Protein–RNA interactions for Protein: P22894

MMP8, Neutrophil collagenase, humanhuman

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP8P22894 LINC00887-203ENST00000429578 1717 ntTSL 2 BASIC18.02■□□□□ 0.48
MMP8P22894 AC134772.1-202ENST00000435578 549 ntTSL 4 BASIC18.02■□□□□ 0.48
MMP8P22894 ITGB1BP1-205ENST00000456913 1043 ntTSL 2 BASIC18.02■□□□□ 0.48
MMP8P22894 MBL1P-201ENST00000480805 1424 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
MMP8P22894 ITGB1BP1-216ENST00000488451 874 ntTSL 3 BASIC18.02■□□□□ 0.48
MMP8P22894 AC067930.3-201ENST00000524808 701 ntTSL 3 BASIC18.02■□□□□ 0.48
MMP8P22894 TOLLIP-AS1-201ENST00000530897 939 ntBASIC18.02■□□□□ 0.48
MMP8P22894 AC002091.2-201ENST00000585297 402 ntTSL 2 BASIC18.02■□□□□ 0.48
MMP8P22894 RNF165-204ENST00000587853 2011 ntTSL 5 BASIC18.02■□□□□ 0.48
MMP8P22894 AC084018.2-201ENST00000613093 2607 ntBASIC18.02■□□□□ 0.48
MMP8P22894 SMIM20-205ENST00000614775 1190 ntTSL 5 BASIC18.02■□□□□ 0.48
MMP8P22894 MCRIP2-211ENST00000629534 341 ntTSL 2 BASIC18.02■□□□□ 0.48
MMP8P22894 AL132857.2-201ENST00000634305 1737 ntTSL 5 BASIC18.02■□□□□ 0.48
MMP8P22894 ADO-201ENST00000373783 3627 ntAPPRIS P1 BASIC18.02■□□□□ 0.48
MMP8P22894 SCARB2-201ENST00000264896 4792 ntAPPRIS P2 TSL 1 (best) BASIC18.02■□□□□ 0.47
MMP8P22894 PRPF31-203ENST00000419967 2269 ntTSL 5 BASIC18.02■□□□□ 0.47
MMP8P22894 OS9-205ENST00000413095 1660 ntTSL 2 BASIC18.02■□□□□ 0.47
MMP8P22894 RAB8A-201ENST00000300935 2827 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
MMP8P22894 ZNRF3-201ENST00000402174 2667 ntAPPRIS P3 TSL 2 BASIC18.02■□□□□ 0.47
MMP8P22894 PDE1C-206ENST00000396193 5109 ntAPPRIS P4 TSL 2 BASIC18.02■□□□□ 0.47
MMP8P22894 EPB41L3-204ENST00000540638 3370 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.47
MMP8P22894 GRB7-201ENST00000309156 2243 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
MMP8P22894 FAM91A1-201ENST00000334705 5511 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
MMP8P22894 AC005920.1-201ENST00000501718 2054 ntTSL 2 BASIC18.02■□□□□ 0.47
MMP8P22894 FBXO24-206ENST00000468962 1901 ntTSL 2 BASIC18.02■□□□□ 0.47
MMP8P22894 TMTC4-203ENST00000376234 3483 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
MMP8P22894 GALNT17-201ENST00000333538 3884 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
MMP8P22894 SLC2A5-201ENST00000377414 2344 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
MMP8P22894 AIFM3-201ENST00000399163 2309 ntAPPRIS ALT1 TSL 1 (best) BASIC18.01■□□□□ 0.47
MMP8P22894 TEX264-215ENST00000611400 1488 ntAPPRIS P3 TSL 5 BASIC18.01■□□□□ 0.47
MMP8P22894 PTHLH-203ENST00000395872 1318 ntAPPRIS ALT1 TSL 5 BASIC18.01■□□□□ 0.47
MMP8P22894 MAGEA4-206ENST00000393921 1727 ntAPPRIS P1 TSL 5 BASIC18.01■□□□□ 0.47
MMP8P22894 MGAT1-203ENST00000393340 3077 ntAPPRIS P1 TSL 2 BASIC18.01■□□□□ 0.47
MMP8P22894 ACTRT2-201ENST00000378404 1421 ntAPPRIS P1 BASIC18.01■□□□□ 0.47
MMP8P22894 PMS1-206ENST00000418224 3018 ntTSL 5 BASIC18.01■□□□□ 0.47
MMP8P22894 NDUFS7-201ENST00000233627 1039 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
MMP8P22894 GYG2P1-204ENST00000382966 639 ntTSL 3 BASIC18.01■□□□□ 0.47
MMP8P22894 FAM3A-205ENST00000393572 1041 ntTSL 2 BASIC18.01■□□□□ 0.47
MMP8P22894 DHRS12-203ENST00000444610 1162 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
MMP8P22894 LINC01615-202ENST00000449466 603 ntTSL 3 BASIC18.01■□□□□ 0.47
MMP8P22894 PAWRP1-201ENST00000451083 565 ntBASIC18.01■□□□□ 0.47
MMP8P22894 MPIG6B-210ENST00000480039 790 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
MMP8P22894 TTLL12-204ENST00000494035 888 ntTSL 2 BASIC18.01■□□□□ 0.47
MMP8P22894 NOP16-205ENST00000509257 1000 ntTSL 2 BASIC18.01■□□□□ 0.47
MMP8P22894 MRPL49-206ENST00000531705 489 ntTSL 5 BASIC18.01■□□□□ 0.47
MMP8P22894 ZFPM1-204ENST00000563351 808 ntTSL 2 BASIC18.01■□□□□ 0.47
MMP8P22894 PPP1R1B-208ENST00000580825 1038 ntAPPRIS P1 TSL 5 BASIC18.01■□□□□ 0.47
MMP8P22894 BIRC5-207ENST00000590449 568 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
MMP8P22894 TP73-AS1-207ENST00000624167 988 ntBASIC18.01■□□□□ 0.47
MMP8P22894 ACSM2A-213ENST00000575690 2322 ntAPPRIS P1 TSL 2 BASIC18.01■□□□□ 0.47
MMP8P22894 IL12RB1-201ENST00000322153 1902 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
MMP8P22894 GBGT1-204ENST00000372043 1935 ntTSL 2 BASIC18.01■□□□□ 0.47
MMP8P22894 KCNJ10-208ENST00000639408 1546 ntTSL 5 BASIC18.01■□□□□ 0.47
MMP8P22894 C16orf71-204ENST00000590191 2564 ntAPPRIS ALT2 TSL 5 BASIC18.01■□□□□ 0.47
MMP8P22894 ZNF232-201ENST00000250076 2179 ntAPPRIS P3 TSL 5 BASIC18.01■□□□□ 0.47
MMP8P22894 ELP5-202ENST00000356683 2197 ntTSL 5 BASIC18.01■□□□□ 0.47
MMP8P22894 SLC35E2B-204ENST00000614300 2156 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
MMP8P22894 CTD-3080P12.3-203ENST00000514376 1757 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
MMP8P22894 EZR-202ENST00000367075 3096 ntAPPRIS P2 TSL 1 (best) BASIC18.01■□□□□ 0.47
MMP8P22894 PITHD1-201ENST00000246151 1603 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
MMP8P22894 BNIP2-212ENST00000607373 1851 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
MMP8P22894 PFKP-202ENST00000381075 2769 ntTSL 2 BASIC18.01■□□□□ 0.47
MMP8P22894 CDC25A-202ENST00000351231 3663 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
MMP8P22894 ZDHHC2-201ENST00000262096 6377 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
MMP8P22894 GGT6-203ENST00000573591 1730 ntTSL 4 BASIC18.01■□□□□ 0.47
MMP8P22894 TTLL5-219ENST00000556977 1961 ntTSL 1 (best) BASIC18■□□□□ 0.47
MMP8P22894 ASB16-AS1-201ENST00000585457 2213 ntTSL 2 BASIC18■□□□□ 0.47
MMP8P22894 GHDC-202ENST00000414034 2496 ntTSL 2 BASIC18■□□□□ 0.47
MMP8P22894 SGK3-206ENST00000520976 2483 ntTSL 2 BASIC18■□□□□ 0.47
MMP8P22894 RUNX1-203ENST00000358356 2720 ntTSL 1 (best) BASIC18■□□□□ 0.47
MMP8P22894 SETD3-201ENST00000329331 1330 ntTSL 1 (best) BASIC18■□□□□ 0.47
MMP8P22894 PTPRC-206ENST00000413409 1338 ntTSL 1 (best) BASIC18■□□□□ 0.47
MMP8P22894 KCNK7-203ENST00000394216 1563 ntTSL 1 (best) BASIC18■□□□□ 0.47
MMP8P22894 LINC00894-202ENST00000425602 1597 ntTSL 2 BASIC18■□□□□ 0.47
MMP8P22894 KRT86-201ENST00000293525 2091 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
MMP8P22894 DOLK-201ENST00000372586 2090 ntAPPRIS P1 BASIC18■□□□□ 0.47
MMP8P22894 MIB2-232ENST00000520777 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
MMP8P22894 ATXN7-210ENST00000487717 3683 ntAPPRIS P3 TSL 5 BASIC18■□□□□ 0.47
MMP8P22894 KCTD14-201ENST00000353172 1691 ntAPPRIS P3 TSL 1 (best) BASIC18■□□□□ 0.47
MMP8P22894 CXorf40B-205ENST00000462691 1440 ntAPPRIS ALT1 TSL 3 BASIC18■□□□□ 0.47
MMP8P22894 KCNQ2-202ENST00000344462 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
MMP8P22894 ARHGAP33-201ENST00000007510 2545 ntAPPRIS ALT2 TSL 5 BASIC18■□□□□ 0.47
MMP8P22894 MPP1-202ENST00000369534 2042 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
MMP8P22894 ADGRG3-202ENST00000450388 1785 ntAPPRIS ALT2 TSL 2 BASIC18■□□□□ 0.47
MMP8P22894 RAB3IP-207ENST00000483530 1755 ntTSL 1 (best) BASIC18■□□□□ 0.47
MMP8P22894 LITAF-202ENST00000381810 1527 ntTSL 5 BASIC18■□□□□ 0.47
MMP8P22894 EIF6-202ENST00000374443 1017 ntTSL 5 BASIC18■□□□□ 0.47
MMP8P22894 ODF3B-202ENST00000401779 869 ntTSL 1 (best) BASIC18■□□□□ 0.47
MMP8P22894 ODF3B-203ENST00000403326 643 ntTSL 3 BASIC18■□□□□ 0.47
MMP8P22894 AL596442.1-201ENST00000429305 429 ntTSL 2 BASIC18■□□□□ 0.47
MMP8P22894 AL137026.1-202ENST00000452578 1089 ntTSL 2 BASIC18■□□□□ 0.47
MMP8P22894 AL512357.1-201ENST00000557687 518 ntTSL 4 BASIC18■□□□□ 0.47
MMP8P22894 TUBB4A-209ENST00000598006 565 ntTSL 2 BASIC18■□□□□ 0.47
MMP8P22894 AL121912.1-201ENST00000603683 238 ntBASIC18■□□□□ 0.47
MMP8P22894 SMIM22-210ENST00000615471 928 ntAPPRIS ALT2 TSL 3 BASIC18■□□□□ 0.47
MMP8P22894 NRBP2-202ENST00000442628 3587 ntAPPRIS P1 TSL 2 BASIC18■□□□□ 0.47
MMP8P22894 AL731569.1-201ENST00000428940 3058 ntTSL 2 BASIC18■□□□□ 0.47
MMP8P22894 COL16A1-203ENST00000373672 5736 ntAPPRIS P1 TSL 5 BASIC18■□□□□ 0.47
MMP8P22894 MMEL1-201ENST00000378412 2849 ntAPPRIS P1 TSL 2 BASIC18■□□□□ 0.47
MMP8P22894 ZBTB33-201ENST00000326624 5211 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 200.9 ms