Protein–RNA interactions for Protein: P01906

HLA-DQA2, HLA class II histocompatibility antigen, DQ alpha 2 chain, humanhuman

Predictions only

Length 255 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQA2P01906 FGFR2-215ENST00000457416 3061 ntAPPRIS P3 TSL 1 (best) BASIC15.46■□□□□ 0.07
HLA-DQA2P01906 ANOS1-201ENST00000262648 6314 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
HLA-DQA2P01906 IL2RG-202ENST00000374188 1432 ntTSL 5 BASIC15.46■□□□□ 0.07
HLA-DQA2P01906 LRRC56-201ENST00000270115 2769 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
HLA-DQA2P01906 PHLDB1-223ENST00000600882 5479 ntAPPRIS P3 TSL 1 (best) BASIC15.46■□□□□ 0.07
HLA-DQA2P01906 SUSD4-208ENST00000494793 1833 ntTSL 5 BASIC15.46■□□□□ 0.07
HLA-DQA2P01906 KLK12-201ENST00000250351 882 ntAPPRIS P4 TSL 5 BASIC15.46■□□□□ 0.07
HLA-DQA2P01906 KLK12-202ENST00000319590 1074 ntAPPRIS ALT2 TSL 5 BASIC15.46■□□□□ 0.07
HLA-DQA2P01906 HEBP2-201ENST00000367697 844 ntTSL 2 BASIC15.46■□□□□ 0.07
HLA-DQA2P01906 MADCAM1-203ENST00000382683 603 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
HLA-DQA2P01906 RPS9-203ENST00000391752 772 ntAPPRIS P1 TSL 2 BASIC15.46■□□□□ 0.07
HLA-DQA2P01906 SEMA4B-202ENST00000411539 3807 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
HLA-DQA2P01906 AC093734.1-201ENST00000416100 242 ntTSL 3 BASIC15.46■□□□□ 0.07
HLA-DQA2P01906 HDAC11-AS1-201ENST00000424112 515 ntTSL 2 BASIC15.46■□□□□ 0.07
HLA-DQA2P01906 ZNF436-AS1-203ENST00000454117 997 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
HLA-DQA2P01906 AC019129.2-201ENST00000609837 1235 ntBASIC15.46■□□□□ 0.07
HLA-DQA2P01906 LRRC61-201ENST00000323078 1684 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
HLA-DQA2P01906 TAPBP-238ENST00000475304 1686 ntAPPRIS ALT2 TSL 5 BASIC15.46■□□□□ 0.07
HLA-DQA2P01906 MIER1-204ENST00000371012 2420 ntTSL 2 BASIC15.46■□□□□ 0.07
HLA-DQA2P01906 SPRYD7-202ENST00000378195 3086 ntTSL 2 BASIC15.46■□□□□ 0.07
HLA-DQA2P01906 DYDC2-202ENST00000372197 2022 ntAPPRIS P3 TSL 1 (best) BASIC15.46■□□□□ 0.07
HLA-DQA2P01906 NRN1-201ENST00000244766 1624 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
HLA-DQA2P01906 LDLRAP1-201ENST00000374338 2940 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
HLA-DQA2P01906 ACAP1-201ENST00000158762 2512 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
HLA-DQA2P01906 PDX1-201ENST00000381033 2501 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
HLA-DQA2P01906 EIF4G1-209ENST00000414031 5569 ntTSL 1 (best) BASIC15.46■□□□□ 0.06
HLA-DQA2P01906 CRELD1-201ENST00000326434 1994 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
HLA-DQA2P01906 WDR88-202ENST00000361680 1835 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
HLA-DQA2P01906 NFATC4-204ENST00000424781 5488 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
HLA-DQA2P01906 ABHD3-209ENST00000580981 1836 ntTSL 5 BASIC15.45■□□□□ 0.06
HLA-DQA2P01906 RABGGTA-201ENST00000216840 2088 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
HLA-DQA2P01906 LRRC47-201ENST00000378251 4310 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
HLA-DQA2P01906 PYCR3-201ENST00000220966 2678 ntAPPRIS P2 TSL 1 (best) BASIC15.45■□□□□ 0.06
HLA-DQA2P01906 MGAT2-201ENST00000305386 2687 ntAPPRIS P1 BASIC15.45■□□□□ 0.06
HLA-DQA2P01906 KCNV2-201ENST00000382082 2186 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
HLA-DQA2P01906 ARHGEF4-206ENST00000428230 2172 ntTSL 5 BASIC15.45■□□□□ 0.06
HLA-DQA2P01906 MRPS30-202ENST00000507110 1678 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
HLA-DQA2P01906 NRXN2-202ENST00000301894 3535 ntTSL 5 BASIC15.45■□□□□ 0.06
HLA-DQA2P01906 DOK4-201ENST00000340099 2772 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
HLA-DQA2P01906 GLUL-201ENST00000311223 4719 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
HLA-DQA2P01906 SELENBP1-201ENST00000368868 1752 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
HLA-DQA2P01906 LSP1-203ENST00000405957 1785 ntAPPRIS ALT2 TSL 5 BASIC15.45■□□□□ 0.06
HLA-DQA2P01906 USF2-202ENST00000343550 1523 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
HLA-DQA2P01906 GUK1-204ENST00000366721 689 ntTSL 3 BASIC15.45■□□□□ 0.06
HLA-DQA2P01906 LINC01128-207ENST00000449005 874 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
HLA-DQA2P01906 NOL7-202ENST00000451315 1184 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
HLA-DQA2P01906 AC122714.2-201ENST00000502787 707 ntBASIC15.45■□□□□ 0.06
HLA-DQA2P01906 CCDC61-201ENST00000536603 1282 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
HLA-DQA2P01906 RDH5-202ENST00000547072 1054 ntTSL 5 BASIC15.45■□□□□ 0.06
HLA-DQA2P01906 C17orf49-208ENST00000552402 760 ntTSL 2 BASIC15.45■□□□□ 0.06
HLA-DQA2P01906 AL161669.1-201ENST00000559843 386 ntTSL 3 BASIC15.45■□□□□ 0.06
HLA-DQA2P01906 ATP6V0C-202ENST00000564973 1081 ntTSL 2 BASIC15.45■□□□□ 0.06
HLA-DQA2P01906 AL049597.2-201ENST00000565575 961 ntBASIC15.45■□□□□ 0.06
HLA-DQA2P01906 AC087645.2-201ENST00000586321 799 ntTSL 3 BASIC15.45■□□□□ 0.06
HLA-DQA2P01906 AL138831.2-201ENST00000606564 490 ntBASIC15.45■□□□□ 0.06
HLA-DQA2P01906 AL121672.3-201ENST00000608644 468 ntBASIC15.45■□□□□ 0.06
HLA-DQA2P01906 C1QTNF8-202ENST00000621771 897 ntTSL 5 BASIC15.45■□□□□ 0.06
HLA-DQA2P01906 RIMS1-213ENST00000517960 4428 ntTSL 5 BASIC15.45■□□□□ 0.06
HLA-DQA2P01906 RIMS1-215ENST00000520567 4442 ntTSL 5 BASIC15.45■□□□□ 0.06
HLA-DQA2P01906 BAP1-202ENST00000460680 3937 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
HLA-DQA2P01906 ZDHHC9-202ENST00000371064 2473 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
HLA-DQA2P01906 ASIC3-203ENST00000357922 2232 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
HLA-DQA2P01906 ELAVL3-201ENST00000359227 4729 ntAPPRIS P3 TSL 3 BASIC15.45■□□□□ 0.06
HLA-DQA2P01906 ESYT3-201ENST00000289135 1356 ntTSL 5 BASIC15.45■□□□□ 0.06
HLA-DQA2P01906 AC011840.1-202ENST00000436477 1351 ntTSL 2 BASIC15.45■□□□□ 0.06
HLA-DQA2P01906 IGFBP3-203ENST00000381086 2322 ntTSL 2 BASIC15.45■□□□□ 0.06
HLA-DQA2P01906 ME2-201ENST00000321341 9415 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
HLA-DQA2P01906 FAM160B1-202ENST00000369248 5810 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
HLA-DQA2P01906 KCNQ2-215ENST00000629241 2853 ntTSL 5 BASIC15.45■□□□□ 0.06
HLA-DQA2P01906 UHMK1-202ENST00000489294 8478 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
HLA-DQA2P01906 CCT6P1-202ENST00000442266 1317 ntTSL 2 BASIC15.44■□□□□ 0.06
HLA-DQA2P01906 ZNF302-201ENST00000423823 2590 ntAPPRIS P3 TSL 1 (best) BASIC15.44■□□□□ 0.06
HLA-DQA2P01906 EPN2-203ENST00000395618 2216 ntTSL 2 BASIC15.44■□□□□ 0.06
HLA-DQA2P01906 TMEM106C-203ENST00000449758 1414 ntTSL 2 BASIC15.44■□□□□ 0.06
HLA-DQA2P01906 PTHLH-205ENST00000535992 1891 ntAPPRIS P3 TSL 1 (best) BASIC15.44■□□□□ 0.06
HLA-DQA2P01906 SATB2-205ENST00000443023 6194 ntTSL 5 BASIC15.44■□□□□ 0.06
HLA-DQA2P01906 MYOG-201ENST00000241651 1528 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
HLA-DQA2P01906 SLC35G1-202ENST00000427197 2402 ntAPPRIS ALT2 TSL 1 (best) BASIC15.44■□□□□ 0.06
HLA-DQA2P01906 ELAVL2-208ENST00000544538 3789 ntAPPRIS P3 TSL 5 BASIC15.44■□□□□ 0.06
HLA-DQA2P01906 PHF8-203ENST00000338946 4651 ntAPPRIS ALT2 TSL 2 BASIC15.44■□□□□ 0.06
HLA-DQA2P01906 AC011473.4-202ENST00000250366 1602 ntAPPRIS P5 TSL 2 BASIC15.44■□□□□ 0.06
HLA-DQA2P01906 MREG-205ENST00000620139 2618 ntAPPRIS P1 TSL 2 BASIC15.44■□□□□ 0.06
HLA-DQA2P01906 FBXO18-203ENST00000397269 3640 ntTSL 5 BASIC15.44■□□□□ 0.06
HLA-DQA2P01906 PWP1-202ENST00000541166 1722 ntTSL 2 BASIC15.44■□□□□ 0.06
HLA-DQA2P01906 LINC02012-201ENST00000608206 1725 ntBASIC15.44■□□□□ 0.06
HLA-DQA2P01906 PSMG3-AS1-201ENST00000437621 5701 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
HLA-DQA2P01906 AURKAIP1-202ENST00000338338 1047 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
HLA-DQA2P01906 MLLT10-205ENST00000377100 1136 ntTSL 2 BASIC15.44■□□□□ 0.06
HLA-DQA2P01906 MRPL23-201ENST00000381514 919 ntTSL 3 BASIC15.44■□□□□ 0.06
HLA-DQA2P01906 CLDN7-202ENST00000397317 1228 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
HLA-DQA2P01906 AL513320.1-201ENST00000435049 622 ntTSL 3 BASIC15.44■□□□□ 0.06
HLA-DQA2P01906 DYDC2-206ENST00000444807 1173 ntAPPRIS P3 TSL 3 BASIC15.44■□□□□ 0.06
HLA-DQA2P01906 PACRGL-218ENST00000507634 1142 ntTSL 5 BASIC15.44■□□□□ 0.06
HLA-DQA2P01906 AC004801.5-202ENST00000546804 530 ntTSL 4 BASIC15.44■□□□□ 0.06
HLA-DQA2P01906 AC005336.2-201ENST00000593183 939 ntBASIC15.44■□□□□ 0.06
HLA-DQA2P01906 RAB34-226ENST00000636772 1180 ntTSL 5 BASIC15.44■□□□□ 0.06
HLA-DQA2P01906 SLC52A1-201ENST00000254853 2377 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
HLA-DQA2P01906 RBFADN-201ENST00000562391 1350 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
HLA-DQA2P01906 TSHZ1-204ENST00000580243 3582 ntAPPRIS P1 TSL 2 BASIC15.44■□□□□ 0.06
HLA-DQA2P01906 C9orf43-202ENST00000374165 2049 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Retrieved 100 of 98,524 protein–RNA pairs in 48.3 ms