Protein–RNA interactions for Protein: P11388

TOP2A, DNA topoisomerase 2-alpha, humanhuman

Known RBP Predictions only

Length 1,531 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOP2AP11388 OVOL1-203ENST00000532448 1774 ntTSL 1 (best) BASIC29.6■■■□□ 2.33
TOP2AP11388 EFHD2-201ENST00000375980 2419 ntAPPRIS P1 TSL 1 (best) BASIC29.59■■■□□ 2.33
TOP2AP11388 PPM1B-201ENST00000282412 2606 ntAPPRIS P4 TSL 1 (best) BASIC29.59■■■□□ 2.33
TOP2AP11388 CFLAR-208ENST00000423241 2128 ntAPPRIS P3 TSL 1 (best) BASIC29.59■■■□□ 2.33
TOP2AP11388 BFSP1-201ENST00000377868 2063 ntTSL 1 (best) BASIC29.59■■■□□ 2.33
TOP2AP11388 OCIAD1-202ENST00000381473 1594 ntAPPRIS P1 TSL 1 (best) BASIC29.59■■■□□ 2.33
TOP2AP11388 CTRC-202ENST00000375949 898 ntAPPRIS P1 TSL 1 (best) BASIC29.59■■■□□ 2.33
TOP2AP11388 STMN1-204ENST00000426559 948 ntTSL 1 (best) BASIC29.59■■■□□ 2.33
TOP2AP11388 LEPROTL1-202ENST00000442880 908 ntTSL 2 BASIC29.59■■■□□ 2.33
TOP2AP11388 GNG4-205ENST00000484517 684 ntAPPRIS P1 TSL 2 BASIC29.59■■■□□ 2.33
TOP2AP11388 FKBP11-208ENST00000550765 1030 ntAPPRIS P3 TSL 1 (best) BASIC29.59■■■□□ 2.33
TOP2AP11388 CCDC85C-204ENST00000555822 930 ntTSL 5 BASIC29.59■■■□□ 2.33
TOP2AP11388 AC040162.1-202ENST00000573493 573 ntAPPRIS P1 TSL 3 BASIC29.59■■■□□ 2.33
TOP2AP11388 ARMC7-205ENST00000584947 445 ntTSL 3 BASIC29.59■■■□□ 2.33
TOP2AP11388 AC087645.4-201ENST00000638890 792 ntTSL 5 BASIC29.59■■■□□ 2.33
TOP2AP11388 TRIM17-201ENST00000295033 1730 ntAPPRIS P1 TSL 1 (best) BASIC29.59■■■□□ 2.33
TOP2AP11388 SMARCC2-201ENST00000267064 4076 ntAPPRIS P4 TSL 1 (best) BASIC29.59■■■□□ 2.33
TOP2AP11388 GORASP1-206ENST00000422110 2523 ntTSL 2 BASIC29.59■■■□□ 2.33
TOP2AP11388 PLTP-204ENST00000420868 1420 ntTSL 2 BASIC29.59■■■□□ 2.33
TOP2AP11388 AC016396.2-201ENST00000562575 1417 ntBASIC29.59■■■□□ 2.33
TOP2AP11388 DNM1-211ENST00000627061 2724 ntTSL 5 BASIC29.59■■■□□ 2.33
TOP2AP11388 SLC39A3-202ENST00000455372 2940 ntTSL 1 (best) BASIC29.59■■■□□ 2.33
TOP2AP11388 FOXC1-201ENST00000380874 3926 ntAPPRIS P1 BASIC29.58■■■□□ 2.33
TOP2AP11388 SPART-209ENST00000494062 3018 ntAPPRIS P1 TSL 1 (best) BASIC29.58■■■□□ 2.33
TOP2AP11388 PLD3-206ENST00000409587 2180 ntAPPRIS P1 TSL 5 BASIC29.58■■■□□ 2.33
TOP2AP11388 TSPAN4-208ENST00000409531 1339 ntTSL 5 BASIC29.58■■■□□ 2.33
TOP2AP11388 GALNT9-202ENST00000397325 1727 ntTSL 1 (best) BASIC29.58■■■□□ 2.33
TOP2AP11388 RGS20-201ENST00000276500 1664 ntAPPRIS P1 TSL 1 (best) BASIC29.58■■■□□ 2.33
TOP2AP11388 PABPN1L-202ENST00000419291 1272 ntAPPRIS P1 TSL 1 (best) BASIC29.58■■■□□ 2.33
TOP2AP11388 UCHL1-204ENST00000503431 917 ntAPPRIS P1 TSL 3 BASIC29.58■■■□□ 2.33
TOP2AP11388 ASXL1-206ENST00000542461 1068 ntTSL 5 BASIC29.58■■■□□ 2.33
TOP2AP11388 MPI-209ENST00000564003 1195 ntTSL 2 BASIC29.58■■■□□ 2.33
TOP2AP11388 AC138474.1-201ENST00000586630 523 ntTSL 3 BASIC29.58■■■□□ 2.33
TOP2AP11388 AL132655.2-201ENST00000596276 594 ntBASIC29.58■■■□□ 2.33
TOP2AP11388 GTF3C5-202ENST00000372097 2406 ntAPPRIS P3 TSL 1 (best) BASIC29.58■■■□□ 2.33
TOP2AP11388 AC068446.2-201ENST00000500487 2165 ntTSL 2 BASIC29.58■■■□□ 2.33
TOP2AP11388 CASP16P-202ENST00000575497 2161 ntTSL 2 BASIC29.58■■■□□ 2.33
TOP2AP11388 STX3-203ENST00000529177 1571 ntTSL 2 BASIC29.58■■■□□ 2.33
TOP2AP11388 FBXO24-202ENST00000427939 2087 ntTSL 2 BASIC29.58■■■□□ 2.33
TOP2AP11388 ANKRD20A5P-207ENST00000581935 2089 ntTSL 2 BASIC29.58■■■□□ 2.33
TOP2AP11388 SLC2A11-204ENST00000398356 2388 ntTSL 1 (best) BASIC29.57■■■□□ 2.32
TOP2AP11388 AC068898.1-201ENST00000440750 335 ntTSL 3 BASIC29.57■■■□□ 2.32
TOP2AP11388 AL158198.1-201ENST00000449143 380 ntTSL 3 BASIC29.57■■■□□ 2.32
TOP2AP11388 AL359815.1-201ENST00000457706 821 ntTSL 2 BASIC29.57■■■□□ 2.32
TOP2AP11388 KRT18P34-201ENST00000488218 1270 ntBASIC29.57■■■□□ 2.32
TOP2AP11388 AC122138.1-201ENST00000508799 646 ntTSL 2 BASIC29.57■■■□□ 2.32
TOP2AP11388 ZNF890P-202ENST00000530367 1156 ntBASIC29.57■■■□□ 2.32
TOP2AP11388 MYMX-202ENST00000576476 682 ntAPPRIS P1 TSL 3 BASIC29.57■■■□□ 2.32
TOP2AP11388 VAT1-205ENST00000587173 1174 ntTSL 2 BASIC29.57■■■□□ 2.32
TOP2AP11388 APLNR-203ENST00000611099 1789 ntAPPRIS P1 TSL 1 (best) BASIC29.57■■■□□ 2.32
TOP2AP11388 CHID1-215ENST00000528581 1431 ntTSL 2 BASIC29.57■■■□□ 2.32
TOP2AP11388 AL138688.1-201ENST00000624851 1594 ntBASIC29.57■■■□□ 2.32
TOP2AP11388 LLGL2-203ENST00000392550 3509 ntAPPRIS P2 TSL 1 (best) BASIC29.57■■■□□ 2.32
TOP2AP11388 MZF1-203ENST00000594234 2385 ntTSL 1 (best) BASIC29.57■■■□□ 2.32
TOP2AP11388 LSP1-202ENST00000381775 2016 ntAPPRIS ALT2 TSL 2 BASIC29.57■■■□□ 2.32
TOP2AP11388 RAPGEF5-203ENST00000405243 2800 ntTSL 1 (best) BASIC29.57■■■□□ 2.32
TOP2AP11388 TPR-209ENST00000613151 2478 ntTSL 5 BASIC29.57■■■□□ 2.32
TOP2AP11388 TNFAIP1-202ENST00000544907 1656 ntTSL 2 BASIC29.57■■■□□ 2.32
TOP2AP11388 SRP68-201ENST00000307877 2649 ntAPPRIS P1 TSL 1 (best) BASIC29.57■■■□□ 2.32
TOP2AP11388 LINC01097-201ENST00000627163 2122 ntTSL 2 BASIC29.57■■■□□ 2.32
TOP2AP11388 DHRS4L2-205ENST00000543805 1334 ntTSL 5 BASIC29.57■■■□□ 2.32
TOP2AP11388 PCID2-203ENST00000375457 2372 ntTSL 1 (best) BASIC29.56■■■□□ 2.32
TOP2AP11388 RBM3-202ENST00000376755 1130 ntAPPRIS P1 TSL 2 BASIC29.56■■■□□ 2.32
TOP2AP11388 LRP5L-201ENST00000402785 1193 ntAPPRIS P2 TSL 1 (best) BASIC29.56■■■□□ 2.32
TOP2AP11388 SNHG17-203ENST00000417578 880 ntTSL 2 BASIC29.56■■■□□ 2.32
TOP2AP11388 RAB3A-202ENST00000464076 1253 ntTSL 2 BASIC29.56■■■□□ 2.32
TOP2AP11388 REEP4-207ENST00000523293 913 ntTSL 3 BASIC29.56■■■□□ 2.32
TOP2AP11388 CD4-210ENST00000541982 1187 ntTSL 1 (best) BASIC29.56■■■□□ 2.32
TOP2AP11388 EIF6-209ENST00000621148 1054 ntAPPRIS P1 TSL 3 BASIC29.56■■■□□ 2.32
TOP2AP11388 ZFP64-205ENST00000371518 1841 ntTSL 1 (best) BASIC29.56■■■□□ 2.32
TOP2AP11388 PNCK-202ENST00000370142 1525 ntTSL 5 BASIC29.56■■■□□ 2.32
TOP2AP11388 DIDO1-203ENST00000370366 2383 ntTSL 1 (best) BASIC29.56■■■□□ 2.32
TOP2AP11388 PGR-201ENST00000263463 2496 ntTSL 1 (best) BASIC29.56■■■□□ 2.32
TOP2AP11388 GNPTAB-201ENST00000299314 5701 ntAPPRIS P1 TSL 1 (best) BASIC29.56■■■□□ 2.32
TOP2AP11388 GOLGA2P9-203ENST00000600260 2033 ntTSL 1 (best) BASIC29.56■■■□□ 2.32
TOP2AP11388 LDHD-202ENST00000450168 1966 ntAPPRIS ALT2 TSL 1 (best) BASIC29.56■■■□□ 2.32
TOP2AP11388 IL17RC-201ENST00000295981 2621 ntAPPRIS P4 TSL 2 BASIC29.56■■■□□ 2.32
TOP2AP11388 AL161785.2-201ENST00000427080 966 ntTSL 3 BASIC29.55■■■□□ 2.32
TOP2AP11388 AL121753.1-201ENST00000444717 529 ntAPPRIS P1 TSL 3 BASIC29.55■■■□□ 2.32
TOP2AP11388 CXCL6-203ENST00000515050 557 ntAPPRIS ALT1 TSL 1 (best) BASIC29.55■■■□□ 2.32
TOP2AP11388 WASH4P-201ENST00000564273 1246 ntBASIC29.55■■■□□ 2.32
TOP2AP11388 ZNF655-225ENST00000626122 705 ntTSL 5 BASIC29.55■■■□□ 2.32
TOP2AP11388 RAB34-223ENST00000636154 730 ntTSL 2 BASIC29.55■■■□□ 2.32
TOP2AP11388 SERF2-203ENST00000381359 1931 ntAPPRIS P1 TSL 1 (best) BASIC29.55■■■□□ 2.32
TOP2AP11388 NFYC-210ENST00000425457 1536 ntTSL 2 BASIC29.55■■■□□ 2.32
TOP2AP11388 AKT2-210ENST00000424901 5170 ntTSL 5 BASIC29.55■■■□□ 2.32
TOP2AP11388 DPEP1-203ENST00000421184 1647 ntAPPRIS P1 TSL 5 BASIC29.55■■■□□ 2.32
TOP2AP11388 FAM198A-202ENST00000430121 3121 ntAPPRIS P2 TSL 5 BASIC29.55■■■□□ 2.32
TOP2AP11388 RAVER1-207ENST00000615032 1952 ntAPPRIS ALT2 TSL 5 BASIC29.55■■■□□ 2.32
TOP2AP11388 TUFM-201ENST00000313511 2071 ntAPPRIS P1 TSL 1 (best) BASIC29.55■■■□□ 2.32
TOP2AP11388 CMTM3-214ENST00000567572 1934 ntAPPRIS P1 TSL 1 (best) BASIC29.55■■■□□ 2.32
TOP2AP11388 FPGS-201ENST00000373225 2278 ntTSL 2 BASIC29.55■■■□□ 2.32
TOP2AP11388 RUVBL1-201ENST00000322623 1761 ntAPPRIS P1 TSL 1 (best) BASIC29.55■■■□□ 2.32
TOP2AP11388 LTA-214ENST00000454783 1507 ntAPPRIS P1 TSL 2 BASIC29.55■■■□□ 2.32
TOP2AP11388 LINC01116-202ENST00000339037 838 ntTSL 3 BASIC29.55■■■□□ 2.32
TOP2AP11388 ASMT-201ENST00000381229 1087 ntAPPRIS P1 TSL 1 (best) BASIC29.55■■■□□ 2.32
TOP2AP11388 NME2P1-201ENST00000426182 414 ntBASIC29.55■■■□□ 2.32
TOP2AP11388 U91328.1-201ENST00000437528 223 ntBASIC29.55■■■□□ 2.32
TOP2AP11388 AC095060.1-201ENST00000502455 549 ntTSL 4 BASIC29.55■■■□□ 2.32
TOP2AP11388 CCDC25-209ENST00000522915 785 ntTSL 3 BASIC29.55■■■□□ 2.32
Retrieved 100 of 98,524 protein–RNA pairs in 32.4 ms