Protein–RNA interactions for Protein: P02452

COL1A1, Collagen alpha-1(I) chain, humanhuman

Predicted RBP Predictions only

Length 1,464 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1P02452 CGB2-201ENST00000359342 627 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
COL1A1P02452 MRPL9-202ENST00000368830 1296 ntAPPRIS P3 TSL 1 (best) BASIC20.47■□□□□ 0.87
COL1A1P02452 MECP2-203ENST00000407218 1174 ntTSL 5 BASIC20.47■□□□□ 0.87
COL1A1P02452 LINC00404-201ENST00000418660 428 ntTSL 2 BASIC20.47■□□□□ 0.87
COL1A1P02452 GPS2P2-201ENST00000430745 888 ntBASIC20.47■□□□□ 0.87
COL1A1P02452 AC079140.1-201ENST00000508039 487 ntBASIC20.47■□□□□ 0.87
COL1A1P02452 AC109635.5-201ENST00000533593 962 ntBASIC20.47■□□□□ 0.87
COL1A1P02452 AC243562.1-201ENST00000560672 389 ntBASIC20.47■□□□□ 0.87
COL1A1P02452 MIR4745-201ENST00000577608 62 ntBASIC20.47■□□□□ 0.87
COL1A1P02452 AL031055.1-201ENST00000606362 631 ntBASIC20.47■□□□□ 0.87
COL1A1P02452 AC004832.1-201ENST00000610936 1005 ntTSL 5 BASIC20.47■□□□□ 0.87
COL1A1P02452 CDIP1-207ENST00000564828 1636 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
COL1A1P02452 PPFIA1-202ENST00000389547 4133 ntAPPRIS ALT1 TSL 1 (best) BASIC20.47■□□□□ 0.87
COL1A1P02452 RAPH1-211ENST00000457812 2673 ntAPPRIS ALT2 TSL 2 BASIC20.47■□□□□ 0.87
COL1A1P02452 KCNK7-203ENST00000394216 1563 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
COL1A1P02452 NUTM2D-201ENST00000381697 3290 ntAPPRIS P5 TSL 1 (best) BASIC20.47■□□□□ 0.87
COL1A1P02452 MFSD2B-202ENST00000406420 1528 ntAPPRIS P2 TSL 5 BASIC20.47■□□□□ 0.87
COL1A1P02452 PCGF2-206ENST00000618941 1499 ntTSL 5 BASIC20.47■□□□□ 0.87
COL1A1P02452 LUC7L2-202ENST00000354926 2645 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
COL1A1P02452 MAP4K1-203ENST00000586296 1363 ntTSL 5 BASIC20.46■□□□□ 0.87
COL1A1P02452 YAP1-211ENST00000629586 1365 ntTSL 5 BASIC20.46■□□□□ 0.87
COL1A1P02452 CPXM2-204ENST00000615851 2512 ntTSL 5 BASIC20.46■□□□□ 0.87
COL1A1P02452 HFE2-201ENST00000336751 2234 ntAPPRIS P1 TSL 2 BASIC20.46■□□□□ 0.87
COL1A1P02452 SLC39A1-210ENST00000617697 2214 ntAPPRIS P1 TSL 5 BASIC20.46■□□□□ 0.87
COL1A1P02452 NCOA6-207ENST00000616167 3271 ntAPPRIS ALT2 TSL 5 BASIC20.46■□□□□ 0.87
COL1A1P02452 RPS27A-201ENST00000272317 1071 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
COL1A1P02452 IFT20-202ENST00000357896 974 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
COL1A1P02452 S100A14-204ENST00000368702 1218 ntAPPRIS P1 TSL 3 BASIC20.46■□□□□ 0.87
COL1A1P02452 AL022068.1-202ENST00000432171 794 ntTSL 3 BASIC20.46■□□□□ 0.87
COL1A1P02452 WBP2-203ENST00000433525 928 ntTSL 2 BASIC20.46■□□□□ 0.87
COL1A1P02452 S100A14-206ENST00000476873 1025 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
COL1A1P02452 LINC02242-201ENST00000507298 641 ntTSL 5 BASIC20.46■□□□□ 0.87
COL1A1P02452 KRT16P2-202ENST00000579062 563 ntTSL 4 BASIC20.46■□□□□ 0.87
COL1A1P02452 INO80C-206ENST00000586489 594 ntTSL 3 BASIC20.46■□□□□ 0.87
COL1A1P02452 AC005759.1-201ENST00000594805 855 ntTSL 3 BASIC20.46■□□□□ 0.87
COL1A1P02452 ZCWPW1-202ENST00000398027 2356 ntAPPRIS P3 TSL 1 (best) BASIC20.46■□□□□ 0.87
COL1A1P02452 GDA-201ENST00000238018 2074 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
COL1A1P02452 NFE2-202ENST00000435572 1762 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
COL1A1P02452 CAMKV-204ENST00000466940 1475 ntTSL 2 BASIC20.46■□□□□ 0.87
COL1A1P02452 SIL1-213ENST00000509534 1714 ntTSL 5 BASIC20.46■□□□□ 0.87
COL1A1P02452 LINC02012-201ENST00000608206 1725 ntBASIC20.46■□□□□ 0.87
COL1A1P02452 ELP5-201ENST00000354429 1304 ntAPPRIS P2 TSL 5 BASIC20.45■□□□□ 0.86
COL1A1P02452 TIMM50-220ENST00000607714 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
COL1A1P02452 TTLL8-201ENST00000266182 2505 ntAPPRIS ALT2 TSL 5 BASIC20.45■□□□□ 0.86
COL1A1P02452 PGR-201ENST00000263463 2496 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
COL1A1P02452 WDR45-234ENST00000634838 1545 ntTSL 5 BASIC20.45■□□□□ 0.86
COL1A1P02452 BLZF1-202ENST00000367807 1295 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
COL1A1P02452 HLA-DRB6-201ENST00000411500 1235 ntBASIC20.45■□□□□ 0.86
COL1A1P02452 HCG4-201ENST00000418983 998 ntBASIC20.45■□□□□ 0.86
COL1A1P02452 FOLR3-201ENST00000442948 805 ntTSL 5 BASIC20.45■□□□□ 0.86
COL1A1P02452 SPDYE11-202ENST00000450699 704 ntBASIC20.45■□□□□ 0.86
COL1A1P02452 FAM72B-205ENST00000471903 676 ntTSL 5 BASIC20.45■□□□□ 0.86
COL1A1P02452 VASH2-211ENST00000517399 1068 ntAPPRIS ALT1 TSL 1 (best) BASIC20.45■□□□□ 0.86
COL1A1P02452 AC087276.3-201ENST00000526220 787 ntTSL 3 BASIC20.45■□□□□ 0.86
COL1A1P02452 AC087386.1-201ENST00000553658 572 ntTSL 4 BASIC20.45■□□□□ 0.86
COL1A1P02452 AC090515.4-201ENST00000558042 450 ntTSL 3 BASIC20.45■□□□□ 0.86
COL1A1P02452 AC051619.7-201ENST00000568314 623 ntBASIC20.45■□□□□ 0.86
COL1A1P02452 SPDYE9P-201ENST00000570642 692 ntBASIC20.45■□□□□ 0.86
COL1A1P02452 AC138761.1-201ENST00000584393 385 ntBASIC20.45■□□□□ 0.86
COL1A1P02452 SPDYE10P-202ENST00000612005 668 ntBASIC20.45■□□□□ 0.86
COL1A1P02452 SPDYE8P-202ENST00000612377 668 ntBASIC20.45■□□□□ 0.86
COL1A1P02452 MAPK9-203ENST00000393360 4326 ntTSL 5 BASIC20.45■□□□□ 0.86
COL1A1P02452 NAP1L5-201ENST00000323061 2321 ntAPPRIS P1 BASIC20.45■□□□□ 0.86
COL1A1P02452 ATP6V1E1-201ENST00000253413 1402 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
COL1A1P02452 CHRD-202ENST00000348986 3155 ntAPPRIS ALT2 TSL 5 BASIC20.45■□□□□ 0.86
COL1A1P02452 DUS3L-202ENST00000320699 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
COL1A1P02452 ANHX-202ENST00000545940 3452 ntAPPRIS P1 TSL 5 BASIC20.45■□□□□ 0.86
COL1A1P02452 LINC00957-202ENST00000441052 2590 ntTSL 2 BASIC20.45■□□□□ 0.86
COL1A1P02452 PHF2-201ENST00000359246 5569 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
COL1A1P02452 LMNA-205ENST00000368299 2253 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
COL1A1P02452 ABHD14B-206ENST00000483233 2056 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
COL1A1P02452 NUDT4P1-201ENST00000322209 1206 ntAPPRIS P1 BASIC20.44■□□□□ 0.86
COL1A1P02452 SNHG11-201ENST00000359074 1031 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
COL1A1P02452 AL137003.1-201ENST00000423260 491 ntTSL 5 BASIC20.44■□□□□ 0.86
COL1A1P02452 FAM58DP-201ENST00000428076 619 ntBASIC20.44■□□□□ 0.86
COL1A1P02452 MTRF1LP2-201ENST00000506027 1122 ntBASIC20.44■□□□□ 0.86
COL1A1P02452 RNA5SP421-201ENST00000516864 134 ntBASIC20.44■□□□□ 0.86
COL1A1P02452 AP000275.2-202ENST00000553001 929 ntTSL 5 BASIC20.44■□□□□ 0.86
COL1A1P02452 DUT-210ENST00000559935 569 ntTSL 3 BASIC20.44■□□□□ 0.86
COL1A1P02452 MTX1-207ENST00000609421 1085 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
COL1A1P02452 WNT1-202ENST00000613114 1278 ntTSL 5 BASIC20.44■□□□□ 0.86
COL1A1P02452 AC244153.1-203ENST00000622796 419 ntTSL 2 BASIC20.44■□□□□ 0.86
COL1A1P02452 EIF4E1B-201ENST00000318682 1974 ntAPPRIS P1 TSL 5 BASIC20.44■□□□□ 0.86
COL1A1P02452 STAMBPL1-203ENST00000371926 2532 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
COL1A1P02452 TRIM7-204ENST00000393319 2320 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
COL1A1P02452 COQ6-201ENST00000334571 2118 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
COL1A1P02452 PIP5K1A-207ENST00000441902 2297 ntTSL 2 BASIC20.44■□□□□ 0.86
COL1A1P02452 BAZ1A-202ENST00000360310 6010 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
COL1A1P02452 MCM9-201ENST00000316068 2442 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
COL1A1P02452 ZNF500-202ENST00000545009 2440 ntTSL 2 BASIC20.44■□□□□ 0.86
COL1A1P02452 ZNF22-201ENST00000298299 2551 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
COL1A1P02452 NGLY1-207ENST00000428257 2534 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
COL1A1P02452 BSG-202ENST00000346916 1605 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
COL1A1P02452 BSG-203ENST00000353555 1616 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
COL1A1P02452 LINC00895-201ENST00000629028 1637 ntBASIC20.44■□□□□ 0.86
COL1A1P02452 IFNL1-201ENST00000333625 857 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
COL1A1P02452 HSD17B10-203ENST00000375304 916 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
COL1A1P02452 CLDN15-202ENST00000401528 2131 ntAPPRIS P1 TSL 2 BASIC20.43■□□□□ 0.86
COL1A1P02452 TFAMP1-201ENST00000412727 736 ntBASIC20.43■□□□□ 0.86
COL1A1P02452 KRT18P32-201ENST00000424695 1287 ntBASIC20.43■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 29.1 ms