Protein–RNA interactions for Protein: P08684

CYP3A4, Cytochrome P450 3A4, humanhuman

Predictions only

Length 503 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CYP3A4P08684 LSP1-203ENST00000405957 1785 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
CYP3A4P08684 HARS-203ENST00000431330 1774 ntTSL 2 BASIC19.2■□□□□ 0.66
CYP3A4P08684 AC074386.1-202ENST00000463561 864 ntBASIC19.2■□□□□ 0.66
CYP3A4P08684 MRPL20-203ENST00000482352 1049 ntTSL 2 BASIC19.2■□□□□ 0.66
CYP3A4P08684 SMN2-210ENST00000511812 867 ntTSL 2 BASIC19.2■□□□□ 0.66
CYP3A4P08684 HOXC-AS3-202ENST00000513165 533 ntTSL 3 BASIC19.2■□□□□ 0.66
CYP3A4P08684 AC116021.1-201ENST00000530049 653 ntTSL 3 BASIC19.2■□□□□ 0.66
CYP3A4P08684 HIST4H4-204ENST00000539745 577 ntAPPRIS P1 BASIC19.2■□□□□ 0.66
CYP3A4P08684 AC013565.3-202ENST00000570120 460 ntTSL 2 BASIC19.2■□□□□ 0.66
CYP3A4P08684 MPDU1-223ENST00000582151 728 ntBASIC19.2■□□□□ 0.66
CYP3A4P08684 ELOF1-204ENST00000587806 1172 ntTSL 2 BASIC19.2■□□□□ 0.66
CYP3A4P08684 AC010776.2-201ENST00000588946 1081 ntTSL 2 BASIC19.2■□□□□ 0.66
CYP3A4P08684 MTDHP5-201ENST00000598980 586 ntBASIC19.2■□□□□ 0.66
CYP3A4P08684 TEX264-216ENST00000614067 1174 ntAPPRIS ALT2 TSL 3 BASIC19.2■□□□□ 0.66
CYP3A4P08684 MED16-214ENST00000617672 554 ntTSL 5 BASIC19.2■□□□□ 0.66
CYP3A4P08684 AL662799.1-201ENST00000630418 496 ntTSL 5 BASIC19.2■□□□□ 0.66
CYP3A4P08684 LINC01635-202ENST00000635097 1023 ntTSL 5 BASIC19.2■□□□□ 0.66
CYP3A4P08684 FOXD4L1-201ENST00000306507 2491 ntAPPRIS P1 BASIC19.2■□□□□ 0.66
CYP3A4P08684 ARL13B-203ENST00000394222 2453 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CYP3A4P08684 AP001094.4-201ENST00000579008 2176 ntBASIC19.2■□□□□ 0.66
CYP3A4P08684 AC099508.1-201ENST00000499110 1666 ntTSL 4 BASIC19.2■□□□□ 0.66
CYP3A4P08684 SLC22A20-204ENST00000530038 1673 ntBASIC19.2■□□□□ 0.66
CYP3A4P08684 PODNL1-201ENST00000254320 1859 ntTSL 2 BASIC19.2■□□□□ 0.66
CYP3A4P08684 TUSC3-204ENST00000506802 1546 ntTSL 5 BASIC19.2■□□□□ 0.66
CYP3A4P08684 RBFOX1-207ENST00000547338 1513 ntTSL 2 BASIC19.2■□□□□ 0.66
CYP3A4P08684 NUDT19-201ENST00000397061 2967 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
CYP3A4P08684 NTRK1-203ENST00000392302 2609 ntTSL 5 BASIC19.2■□□□□ 0.66
CYP3A4P08684 SLC38A6-202ENST00000354886 1730 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
CYP3A4P08684 SIL1-213ENST00000509534 1714 ntTSL 5 BASIC19.2■□□□□ 0.66
CYP3A4P08684 FNDC8-201ENST00000158009 1388 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CYP3A4P08684 VGLL4-211ENST00000430365 1377 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
CYP3A4P08684 TUBA4B-203ENST00000490341 1380 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
CYP3A4P08684 SCNN1D-206ENST00000400928 2731 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
CYP3A4P08684 PTPN6-204ENST00000456013 2389 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
CYP3A4P08684 BSG-202ENST00000346916 1605 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
CYP3A4P08684 BSG-203ENST00000353555 1616 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
CYP3A4P08684 FANCA-203ENST00000389302 1641 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
CYP3A4P08684 TES-201ENST00000358204 2782 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CYP3A4P08684 NOL4L-205ENST00000375678 2042 ntAPPRIS ALT2 TSL 2 BASIC19.19■□□□□ 0.66
CYP3A4P08684 SMOX-205ENST00000379460 2230 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
CYP3A4P08684 CNNM3-201ENST00000305510 3447 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CYP3A4P08684 EIF6-202ENST00000374443 1017 ntTSL 5 BASIC19.19■□□□□ 0.66
CYP3A4P08684 FALEC-201ENST00000416894 566 ntTSL 3 BASIC19.19■□□□□ 0.66
CYP3A4P08684 BAALC-AS2-201ENST00000436771 496 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
CYP3A4P08684 GSTK1-207ENST00000479303 1185 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
CYP3A4P08684 BATF2-204ENST00000527716 1230 ntTSL 2 BASIC19.19■□□□□ 0.66
CYP3A4P08684 SLC25A3P1-206ENST00000569142 925 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
CYP3A4P08684 MIR4492-201ENST00000581627 80 ntBASIC19.19■□□□□ 0.66
CYP3A4P08684 TMIGD2-203ENST00000600114 489 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
CYP3A4P08684 HOTTIP_1.1-201ENST00000620415 57 ntBASIC19.19■□□□□ 0.66
CYP3A4P08684 POC1A-201ENST00000296484 1898 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
CYP3A4P08684 DIABLO-204ENST00000413918 1859 ntTSL 2 BASIC19.19■□□□□ 0.66
CYP3A4P08684 PLCL2-204ENST00000615277 4147 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
CYP3A4P08684 TBXAS1-204ENST00000416849 2505 ntTSL 5 BASIC19.19■□□□□ 0.66
CYP3A4P08684 PODXL-202ENST00000378555 2105 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
CYP3A4P08684 FOXS1-201ENST00000375978 1319 ntAPPRIS P1 BASIC19.19■□□□□ 0.66
CYP3A4P08684 JAK2-201ENST00000381652 5285 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CYP3A4P08684 RIC8B-203ENST00000392839 2440 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
CYP3A4P08684 AC092068.3-201ENST00000587894 2016 ntBASIC19.18■□□□□ 0.66
CYP3A4P08684 AP003071.5-201ENST00000641568 2695 ntAPPRIS P1 BASIC19.18■□□□□ 0.66
CYP3A4P08684 SPDEF-201ENST00000374037 1895 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
CYP3A4P08684 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CYP3A4P08684 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC19.18■□□□□ 0.66
CYP3A4P08684 TTLL10-201ENST00000379288 2114 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
CYP3A4P08684 TIMM50-202ENST00000544017 2572 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
CYP3A4P08684 MYC-202ENST00000377970 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
CYP3A4P08684 ARNT-202ENST00000358595 4887 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
CYP3A4P08684 C6orf106-202ENST00000374023 4418 ntAPPRIS P4 TSL 1 (best) BASIC19.18■□□□□ 0.66
CYP3A4P08684 C6orf223-203ENST00000442114 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
CYP3A4P08684 PRLH-201ENST00000165524 264 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CYP3A4P08684 TYROBP-201ENST00000262629 568 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
CYP3A4P08684 SUV39H2-202ENST00000354919 1233 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
CYP3A4P08684 TMEM205-202ENST00000447337 916 ntAPPRIS P1 TSL 2 BASIC19.18■□□□□ 0.66
CYP3A4P08684 AL031432.2-201ENST00000566714 459 ntBASIC19.18■□□□□ 0.66
CYP3A4P08684 AL928711.1-201ENST00000570165 459 ntBASIC19.18■□□□□ 0.66
CYP3A4P08684 TWSG1-202ENST00000581641 1119 ntTSL 2 BASIC19.18■□□□□ 0.66
CYP3A4P08684 STX10-207ENST00000589083 1241 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
CYP3A4P08684 CROCCP3-203ENST00000589964 255 ntTSL 3 BASIC19.18■□□□□ 0.66
CYP3A4P08684 PGLYRP1-201ENST00000008938 720 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CYP3A4P08684 ETV3L-201ENST00000454449 1976 ntAPPRIS P1 TSL 2 BASIC19.18■□□□□ 0.66
CYP3A4P08684 ESR2-201ENST00000267525 1518 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
CYP3A4P08684 DPM2-201ENST00000314392 1542 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CYP3A4P08684 FAM178B-204ENST00000490605 2710 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
CYP3A4P08684 COBLL1-201ENST00000342193 4898 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
CYP3A4P08684 MYH14-208ENST00000598205 6137 ntAPPRIS P3 TSL 5 BASIC19.18■□□□□ 0.66
CYP3A4P08684 DPF2-205ENST00000528416 2799 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CYP3A4P08684 GLCCI1-201ENST00000223145 4743 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
CYP3A4P08684 GULP1-209ENST00000410051 1595 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
CYP3A4P08684 PHF20L1-201ENST00000220847 3297 ntTSL 5 BASIC19.18■□□□□ 0.66
CYP3A4P08684 THAP8-201ENST00000292894 1825 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CYP3A4P08684 GPR137-212ENST00000539851 1843 ntTSL 2 BASIC19.18■□□□□ 0.66
CYP3A4P08684 FGFBP1-201ENST00000382333 1359 ntAPPRIS P1 TSL 3 BASIC19.18■□□□□ 0.66
CYP3A4P08684 MRFAP1-205ENST00000617365 2112 ntTSL 5 BASIC19.18■□□□□ 0.66
CYP3A4P08684 ADCY5-202ENST00000462833 7311 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CYP3A4P08684 PRR15-201ENST00000319694 1678 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CYP3A4P08684 LMBR1L-204ENST00000547382 2235 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
CYP3A4P08684 SCAI-202ENST00000373549 1968 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
CYP3A4P08684 DNAH14-206ENST00000400952 1984 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
CYP3A4P08684 NF1-211ENST00000487476 2265 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
CYP3A4P08684 SEL1L3-202ENST00000399878 4520 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 42.9 ms