1P1-201ENST00000427504 1941 ntBASIC16.09■□□□□ 0.17
CHMP24386 TSPAN17-209ENST00000515708 2361 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CHMP24386 ZNF385A-212ENST00000551109 2369 ntTSL 5 BASIC16.09■□□□□ 0.17
CHMP24386 RPAIN-203ENST00000381209 1535 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CHMP24386 SYBU-224ENST00000529690 1983 ntAPPRIS ALT2 TSL 2 BASIC16.09■□□□□ 0.17
CHMP24386 LAT2-204ENST00000398475 2453 ntAPPRIS P2 TSL 1 (best) BASIC16.09■□□□□ 0.17
CHMP24386 TRAPPC11-201ENST00000334690 4552 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CHMP24386 KCNV2-201ENST00000382082 2186 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CHMP24386 FAM184A-201ENST00000338891 4141 ntAPPRIS P4 TSL 1 (best) BASIC16.09■□□□□ 0.17
CHMP24386 IGF2-204ENST00000381406 5179 ntAPPRIS ALT1 TSL 2 BASIC16.09■□□□□ 0.17
CHMP24386 RBM6-210ENST00000442092 2260 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
CHMP24386 CXorf58-201ENST00000379211 1752 ntAPPRIS P2 TSL 1 (best) BASIC16.09■□□□□ 0.17
CHMP24386 SIT1-201ENST00000259608 1231 ntAPPRIS P2 TSL 1 (best) BASIC16.09■□□□□ 0.17
CHMP24386 ATP5J-201ENST00000284971 614 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CHMP24386 SUMF2-203ENST00000395435 1287 ntTSL 2 BASIC16.09■□□□□ 0.17
CHMP24386 DHRS4-203ENST00000397075 727 ntTSL 2 BASIC16.09■□□□□ 0.17
CHMP24386 C2orf82-202ENST00000409230 663 ntAPPRIS P2 TSL 3 BASIC16.09■□□□□ 0.17
CHMP24386 TMEM213-202ENST00000413208 480 ntAPPRIS ALT2 TSL 3 BASIC16.09■□□□□ 0.17
CHMP24386 ANKRD34C-AS1-205ENST00000560452 576 ntTSL 4 BASIC16.09■□□□□ 0.17
CHMP24386 ATP6V0C-202ENST00000564973 1081 ntTSL 2 BASIC16.09■□□□□ 0.17
CHMP24386 CTDNEP1-207ENST00000572043 857 ntTSL 3 BASIC16.09■□□□□ 0.17
CHMP24386 MIR5100-201ENST00000579544 119 ntBASIC16.09■□□□□ 0.17
CHMP24386 AC010632.1-201ENST00000590376 572 ntTSL 4 BASIC16.09■□□□□ 0.17
CHMP24386 FLT3LG-206ENST00000597551 951 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CHMP24386 AC022150.1-201ENST00000599222 640 ntTSL 3 BASIC16.09■□□□□ 0.17
CHMP24386 ZSCAN1-203ENST00000601162 813 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
CHMP24386 AL591684.3-201ENST00000605187 298 ntBASIC16.09■□□□□ 0.17
CHMP24386 RAB34-226ENST00000636772 1180 ntTSL 5 BASIC16.09■□□□□ 0.17
CHMP24386 PTPN11-207ENST00000639857 801 ntTSL 5 BASIC16.09■□□□□ 0.17
CHMP24386 CACNB3-202ENST00000536187 1872 ntTSL 2 BASIC16.09■□□□□ 0.17
CHMP24386 MFSD11-207ENST00000586622 2952 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
CHMP24386 ZDHHC9-202ENST00000371064 2473 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CHMP24386 KLF10-201ENST00000285407 3097 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CHMP24386 SLC29A2-202ENST00000357440 2514 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CHMP24386 PPA2-202ENST00000348706 1414 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
CHMP24386 LINC01105-206ENST00000456327 1434 ntTSL 5 BASIC16.09■□□□□ 0.17
CHMP24386 CFC1B-203ENST00000620207 1444 ntTSL 5 BASIC16.09■□□□□ 0.17
CHMP24386 CFC1-203ENST00000621673 1444 ntTSL 2 BASIC16.09■□□□□ 0.17
CHMP24386 DLG4-202ENST00000399506 3185 ntAPPRIS ALT1 TSL 2 BASIC16.09■□□□□ 0.17
CHMP24386 IDH3G-201ENST00000217901 1485 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CHMP24386 SGPP2-201ENST00000321276 3336 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CHMP24386 CICP6-201ENST00000457191 2729 ntBASIC16.09■□□□□ 0.17
CHMP24386 TCP10L2-202ENST00000366832 2185 ntAPPRIS P2 TSL 1 (best) BASIC16.09■□□□□ 0.17
CHMP24386 CAMK1D-201ENST00000378845 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
CHMP24386 ELMO3-203ENST00000477898 2281 ntAPPRIS ALT2 TSL 2 BASIC16.08■□□□□ 0.17
CHMP24386 TMED3-203ENST00000536821 2265 ntTSL 2 BASIC16.08■□□□□ 0.17
CHMP24386 SARS2-212ENST00000600042 1630 ntTSL 2 BASIC16.08■□□□□ 0.17
CHMP24386 SQLE-201ENST00000265896 2961 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
CHMP24386 ZNF18-204ENST00000580306 2330 ntAPPRIS P3 TSL 2 BASIC16.08■□□□□ 0.17
CHMP24386 AC116353.5-201ENST00000638148 1699 ntBASIC16.08■□□□□ 0.17
CHMP24386 GDF5-201ENST00000374369 2383 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
CHMP24386 TOM1L1-204ENST00000570371 2442 ntTSL 5 BASIC16.08■□□□□ 0.17
CHMP24386 COBL-201ENST00000265136 5291 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
CHMP24386 HSPA8-224ENST00000534624 2463 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
CHMP24386 ADRA1A-204ENST00000380573 2548 ntAPPRIS P1 TSL 2 BASIC16.08■□□□□ 0.17
CHMP24386 LUC7L2-202ENST00000354926 2645 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
CHMP24386 HS6ST2-204ENST00000521489 2607 ntTSL 5 BASIC16.08■□□□□ 0.17
CHMP24386 ANTXRL-206ENST00000622632 1964 ntAPPRIS ALT2 TSL 5 BASIC16.08■□□□□ 0.16
CHMP24386 UNC13A-205ENST00000551649 6052 ntAPPRIS ALT2 TSL 5 BASIC16.08■□□□□ 0.16
CHMP24386 DFFB-203ENST00000341385 572 ntTSL 5 BASIC16.08■□□□□ 0.16
CHMP24386 AC099669.1-201ENST00000457331 456 ntTSL 3 BASIC16.08■□□□□ 0.16
CHMP24386 EIF5A2-203ENST00000474096 570 ntTSL 4 BASIC16.08■□□□□ 0.16
CHMP24386 TMEM135-209ENST00000532959 1149 ntTSL 2 BASIC16.08■□□□□ 0.16
CHMP24386 AL121894.2-201ENST00000602977 491 ntBASIC16.08■□□□□ 0.16
CHMP24386 IGHV3OR16-7-201ENST00000604106 360 ntBASIC16.08■□□□□ 0.16
CHMP24386 TLE2-204ENST00000455444 2253 ntTSL 5 BASIC16.08■□□□□ 0.16
CHMP24386 MAIP1-202ENST00000392290 1386 ntAPPRIS P2 TSL 1 (best) BASIC16.08■□□□□ 0.16
CHMP24386 SLC2A6-201ENST00000371897 2301 ntTSL 2 BASIC16.08■□□□□ 0.16
CHMP24386 TMEM50B-210ENST00000542230 2375 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
CHMP24386 SSH1-201ENST00000326470 2432 ntAPPRIS ALT2 TSL 2 BASIC16.08■□□□□ 0.16
CHMP24386 PYCR2-208ENST00000612039 1549 ntTSL 3 BASIC16.08■□□□□ 0.16
CHMP24386 PYCR2-209ENST00000612651 1538 ntTSL 5 BASIC16.08■□□□□ 0.16
CHMP24386 AC242426.3-201ENST00000440377 1571 ntTSL 2 BASIC16.08■□□□□ 0.16
CHMP24386 ASL-205ENST00000395332 1622 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
CHMP24386 KIF25-203ENST00000443060 1613 ntAPPRIS P1 TSL 5 BASIC16.08■□□□□ 0.16
CHMP24386 ALKBH5-203ENST00000541285 1605 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
CHMP24386 GFI1B-208ENST00000636263 1604 ntTSL 5 BASIC16.08■□□□□ 0.16
CHMP24386 SLC35G6-201ENST00000412468 1697 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
CHMP24386 SCRN2-202ENST00000407215 1779 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
CHMP24386 TINF2-201ENST00000267415 1852 ntAPPRIS P4 TSL 1 (best) BASIC16.08■□□□□ 0.16
CHMP24386 SEPT11-209ENST00000510515 1886 ntTSL 2 BASIC16.08■□□□□ 0.16
CHMP24386 CELF6-201ENST00000287202 3345 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
CHMP24386 ZNF503-201ENST00000372524 3347 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
CHMP24386 RABGGTA-201ENST00000216840 2088 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
CHMP24386 CTSL-203ENST00000343150 2177 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
CHMP24386 YTHDF3-215ENST00000621957 2387 ntAPPRIS ALT1 TSL 5 BASIC16.07■□□□□ 0.16
CHMP24386 RNF7-201ENST00000273480 2763 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
CHMP24386 OPRK1-205ENST00000612786 5196 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
CHMP24386 CACNG7-201ENST00000222212 1016 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
CHMP24386 CHCHD1-201ENST00000372833 835 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
CHMP24386 RCN1P2-201ENST00000398357 915 ntBASIC16.07■□□□□ 0.16
CHMP24386 C7orf34-201ENST00000409607 766 ntAPPRIS P2 TSL 1 (best) BASIC16.07■□□□□ 0.16
CHMP24386 THAP5-204ENST00000438865 868 ntTSL 2 BASIC16.07■□□□□ 0.16
CHMP24386 AC093459.1-201ENST00000444567 481 ntTSL 3 BASIC16.07■□□□□ 0.16
CHMP24386 UNC93B7-201ENST00000509439 705 ntBASIC16.07■□□□□ 0.16
CHMP24386 PLPP5-214ENST00000531823 875 ntTSL 3 BASIC16.07■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 21.3 ms