Protein–RNA interactions for Protein: P02458

COL2A1, Collagen alpha-1(II) chain, humanhuman

Predicted RBP Predictions only

Length 1,487 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL2A1P02458 AC254562.3-201ENST00000626627 631 ntTSL 5 BASIC19.82■□□□□ 0.76
COL2A1P02458 PLA2G16-206ENST00000639271 957 ntTSL 5 BASIC19.82■□□□□ 0.76
COL2A1P02458 C17orf62-202ENST00000342572 1849 ntTSL 2 BASIC19.82■□□□□ 0.76
COL2A1P02458 LYSMD4-210ENST00000545021 2431 ntTSL 4 BASIC19.82■□□□□ 0.76
COL2A1P02458 ZNF398-202ENST00000475153 2860 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
COL2A1P02458 LUC7L2-210ENST00000619796 2783 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
COL2A1P02458 SCLT1-205ENST00000503401 1604 ntAPPRIS ALT2 TSL 3 BASIC19.82■□□□□ 0.76
COL2A1P02458 SETD7-204ENST00000506866 1602 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
COL2A1P02458 AC008677.1-201ENST00000519230 1561 ntBASIC19.82■□□□□ 0.76
COL2A1P02458 EVPLL-201ENST00000399134 2095 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
COL2A1P02458 AC127496.1-202ENST00000573602 2091 ntTSL 2 BASIC19.82■□□□□ 0.76
COL2A1P02458 OLFM1-201ENST00000252854 2591 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
COL2A1P02458 RHBDF1P1-201ENST00000427504 1941 ntBASIC19.82■□□□□ 0.76
COL2A1P02458 MVB12A-201ENST00000317040 2223 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
COL2A1P02458 AP1S2-201ENST00000329235 2237 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
COL2A1P02458 MBOAT1-201ENST00000324607 1794 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
COL2A1P02458 DUOXA1-202ENST00000430224 1317 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
COL2A1P02458 FBXO4-202ENST00000296812 1731 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
COL2A1P02458 CABP5-201ENST00000293255 1257 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
COL2A1P02458 MRGPRF-202ENST00000320913 705 ntTSL 2 BASIC19.81■□□□□ 0.76
COL2A1P02458 WWOX-201ENST00000355860 710 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
COL2A1P02458 TNNC2-201ENST00000372555 710 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
COL2A1P02458 TMEM91-205ENST00000436170 864 ntTSL 5 BASIC19.81■□□□□ 0.76
COL2A1P02458 AC022201.2-201ENST00000445084 287 ntTSL 5 BASIC19.81■□□□□ 0.76
COL2A1P02458 AL133467.1-201ENST00000554161 993 ntTSL 2 BASIC19.81■□□□□ 0.76
COL2A1P02458 MIR6080-201ENST00000617359 66 ntBASIC19.81■□□□□ 0.76
COL2A1P02458 MRFAP1-205ENST00000617365 2112 ntTSL 5 BASIC19.81■□□□□ 0.76
COL2A1P02458 ALDH3B1-208ENST00000617288 2078 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
COL2A1P02458 ZNF414-202ENST00000393927 2300 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
COL2A1P02458 NPM2-203ENST00000397940 1874 ntAPPRIS P2 TSL 2 BASIC19.81■□□□□ 0.76
COL2A1P02458 PCDHA1-202ENST00000394633 2204 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
COL2A1P02458 ECEL1-201ENST00000304546 2865 ntAPPRIS P3 TSL 1 (best) BASIC19.81■□□□□ 0.76
COL2A1P02458 TIA1-206ENST00000445587 1440 ntTSL 5 BASIC19.81■□□□□ 0.76
COL2A1P02458 TACR2-202ENST00000373307 1740 ntTSL 2 BASIC19.81■□□□□ 0.76
COL2A1P02458 GNG4-203ENST00000391854 5104 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
COL2A1P02458 NRG1-216ENST00000523079 2359 ntTSL 2 BASIC19.81■□□□□ 0.76
COL2A1P02458 NPBWR1-201ENST00000331251 2687 ntAPPRIS P1 BASIC19.81■□□□□ 0.76
COL2A1P02458 GFER-201ENST00000248114 2345 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
COL2A1P02458 LAT-203ENST00000395456 1616 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
COL2A1P02458 BEGAIN-211ENST00000637646 2911 ntTSL 5 BASIC19.8■□□□□ 0.76
COL2A1P02458 NOC2LP2-201ENST00000407594 1944 ntBASIC19.8■□□□□ 0.76
COL2A1P02458 ZNF664-207ENST00000539644 5108 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
COL2A1P02458 TMEM270-201ENST00000320531 854 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
COL2A1P02458 TNNT3-204ENST00000381558 1258 ntAPPRIS ALT2 TSL 5 BASIC19.8■□□□□ 0.76
COL2A1P02458 AMACR-202ENST00000382068 862 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
COL2A1P02458 AP1S3-202ENST00000396653 589 ntTSL 4 BASIC19.8■□□□□ 0.76
COL2A1P02458 LINC01812-201ENST00000457448 725 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
COL2A1P02458 RNA5SP421-201ENST00000516864 134 ntBASIC19.8■□□□□ 0.76
COL2A1P02458 AC010336.3-201ENST00000597156 667 ntTSL 2 BASIC19.8■□□□□ 0.76
COL2A1P02458 GCFC2-202ENST00000409857 2516 ntTSL 5 BASIC19.8■□□□□ 0.76
COL2A1P02458 GOLPH3-201ENST00000265070 2721 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
COL2A1P02458 DISC1-204ENST00000366633 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
COL2A1P02458 DISC1-214ENST00000539444 2658 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
COL2A1P02458 CCDC120-206ENST00000603986 2379 ntAPPRIS ALT2 TSL 2 BASIC19.8■□□□□ 0.76
COL2A1P02458 RAB3IP-207ENST00000483530 1755 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
COL2A1P02458 EZH2-201ENST00000320356 2639 ntAPPRIS P4 TSL 1 (best) BASIC19.8■□□□□ 0.76
COL2A1P02458 DPEP3-201ENST00000268793 2018 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
COL2A1P02458 LSP1-202ENST00000381775 2016 ntAPPRIS ALT2 TSL 2 BASIC19.8■□□□□ 0.76
COL2A1P02458 ZNF652-202ENST00000430262 4701 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
COL2A1P02458 IL12RB1-201ENST00000322153 1902 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
COL2A1P02458 LDOC1-201ENST00000370526 1381 ntAPPRIS P1 BASIC19.8■□□□□ 0.76
COL2A1P02458 STX6-204ENST00000542060 4809 ntTSL 2 BASIC19.8■□□□□ 0.76
COL2A1P02458 TVP23C-204ENST00000438826 1852 ntAPPRIS ALT1 TSL 1 (best) BASIC19.8■□□□□ 0.76
COL2A1P02458 CGREF1-206ENST00000405600 1346 ntAPPRIS P2 TSL 4 BASIC19.8■□□□□ 0.76
COL2A1P02458 PRMT1-202ENST00000454376 1327 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
COL2A1P02458 ITGA9-AS1-201ENST00000366441 895 ntTSL 3 BASIC19.79■□□□□ 0.76
COL2A1P02458 TMEM191A-202ENST00000419950 663 ntTSL 3 BASIC19.79■□□□□ 0.76
COL2A1P02458 RAB7A-204ENST00000483906 533 ntTSL 3 BASIC19.79■□□□□ 0.76
COL2A1P02458 AHSA2-208ENST00000489653 1197 ntAPPRIS P1 TSL 5 BASIC19.79■□□□□ 0.76
COL2A1P02458 AC011491.2-201ENST00000599584 447 ntTSL 5 BASIC19.79■□□□□ 0.76
COL2A1P02458 POLR1D-221ENST00000637180 2262 ntTSL 5 BASIC19.79■□□□□ 0.76
COL2A1P02458 GABARAPL1-201ENST00000266458 1957 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
COL2A1P02458 DNAH14-206ENST00000400952 1984 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
COL2A1P02458 ZNF256-202ENST00000598928 1958 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
COL2A1P02458 DMRTC2-204ENST00000596827 1675 ntTSL 2 BASIC19.79■□□□□ 0.76
COL2A1P02458 MTURN-201ENST00000324453 5937 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
COL2A1P02458 SPNS3-201ENST00000355530 2133 ntAPPRIS P1 TSL 2 BASIC19.79■□□□□ 0.76
COL2A1P02458 DEF8-225ENST00000569453 1852 ntAPPRIS P4 TSL 2 BASIC19.79■□□□□ 0.76
COL2A1P02458 LARGE2-206ENST00000529052 2459 ntAPPRIS ALT2 TSL 2 BASIC19.79■□□□□ 0.76
COL2A1P02458 MIB2-231ENST00000518681 3116 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
COL2A1P02458 PTK6-201ENST00000217185 2401 ntTSL 2 BASIC19.79■□□□□ 0.76
COL2A1P02458 AL109910.2-201ENST00000607733 1953 ntTSL 2 BASIC19.79■□□□□ 0.76
COL2A1P02458 KCNQ5-205ENST00000370398 6345 ntAPPRIS P3 TSL 1 (best) BASIC19.79■□□□□ 0.76
COL2A1P02458 HLA-B-249ENST00000412585 1547 ntAPPRIS P1 BASIC19.79■□□□□ 0.76
COL2A1P02458 FOXO1B-201ENST00000504678 1527 ntBASIC19.79■□□□□ 0.76
COL2A1P02458 KCNV2-201ENST00000382082 2186 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
COL2A1P02458 PARD3-208ENST00000374789 6005 ntAPPRIS P3 TSL 1 (best) BASIC19.79■□□□□ 0.76
COL2A1P02458 FARP2-202ENST00000373287 2580 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
COL2A1P02458 GBGT1-201ENST00000372036 871 ntTSL 3 BASIC19.79■□□□□ 0.76
COL2A1P02458 CACNB2-206ENST00000377328 1233 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
COL2A1P02458 ZSCAN2-205ENST00000379358 906 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
COL2A1P02458 C2orf88-205ENST00000443551 692 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
COL2A1P02458 PPP6R2P1-201ENST00000450880 1275 ntBASIC19.79■□□□□ 0.76
COL2A1P02458 AP006333.1-201ENST00000543817 575 ntTSL 4 BASIC19.79■□□□□ 0.76
COL2A1P02458 ZNF606-202ENST00000546715 636 ntTSL 4 BASIC19.79■□□□□ 0.76
COL2A1P02458 NAA60-208ENST00000570819 833 ntTSL 2 BASIC19.79■□□□□ 0.76
COL2A1P02458 GABARAP-205ENST00000573928 476 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
COL2A1P02458 CLN3-246ENST00000636228 1224 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
COL2A1P02458 PRRT4-205ENST00000489835 2313 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
COL2A1P02458 AFF2-204ENST00000370458 1488 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 153.2 ms