Protein–RNA interactions for Protein: O60716

CTNND1, Catenin delta-1, humanhuman

Known RBP Predictions only

Length 968 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1O60716 MYO9A-214ENST00000566885 5111 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
CTNND1O60716 SLC16A13-201ENST00000308027 1748 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
CTNND1O60716 SFN-201ENST00000339276 1320 ntAPPRIS P1 BASIC19.95■□□□□ 0.78
CTNND1O60716 BSG-215ENST00000618006 1329 ntTSL 2 BASIC19.95■□□□□ 0.78
CTNND1O60716 SEPT11-201ENST00000264893 5593 ntAPPRIS P2 TSL 1 (best) BASIC19.95■□□□□ 0.78
CTNND1O60716 IMP3-201ENST00000314852 2028 ntAPPRIS P1 TSL 2 BASIC19.95■□□□□ 0.78
CTNND1O60716 CORO1C-204ENST00000541050 2487 ntAPPRIS P1 TSL 2 BASIC19.95■□□□□ 0.78
CTNND1O60716 BMP2K-208ENST00000628286 3848 ntAPPRIS ALT2 TSL 5 BASIC19.95■□□□□ 0.78
CTNND1O60716 CLDN4-201ENST00000340958 1831 ntAPPRIS P1 BASIC19.95■□□□□ 0.78
CTNND1O60716 TSSK3-201ENST00000373534 1368 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
CTNND1O60716 TCAP-201ENST00000309889 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
CTNND1O60716 UBE3C-201ENST00000348165 5229 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
CTNND1O60716 SLX1B-SULT1A4-201ENST00000344620 2424 ntTSL 2 BASIC19.94■□□□□ 0.78
CTNND1O60716 ITGA6-201ENST00000264107 5618 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
CTNND1O60716 LRRC42-201ENST00000319223 1727 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
CTNND1O60716 MADCAM1-204ENST00000587541 1723 ntTSL 2 BASIC19.94■□□□□ 0.78
CTNND1O60716 DNM1-211ENST00000627061 2724 ntTSL 5 BASIC19.94■□□□□ 0.78
CTNND1O60716 PLEKHG5-201ENST00000340850 4715 ntAPPRIS P3 TSL 5 BASIC19.94■□□□□ 0.78
CTNND1O60716 PLEKHG5-211ENST00000535355 4725 ntAPPRIS ALT2 TSL 2 BASIC19.94■□□□□ 0.78
CTNND1O60716 FAM124A-202ENST00000322475 4761 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
CTNND1O60716 GORASP1-206ENST00000422110 2523 ntTSL 2 BASIC19.94■□□□□ 0.78
CTNND1O60716 MFSD2B-202ENST00000406420 1528 ntAPPRIS P2 TSL 5 BASIC19.94■□□□□ 0.78
CTNND1O60716 HSD17B10-203ENST00000375304 916 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
CTNND1O60716 PTMS-202ENST00000389462 773 ntTSL 2 BASIC19.94■□□□□ 0.78
CTNND1O60716 GPS2P2-201ENST00000430745 888 ntBASIC19.94■□□□□ 0.78
CTNND1O60716 COX20P2-201ENST00000452636 358 ntBASIC19.94■□□□□ 0.78
CTNND1O60716 PRICKLE2-AS1-203ENST00000476308 623 ntTSL 2 BASIC19.94■□□□□ 0.78
CTNND1O60716 TMEM161B-AS1-202ENST00000501715 1101 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
CTNND1O60716 NDUFAF2-203ENST00000511107 586 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
CTNND1O60716 RNA5SP421-201ENST00000516864 134 ntBASIC19.94■□□□□ 0.78
CTNND1O60716 VASH2-211ENST00000517399 1068 ntAPPRIS ALT1 TSL 1 (best) BASIC19.94■□□□□ 0.78
CTNND1O60716 GREM1-201ENST00000560677 623 ntTSL 4 BASIC19.94■□□□□ 0.78
CTNND1O60716 LINC01225-203ENST00000563550 1244 ntBASIC19.94■□□□□ 0.78
CTNND1O60716 AC051619.7-201ENST00000568314 623 ntBASIC19.94■□□□□ 0.78
CTNND1O60716 MARCH2-206ENST00000601283 747 ntTSL 3 BASIC19.94■□□□□ 0.78
CTNND1O60716 FOXI3-201ENST00000428390 2804 ntAPPRIS P1 TSL 3 BASIC19.94■□□□□ 0.78
CTNND1O60716 ADRA1A-206ENST00000380586 2304 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
CTNND1O60716 SLC44A3-201ENST00000271227 2388 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
CTNND1O60716 EGFL6-201ENST00000361306 2398 ntAPPRIS P3 TSL 1 (best) BASIC19.94■□□□□ 0.78
CTNND1O60716 LTBP3-202ENST00000322147 4046 ntAPPRIS P3 TSL 1 (best) BASIC19.94■□□□□ 0.78
CTNND1O60716 KCTD12-201ENST00000377474 6225 ntAPPRIS P1 BASIC19.94■□□□□ 0.78
CTNND1O60716 JPT1-209ENST00000482348 1614 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
CTNND1O60716 TRPM2-202ENST00000300482 5989 ntAPPRIS P3 TSL 1 (best) BASIC19.94■□□□□ 0.78
CTNND1O60716 ECE1-203ENST00000374893 2484 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
CTNND1O60716 CGREF1-205ENST00000404694 1376 ntAPPRIS ALT2 TSL 2 BASIC19.94■□□□□ 0.78
CTNND1O60716 SNX1-213ENST00000561026 1374 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
CTNND1O60716 CLASRP-201ENST00000221455 2234 ntAPPRIS P2 TSL 1 (best) BASIC19.94■□□□□ 0.78
CTNND1O60716 SEMA3B-209ENST00000456560 2221 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
CTNND1O60716 POMT2-201ENST00000261534 4876 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
CTNND1O60716 MECP2-205ENST00000453960 1729 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
CTNND1O60716 ZNF74-202ENST00000400451 3159 ntAPPRIS P2 TSL 1 (best) BASIC19.93■□□□□ 0.78
CTNND1O60716 C18orf8-208ENST00000590868 2002 ntTSL 2 BASIC19.93■□□□□ 0.78
CTNND1O60716 ZCCHC24-202ENST00000372336 4933 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
CTNND1O60716 PITPNC1-201ENST00000299954 6359 ntAPPRIS ALT2 TSL 5 BASIC19.93■□□□□ 0.78
CTNND1O60716 WDR4-201ENST00000330317 1471 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
CTNND1O60716 ANKS3-201ENST00000304283 2662 ntAPPRIS P1 TSL 2 BASIC19.93■□□□□ 0.78
CTNND1O60716 TBX2-201ENST00000240328 3339 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
CTNND1O60716 MANBAL-204ENST00000397151 1503 ntAPPRIS P1 TSL 3 BASIC19.93■□□□□ 0.78
CTNND1O60716 MANBAL-205ENST00000397152 1539 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
CTNND1O60716 AL139398.1-201ENST00000638795 1529 ntTSL 5 BASIC19.93■□□□□ 0.78
CTNND1O60716 FAM46A-203ENST00000369756 5537 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
CTNND1O60716 SHTN1-203ENST00000392901 2190 ntAPPRIS ALT2 TSL 2 BASIC19.93■□□□□ 0.78
CTNND1O60716 SSBP3-203ENST00000371319 1578 ntAPPRIS ALT1 TSL 2 BASIC19.93■□□□□ 0.78
CTNND1O60716 CEP19-201ENST00000399942 1172 ntAPPRIS ALT2 TSL 5 BASIC19.93■□□□□ 0.78
CTNND1O60716 AC092474.2-201ENST00000424288 719 ntBASIC19.93■□□□□ 0.78
CTNND1O60716 SPCS2P4-201ENST00000436160 681 ntBASIC19.93■□□□□ 0.78
CTNND1O60716 FAM72B-205ENST00000471903 676 ntTSL 5 BASIC19.93■□□□□ 0.78
CTNND1O60716 AC091053.1-201ENST00000529883 744 ntTSL 3 BASIC19.93■□□□□ 0.78
CTNND1O60716 AC109635.5-201ENST00000533593 962 ntBASIC19.93■□□□□ 0.78
CTNND1O60716 AC069262.1-201ENST00000539058 672 ntBASIC19.93■□□□□ 0.78
CTNND1O60716 AQP6-203ENST00000551733 849 ntTSL 3 BASIC19.93■□□□□ 0.78
CTNND1O60716 COX5A-203ENST00000564811 568 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
CTNND1O60716 AC009053.3-201ENST00000567148 574 ntTSL 4 BASIC19.93■□□□□ 0.78
CTNND1O60716 GNAO1-210ENST00000569295 930 ntTSL 2 BASIC19.93■□□□□ 0.78
CTNND1O60716 GALNT2-201ENST00000366672 4454 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
CTNND1O60716 FGFR1-203ENST00000341462 6054 ntTSL 5 BASIC19.93■□□□□ 0.78
CTNND1O60716 ACYP2-203ENST00000406041 1913 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
CTNND1O60716 LMNA-208ENST00000448611 1943 ntTSL 2 BASIC19.93■□□□□ 0.78
CTNND1O60716 SARDH-202ENST00000371867 1326 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
CTNND1O60716 ZNF419-201ENST00000221735 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
CTNND1O60716 PPM1G-201ENST00000344034 2311 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
CTNND1O60716 TEAD4-202ENST00000359864 1690 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
CTNND1O60716 AC133963.1-201ENST00000504166 1679 ntBASIC19.93■□□□□ 0.78
CTNND1O60716 TLK2-203ENST00000346027 3449 ntAPPRIS P3 TSL 1 (best) BASIC19.93■□□□□ 0.78
CTNND1O60716 AC018470.1-201ENST00000624790 3129 ntBASIC19.93■□□□□ 0.78
CTNND1O60716 ATP6V1E1-201ENST00000253413 1402 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
CTNND1O60716 APLP2-210ENST00000528499 2530 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
CTNND1O60716 BTBD11-201ENST00000280758 5767 ntAPPRIS P3 TSL 5 BASIC19.93■□□□□ 0.78
CTNND1O60716 SPRED2-206ENST00000443619 1800 ntAPPRIS P1 TSL 2 BASIC19.92■□□□□ 0.78
CTNND1O60716 AL353732.1-201ENST00000569618 1459 ntBASIC19.92■□□□□ 0.78
CTNND1O60716 ACSF2-201ENST00000300441 2235 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
CTNND1O60716 ATP2A2-201ENST00000308664 4453 ntAPPRIS ALT1 TSL 1 (best) BASIC19.92■□□□□ 0.78
CTNND1O60716 ANXA8-203ENST00000583874 1860 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
CTNND1O60716 CMIP-209ENST00000566513 2288 ntTSL 5 BASIC19.92■□□□□ 0.78
CTNND1O60716 AC012317.2-201ENST00000623305 2251 ntBASIC19.92■□□□□ 0.78
CTNND1O60716 FKBP10-201ENST00000321562 2662 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
CTNND1O60716 LRP3-201ENST00000253193 3807 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
CTNND1O60716 LINC00461-203ENST00000504246 2300 ntTSL 2 BASIC19.92■□□□□ 0.78
CTNND1O60716 PRR15-201ENST00000319694 1678 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
CTNND1O60716 PSENEN-202ENST00000587708 1661 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 59.5 ms