Protein–RNA interactions for Protein: O60759

CYTIP, Cytohesin-interacting protein, humanhuman

Predictions only

Length 359 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CYTIPO60759 RPS15P9-201ENST00000494093 319 ntBASIC15.33■□□□□ 0.04
CYTIPO60759 IGHV3-22-201ENST00000520721 359 ntBASIC15.33■□□□□ 0.04
CYTIPO60759 FGFR1OP2-206ENST00000546072 956 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
CYTIPO60759 TUBB3-205ENST00000554336 903 ntTSL 3 BASIC15.33■□□□□ 0.04
CYTIPO60759 HOXA11-AS1_5.1-201ENST00000620211 203 ntBASIC15.33■□□□□ 0.04
CYTIPO60759 AC117500.6-201ENST00000624871 588 ntBASIC15.33■□□□□ 0.04
CYTIPO60759 IL9RP2-201ENST00000423948 1312 ntBASIC15.33■□□□□ 0.04
CYTIPO60759 CLN6-202ENST00000538696 1343 ntTSL 2 BASIC15.33■□□□□ 0.04
CYTIPO60759 BICD1-205ENST00000550207 1328 ntTSL 3 BASIC15.33■□□□□ 0.04
CYTIPO60759 C8orf34-206ENST00000518698 2223 ntAPPRIS P2 TSL 2 BASIC15.33■□□□□ 0.04
CYTIPO60759 TNRC18P3-201ENST00000441896 2691 ntBASIC15.33■□□□□ 0.04
CYTIPO60759 BACE1-201ENST00000313005 6326 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
CYTIPO60759 CAP2-202ENST00000378990 1812 ntTSL 2 BASIC15.33■□□□□ 0.04
CYTIPO60759 CD99P1-204ENST00000435581 2788 ntTSL 2 BASIC15.33■□□□□ 0.04
CYTIPO60759 REEP4-202ENST00000334530 1476 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
CYTIPO60759 LINC00671-201ENST00000301683 1958 ntTSL 2 BASIC15.33■□□□□ 0.04
CYTIPO60759 CCM2-207ENST00000475551 2471 ntAPPRIS ALT2 TSL 2 BASIC15.33■□□□□ 0.04
CYTIPO60759 HNRNPM-217ENST00000620401 2458 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
CYTIPO60759 WIPI2-201ENST00000288828 4476 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
CYTIPO60759 GOLGA2P9-203ENST00000600260 2033 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
CYTIPO60759 CREBBP-201ENST00000262367 10803 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CYTIPO60759 ZBTB4-202ENST00000380599 5866 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CYTIPO60759 SLX1A-SULT1A3-202ENST00000565342 2195 ntTSL 2 BASIC15.32■□□□□ 0.04
CYTIPO60759 TMEM45B-201ENST00000281441 2234 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
CYTIPO60759 COPS8-202ENST00000392008 1654 ntTSL 2 BASIC15.32■□□□□ 0.04
CYTIPO60759 ASB1-201ENST00000264607 6994 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CYTIPO60759 LRRC3-201ENST00000291592 5869 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CYTIPO60759 SLC9A6-208ENST00000636206 4711 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
CYTIPO60759 CRELD1-206ENST00000452070 1778 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
CYTIPO60759 USP3-AS1-201ENST00000558831 1784 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
CYTIPO60759 DDX19B-207ENST00000563206 1765 ntTSL 5 BASIC15.32■□□□□ 0.04
CYTIPO60759 HOXA2-201ENST00000222718 1814 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CYTIPO60759 C17orf62-202ENST00000342572 1849 ntTSL 2 BASIC15.32■□□□□ 0.04
CYTIPO60759 HLA-A-204ENST00000396634 1868 ntAPPRIS P1 BASIC15.32■□□□□ 0.04
CYTIPO60759 TMTC2-201ENST00000321196 5681 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CYTIPO60759 SENP5-201ENST00000323460 6308 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CYTIPO60759 CELA2A-201ENST00000359621 919 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CYTIPO60759 LYPLA2-204ENST00000374505 907 ntTSL 3 BASIC15.32■□□□□ 0.04
CYTIPO60759 TIMM17B-202ENST00000396779 1099 ntTSL 5 BASIC15.32■□□□□ 0.04
CYTIPO60759 ODF3B-204ENST00000405135 917 ntTSL 5 BASIC15.32■□□□□ 0.04
CYTIPO60759 AL031587.1-201ENST00000410099 1055 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
CYTIPO60759 TSPY3-202ENST00000440483 414 ntTSL 5 BASIC15.32■□□□□ 0.04
CYTIPO60759 DHRS12-203ENST00000444610 1162 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CYTIPO60759 C9orf147-204ENST00000463223 863 ntTSL 3 BASIC15.32■□□□□ 0.04
CYTIPO60759 AC099805.1-202ENST00000519927 1057 ntTSL 5 BASIC15.32■□□□□ 0.04
CYTIPO60759 FIBP-212ENST00000533045 1173 ntTSL 5 BASIC15.32■□□□□ 0.04
CYTIPO60759 AC009061.1-201ENST00000567261 475 ntTSL 3 BASIC15.32■□□□□ 0.04
CYTIPO60759 ABHD17A-204ENST00000590661 1079 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
CYTIPO60759 AL512343.2-201ENST00000609423 490 ntTSL 2 BASIC15.32■□□□□ 0.04
CYTIPO60759 STRN4-204ENST00000539396 2608 ntTSL 2 BASIC15.32■□□□□ 0.04
CYTIPO60759 FOXP3-201ENST00000376197 1326 ntTSL 2 BASIC15.32■□□□□ 0.04
CYTIPO60759 METTL21A-203ENST00000411432 4805 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
CYTIPO60759 FFAR2-201ENST00000246549 2051 ntAPPRIS P1 BASIC15.32■□□□□ 0.04
CYTIPO60759 FOXE1-201ENST00000375123 3462 ntAPPRIS P1 BASIC15.32■□□□□ 0.04
CYTIPO60759 ARID1A-205ENST00000457599 6268 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
CYTIPO60759 SNTG2-202ENST00000407292 1436 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
CYTIPO60759 MFSD11-220ENST00000621483 2850 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CYTIPO60759 LRRC20-203ENST00000358141 2924 ntTSL 2 BASIC15.32■□□□□ 0.04
CYTIPO60759 LDLRAP1-201ENST00000374338 2940 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CYTIPO60759 PRR29-AS1-202ENST00000580942 2926 ntTSL 2 BASIC15.32■□□□□ 0.04
CYTIPO60759 KCNJ10-208ENST00000639408 1546 ntTSL 5 BASIC15.32■□□□□ 0.04
CYTIPO60759 TBC1D1-203ENST00000402522 1567 ntTSL 2 BASIC15.32■□□□□ 0.04
CYTIPO60759 SLC38A11-202ENST00000409058 1647 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
CYTIPO60759 PGM5-202ENST00000396396 3338 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
CYTIPO60759 ZNF48-205ENST00000613509 3339 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
CYTIPO60759 ASB10-202ENST00000377867 1738 ntTSL 2 BASIC15.31■□□□□ 0.04
CYTIPO60759 PHRF1-205ENST00000533464 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
CYTIPO60759 XKR8-201ENST00000373884 2692 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CYTIPO60759 GTDC1-219ENST00000542155 2677 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
CYTIPO60759 TMC6-202ENST00000322914 2786 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CYTIPO60759 PACS2-205ENST00000547217 2809 ntTSL 5 BASIC15.31■□□□□ 0.04
CYTIPO60759 ASTN2-202ENST00000313400 4747 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
CYTIPO60759 PAPD5-203ENST00000561678 2916 ntTSL 5 BASIC15.31■□□□□ 0.04
CYTIPO60759 ICAM3-205ENST00000589261 2024 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
CYTIPO60759 MUM1-216ENST00000627377 2235 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
CYTIPO60759 CACNA1I-201ENST00000401624 6740 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
CYTIPO60759 SPC24-206ENST00000592540 2315 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CYTIPO60759 SNX17-210ENST00000537606 2400 ntTSL 2 BASIC15.31■□□□□ 0.04
CYTIPO60759 RESP18-201ENST00000333527 795 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
CYTIPO60759 Metazoa_SRP.28-201ENST00000366402 260 ntBASIC15.31■□□□□ 0.04
CYTIPO60759 TSTD1-204ENST00000423014 593 ntAPPRIS ALT2 TSL 2 BASIC15.31■□□□□ 0.04
CYTIPO60759 BAX-213ENST00000539787 458 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
CYTIPO60759 CD63-204ENST00000546939 779 ntTSL 3 BASIC15.31■□□□□ 0.04
CYTIPO60759 AC116612.1-201ENST00000557144 562 ntTSL 3 BASIC15.31■□□□□ 0.04
CYTIPO60759 AC002091.2-201ENST00000585297 402 ntTSL 2 BASIC15.31■□□□□ 0.04
CYTIPO60759 TERC-201ENST00000602385 541 ntBASIC15.31■□□□□ 0.04
CYTIPO60759 AC008667.4-201ENST00000607370 168 ntBASIC15.31■□□□□ 0.04
CYTIPO60759 AC120114.3-201ENST00000611923 658 ntBASIC15.31■□□□□ 0.04
CYTIPO60759 SBDS-205ENST00000617799 953 ntAPPRIS ALT1 TSL 5 BASIC15.31■□□□□ 0.04
CYTIPO60759 ISG15-203ENST00000624697 788 ntAPPRIS ALT2 TSL 3 BASIC15.31■□□□□ 0.04
CYTIPO60759 ATP6AP2-220ENST00000636970 1187 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
CYTIPO60759 C21orf58-203ENST00000397680 2624 ntAPPRIS ALT2 TSL 2 BASIC15.31■□□□□ 0.04
CYTIPO60759 RND2-202ENST00000587250 4147 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CYTIPO60759 PTGER3-208ENST00000370932 1841 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
CYTIPO60759 SPRED2-206ENST00000443619 1800 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
CYTIPO60759 LZTS3-203ENST00000360342 4055 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
CYTIPO60759 EPHA10-201ENST00000319637 2050 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
CYTIPO60759 XXYLT1-205ENST00000437101 2149 ntTSL 2 BASIC15.31■□□□□ 0.04
CYTIPO60759 SLC47A2-202ENST00000350657 2285 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
CYTIPO60759 IFFO1-201ENST00000336604 2686 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 27.6 ms