Protein–RNA interactions for Protein: O95243

MBD4, Methyl-CpG-binding domain protein 4, humanhuman

Predictions only

Length 580 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MBD4O95243 GPR149-201ENST00000389740 2323 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
MBD4O95243 IQSEC2-218ENST00000640694 5958 ntAPPRIS ALT2 TSL 5 BASIC20.41■□□□□ 0.86
MBD4O95243 B4GALT4-216ENST00000483209 2494 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
MBD4O95243 CCDC107-201ENST00000327351 804 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
MBD4O95243 ROMO1-201ENST00000336695 496 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
MBD4O95243 PMP22-202ENST00000395936 816 ntTSL 3 BASIC20.41■□□□□ 0.86
MBD4O95243 PRR29-203ENST00000425164 1266 ntTSL 2 BASIC20.41■□□□□ 0.86
MBD4O95243 AC004832.2-201ENST00000426397 482 ntBASIC20.41■□□□□ 0.86
MBD4O95243 AL049612.1-201ENST00000427017 694 ntTSL 5 BASIC20.41■□□□□ 0.86
MBD4O95243 LINC01503-203ENST00000436710 901 ntTSL 3 BASIC20.41■□□□□ 0.86
MBD4O95243 IL18BP-211ENST00000531053 853 ntAPPRIS ALT2 TSL 2 BASIC20.41■□□□□ 0.86
MBD4O95243 AP000763.4-201ENST00000544674 752 ntTSL 5 BASIC20.41■□□□□ 0.86
MBD4O95243 AC023355.1-201ENST00000560323 752 ntTSL 3 BASIC20.41■□□□□ 0.86
MBD4O95243 ZNF445-205ENST00000617032 1291 ntTSL 5 BASIC20.41■□□□□ 0.86
MBD4O95243 BCAR1-209ENST00000546196 1340 ntBASIC20.41■□□□□ 0.86
MBD4O95243 FNBP1-202ENST00000420781 5410 ntAPPRIS ALT1 TSL 1 (best) BASIC20.41■□□□□ 0.86
MBD4O95243 FENDRR-206ENST00000599749 2843 ntTSL 3 BASIC20.41■□□□□ 0.86
MBD4O95243 PRRT2-205ENST00000567659 1470 ntTSL 2 BASIC20.41■□□□□ 0.86
MBD4O95243 EVA1C-202ENST00000382699 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC20.41■□□□□ 0.86
MBD4O95243 BFSP1-201ENST00000377868 2063 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
MBD4O95243 ALDH3B1-208ENST00000617288 2078 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
MBD4O95243 HDAC10-222ENST00000626012 2607 ntTSL 5 BASIC20.4■□□□□ 0.86
MBD4O95243 TAP1-201ENST00000354258 2959 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
MBD4O95243 CGREF1-201ENST00000260595 1177 ntAPPRIS ALT2 TSL 5 BASIC20.4■□□□□ 0.86
MBD4O95243 THAP3-202ENST00000307896 1046 ntAPPRIS ALT2 TSL 2 BASIC20.4■□□□□ 0.86
MBD4O95243 CYP2W1-201ENST00000308919 2304 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
MBD4O95243 COL18A1-202ENST00000355480 5924 ntAPPRIS P3 TSL 1 (best) BASIC20.4■□□□□ 0.86
MBD4O95243 CKLF-204ENST00000362093 412 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
MBD4O95243 PAXX-201ENST00000371620 812 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
MBD4O95243 MFSD2A-202ENST00000372811 2154 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
MBD4O95243 TMEM155-202ENST00000394394 1753 ntAPPRIS P2 TSL 3 BASIC20.4■□□□□ 0.86
MBD4O95243 NR4A2-203ENST00000409108 1735 ntTSL 5 BASIC20.4■□□□□ 0.86
MBD4O95243 ADM5-201ENST00000420022 1718 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
MBD4O95243 SNHG11-205ENST00000421599 1046 ntTSL 3 BASIC20.4■□□□□ 0.86
MBD4O95243 FAM131A-207ENST00000450976 1335 ntTSL 3 BASIC20.4■□□□□ 0.86
MBD4O95243 RNASEK-203ENST00000549393 783 ntTSL 3 BASIC20.4■□□□□ 0.86
MBD4O95243 KRT19P2-202ENST00000557173 1012 ntBASIC20.4■□□□□ 0.86
MBD4O95243 LINC01148-201ENST00000557527 1763 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
MBD4O95243 HAGH-208ENST00000566709 1291 ntTSL 5 BASIC20.4■□□□□ 0.86
MBD4O95243 COX5A-206ENST00000568783 571 ntTSL 3 BASIC20.4■□□□□ 0.86
MBD4O95243 LINC01128-210ENST00000609139 455 ntTSL 3 BASIC20.4■□□□□ 0.86
MBD4O95243 AC129492.6-201ENST00000611383 1305 ntBASIC20.4■□□□□ 0.86
MBD4O95243 ENC1-201ENST00000302351 5520 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
MBD4O95243 SEPT11-201ENST00000264893 5593 ntAPPRIS P2 TSL 1 (best) BASIC20.4■□□□□ 0.86
MBD4O95243 P2RY6-202ENST00000393590 2398 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
MBD4O95243 PPIF-201ENST00000225174 2190 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
MBD4O95243 LSP1-202ENST00000381775 2016 ntAPPRIS ALT2 TSL 2 BASIC20.39■□□□□ 0.86
MBD4O95243 RUSC1-209ENST00000471876 1749 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
MBD4O95243 SEPT4-201ENST00000317256 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.85
MBD4O95243 KIF25-202ENST00000354419 1510 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
MBD4O95243 TPT1-AS1-215ENST00000522673 1519 ntTSL 5 BASIC20.39■□□□□ 0.85
MBD4O95243 KCNQ2-215ENST00000629241 2853 ntTSL 5 BASIC20.39■□□□□ 0.85
MBD4O95243 AC025580.3-201ENST00000617932 1424 ntBASIC20.39■□□□□ 0.85
MBD4O95243 VPS13B-201ENST00000355155 2822 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
MBD4O95243 ICAM2-202ENST00000418105 1252 ntAPPRIS P1 TSL 3 BASIC20.39■□□□□ 0.85
MBD4O95243 SLC26A4-AS1-202ENST00000449741 586 ntTSL 4 BASIC20.39■□□□□ 0.85
MBD4O95243 DUSP6-204ENST00000547291 1074 ntTSL 2 BASIC20.39■□□□□ 0.85
MBD4O95243 FAM181A-205ENST00000557719 1072 ntAPPRIS P1 TSL 2 BASIC20.39■□□□□ 0.85
MBD4O95243 AC126696.3-201ENST00000563993 575 ntTSL 4 BASIC20.39■□□□□ 0.85
MBD4O95243 ICAM2-208ENST00000579788 1103 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
MBD4O95243 H3F3B-208ENST00000589599 576 ntAPPRIS P1 TSL 3 BASIC20.39■□□□□ 0.85
MBD4O95243 AC010327.4-202ENST00000591484 748 ntBASIC20.39■□□□□ 0.85
MBD4O95243 PGPEP1-209ENST00000604499 769 ntTSL 5 BASIC20.39■□□□□ 0.85
MBD4O95243 TMEM45B-201ENST00000281441 2234 ntAPPRIS P1 TSL 2 BASIC20.39■□□□□ 0.85
MBD4O95243 DDX28-201ENST00000332395 2169 ntAPPRIS P1 BASIC20.39■□□□□ 0.85
MBD4O95243 RABGGTA-201ENST00000216840 2088 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
MBD4O95243 F12-201ENST00000253496 2049 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
MBD4O95243 DVL2-201ENST00000005340 3018 ntAPPRIS P2 TSL 1 (best) BASIC20.39■□□□□ 0.85
MBD4O95243 EIF5-201ENST00000216554 5945 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
MBD4O95243 CXorf67-201ENST00000342995 1929 ntAPPRIS P1 BASIC20.39■□□□□ 0.85
MBD4O95243 RABEP2-202ENST00000358201 2821 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
MBD4O95243 C17orf62-202ENST00000342572 1849 ntTSL 2 BASIC20.39■□□□□ 0.85
MBD4O95243 TPM1-205ENST00000357980 1800 ntTSL 2 BASIC20.39■□□□□ 0.85
MBD4O95243 WDR53-201ENST00000332629 1679 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
MBD4O95243 ARL13B-203ENST00000394222 2453 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
MBD4O95243 PRKN-202ENST00000366892 1505 ntTSL 5 BASIC20.38■□□□□ 0.85
MBD4O95243 AC108860.2-201ENST00000562760 2183 ntBASIC20.38■□□□□ 0.85
MBD4O95243 ILVBL-209ENST00000534378 2067 ntTSL 5 BASIC20.38■□□□□ 0.85
MBD4O95243 SARDH-202ENST00000371867 1326 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
MBD4O95243 SLC3A2-201ENST00000338663 1904 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
MBD4O95243 RHOBTB1-201ENST00000337910 4473 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
MBD4O95243 KRTCAP2-201ENST00000295682 552 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
MBD4O95243 GRHPR-201ENST00000318158 1280 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
MBD4O95243 SMN1-201ENST00000351205 900 ntAPPRIS P3 TSL 1 (best) BASIC20.38■□□□□ 0.85
MBD4O95243 DNAJC4-203ENST00000355040 759 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
MBD4O95243 SMN2-201ENST00000380741 900 ntAPPRIS P4 TSL 1 (best) BASIC20.38■□□□□ 0.85
MBD4O95243 SH3TC1-202ENST00000382521 829 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
MBD4O95243 SCRN1-203ENST00000409570 535 ntTSL 4 BASIC20.38■□□□□ 0.85
MBD4O95243 BX276092.7-202ENST00000422194 696 ntTSL 3 BASIC20.38■□□□□ 0.85
MBD4O95243 AL365226.1-201ENST00000448363 349 ntTSL 2 BASIC20.38■□□□□ 0.85
MBD4O95243 DDIT4-AS1-201ENST00000491934 847 ntTSL 5 BASIC20.38■□□□□ 0.85
MBD4O95243 AP000892.1-201ENST00000504906 488 ntTSL 3 BASIC20.38■□□□□ 0.85
MBD4O95243 BLOC1S1-201ENST00000547076 837 ntTSL 2 BASIC20.38■□□□□ 0.85
MBD4O95243 AP005233.2-201ENST00000561588 372 ntTSL 3 BASIC20.38■□□□□ 0.85
MBD4O95243 SPATA33-208ENST00000568929 1264 ntAPPRIS ALT2 TSL 2 BASIC20.38■□□□□ 0.85
MBD4O95243 TWSG1-202ENST00000581641 1119 ntTSL 2 BASIC20.38■□□□□ 0.85
MBD4O95243 ARHGDIA-208ENST00000581876 709 ntTSL 3 BASIC20.38■□□□□ 0.85
MBD4O95243 AC002398.2-201ENST00000587767 660 ntTSL 5 BASIC20.38■□□□□ 0.85
MBD4O95243 OR5AH1P-202ENST00000597822 431 ntTSL 3 BASIC20.38■□□□□ 0.85
MBD4O95243 SMN2-216ENST00000638794 846 ntAPPRIS ALT2 TSL 5 BASIC20.38■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 55.7 ms