Protein–RNA interactions for Protein: P07384

CAPN1, Calpain-1 catalytic subunit, humanhuman

Predictions only

Length 714 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1P07384 NEIL2-203ENST00000436750 2226 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CAPN1P07384 BCAM-206ENST00000589651 2686 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
CAPN1P07384 AC060834.1-201ENST00000443027 2032 ntBASIC16.94■□□□□ 0.3
CAPN1P07384 HSPA8-224ENST00000534624 2463 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CAPN1P07384 TPD52L1-213ENST00000534000 2356 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
CAPN1P07384 ANKFY1-202ENST00000570535 6458 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
CAPN1P07384 SYVN1-203ENST00000377190 3052 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
CAPN1P07384 SUSD4-208ENST00000494793 1833 ntTSL 5 BASIC16.94■□□□□ 0.3
CAPN1P07384 SPAG6-203ENST00000376624 2605 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CAPN1P07384 DYM-201ENST00000269445 5049 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CAPN1P07384 TNKS1BP1-201ENST00000358252 5795 ntAPPRIS P2 TSL 1 (best) BASIC16.94■□□□□ 0.3
CAPN1P07384 FAM120AOS-201ENST00000375412 2771 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
CAPN1P07384 PTRHD1-201ENST00000328379 1105 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CAPN1P07384 SERF1B-202ENST00000380751 703 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CAPN1P07384 SMAD3-210ENST00000559092 584 ntTSL 4 BASIC16.94■□□□□ 0.3
CAPN1P07384 AC020934.1-201ENST00000588469 739 ntTSL 3 BASIC16.94■□□□□ 0.3
CAPN1P07384 MCRIP2-211ENST00000629534 341 ntTSL 2 BASIC16.94■□□□□ 0.3
CAPN1P07384 ATAD3A-207ENST00000536055 2332 ntTSL 2 BASIC16.94■□□□□ 0.3
CAPN1P07384 LDLRAP1-201ENST00000374338 2940 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CAPN1P07384 TAPBP-233ENST00000426633 1888 ntAPPRIS P4 TSL 1 (best) BASIC16.94■□□□□ 0.3
CAPN1P07384 SRSF1-201ENST00000258962 1513 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CAPN1P07384 NADK2-206ENST00000506945 1437 ntTSL 2 BASIC16.94■□□□□ 0.3
CAPN1P07384 SMARCC2-202ENST00000347471 3839 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
CAPN1P07384 FOXE1-201ENST00000375123 3462 ntAPPRIS P1 BASIC16.94■□□□□ 0.3
CAPN1P07384 RHBDF1P1-201ENST00000427504 1941 ntBASIC16.94■□□□□ 0.3
CAPN1P07384 TSPAN32-201ENST00000182290 1318 ntAPPRIS P2 TSL 1 (best) BASIC16.94■□□□□ 0.3
CAPN1P07384 TSPAN32-217ENST00000612299 1301 ntTSL 5 BASIC16.94■□□□□ 0.3
CAPN1P07384 TNRC18P3-201ENST00000441896 2691 ntBASIC16.93■□□□□ 0.3
CAPN1P07384 LHX3-203ENST00000619587 2698 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
CAPN1P07384 OR6D1P-203ENST00000641209 4860 ntBASIC16.93■□□□□ 0.3
CAPN1P07384 DPP9-AS1-201ENST00000381796 3071 ntTSL 2 BASIC16.93■□□□□ 0.3
CAPN1P07384 LZTS3-203ENST00000360342 4055 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
CAPN1P07384 LUC7L2-202ENST00000354926 2645 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CAPN1P07384 LRRTM1-202ENST00000409148 2126 ntAPPRIS P1 TSL 4 BASIC16.93■□□□□ 0.3
CAPN1P07384 EPB41L3-204ENST00000540638 3370 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
CAPN1P07384 TMEM50B-210ENST00000542230 2375 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CAPN1P07384 ANAPC11-211ENST00000575195 1361 ntAPPRIS P1 TSL 2 BASIC16.93■□□□□ 0.3
CAPN1P07384 RND2-202ENST00000587250 4147 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CAPN1P07384 RPAIN-203ENST00000381209 1535 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CAPN1P07384 FTMT-201ENST00000321339 879 ntAPPRIS P1 BASIC16.93■□□□□ 0.3
CAPN1P07384 ART5-201ENST00000359918 1241 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CAPN1P07384 FOXD3-AS1-201ENST00000418244 941 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
CAPN1P07384 CAMTA1-IT1-201ENST00000427317 365 ntTSL 3 BASIC16.93■□□□□ 0.3
CAPN1P07384 THAP5-204ENST00000438865 868 ntTSL 2 BASIC16.93■□□□□ 0.3
CAPN1P07384 ZNF436-AS1-203ENST00000454117 997 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
CAPN1P07384 GOLGA7-203ENST00000518270 808 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
CAPN1P07384 AC009533.2-201ENST00000543664 586 ntBASIC16.93■□□□□ 0.3
CAPN1P07384 ATPAF2-213ENST00000585101 566 ntTSL 4 BASIC16.93■□□□□ 0.3
CAPN1P07384 AC019129.2-201ENST00000609837 1235 ntBASIC16.93■□□□□ 0.3
CAPN1P07384 RAB11FIP5-205ENST00000486777 6120 ntTSL 5 BASIC16.93■□□□□ 0.3
CAPN1P07384 CRAMP1-201ENST00000293925 7671 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
CAPN1P07384 MFGE8-201ENST00000268150 1937 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CAPN1P07384 INTS4P1-201ENST00000438455 1935 ntBASIC16.93■□□□□ 0.3
CAPN1P07384 PPP3CA-201ENST00000323055 4519 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
CAPN1P07384 DCP1B-201ENST00000280665 2086 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CAPN1P07384 PHGDH-208ENST00000641023 2096 ntAPPRIS P1 BASIC16.93■□□□□ 0.3
CAPN1P07384 SHANK1-204ENST00000391814 6622 ntAPPRIS ALT2 TSL 5 BASIC16.93■□□□□ 0.3
CAPN1P07384 ARNTL2-208ENST00000544915 6785 ntAPPRIS ALT2 TSL 5 BASIC16.93■□□□□ 0.3
CAPN1P07384 LARP4-210ENST00000522085 1577 ntTSL 2 BASIC16.93■□□□□ 0.3
CAPN1P07384 YIPF2-204ENST00000586748 1550 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CAPN1P07384 HSD11B1L-223ENST00000616276 1580 ntAPPRIS ALT2 TSL 5 BASIC16.93■□□□□ 0.3
CAPN1P07384 MED17-201ENST00000251871 5142 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CAPN1P07384 C2orf27B-201ENST00000623129 1325 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
CAPN1P07384 ASIC3-201ENST00000297512 1718 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
CAPN1P07384 NOTCH2NL-201ENST00000362074 1874 ntAPPRIS P2 TSL 1 (best) BASIC16.93■□□□□ 0.3
CAPN1P07384 RHBDF1-201ENST00000262316 2992 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CAPN1P07384 AC008894.3-201ENST00000624324 3103 ntBASIC16.92■□□□□ 0.3
CAPN1P07384 SLC35F3-202ENST00000366618 2891 ntAPPRIS P3 TSL 2 BASIC16.92■□□□□ 0.3
CAPN1P07384 GABBR1-205ENST00000377034 4527 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CAPN1P07384 TM2D3-201ENST00000333202 1381 ntAPPRIS P4 TSL 1 (best) BASIC16.92■□□□□ 0.3
CAPN1P07384 AC005329.3-201ENST00000626781 1366 ntTSL 5 BASIC16.92■□□□□ 0.3
CAPN1P07384 LCAT-201ENST00000264005 1507 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CAPN1P07384 HASPIN-201ENST00000325418 2797 ntAPPRIS P1 BASIC16.92■□□□□ 0.3
CAPN1P07384 FAM174B-201ENST00000327355 2792 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
CAPN1P07384 ADAM22-202ENST00000398201 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
CAPN1P07384 WDR1-205ENST00000502702 1691 ntTSL 5 BASIC16.92■□□□□ 0.3
CAPN1P07384 NCOA5-201ENST00000290231 3220 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CAPN1P07384 CYTH2-204ENST00000452733 4780 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
CAPN1P07384 FOXO3-201ENST00000343882 7308 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CAPN1P07384 CRELD1-201ENST00000326434 1994 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
CAPN1P07384 TLE4-206ENST00000376552 3695 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CAPN1P07384 HBQ1-201ENST00000199708 536 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CAPN1P07384 PBK-201ENST00000301905 2118 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CAPN1P07384 MCRIP2-201ENST00000307650 946 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CAPN1P07384 RAB24-204ENST00000393611 1236 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CAPN1P07384 MCFD2-208ENST00000409973 821 ntAPPRIS P1 TSL 2 BASIC16.92■□□□□ 0.3
CAPN1P07384 TM4SF19-TCTEX1D2-201ENST00000442633 964 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CAPN1P07384 AC007834.1-201ENST00000446473 728 ntTSL 3 BASIC16.92■□□□□ 0.3
CAPN1P07384 NCBP2-AS1-201ENST00000447775 562 ntTSL 5 BASIC16.92■□□□□ 0.3
CAPN1P07384 ORAOV1-210ENST00000539414 817 ntAPPRIS ALT1 TSL 2 BASIC16.92■□□□□ 0.3
CAPN1P07384 AC109462.3-201ENST00000573934 613 ntBASIC16.92■□□□□ 0.3
CAPN1P07384 AC084125.4-201ENST00000580385 338 ntTSL 3 BASIC16.92■□□□□ 0.3
CAPN1P07384 AC005944.1-201ENST00000592758 564 ntTSL 3 BASIC16.92■□□□□ 0.3
CAPN1P07384 AC011467.2-201ENST00000598425 242 ntBASIC16.92■□□□□ 0.3
CAPN1P07384 AC002985.2-201ENST00000601106 957 ntTSL 4 BASIC16.92■□□□□ 0.3
CAPN1P07384 LDHAL6A-203ENST00000615355 1042 ntTSL 5 BASIC16.92■□□□□ 0.3
CAPN1P07384 GABRG3-206ENST00000555083 1405 ntTSL 2 BASIC16.92■□□□□ 0.3
CAPN1P07384 ASB10-202ENST00000377867 1738 ntTSL 2 BASIC16.92■□□□□ 0.3
CAPN1P07384 CFL1-203ENST00000525451 1878 ntAPPRIS P1 TSL 2 BASIC16.92■□□□□ 0.3
CAPN1P07384 ANKMY1-202ENST00000361678 2499 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 57.2 ms