Protein–RNA interactions for Protein: O60245

PCDH7, Protocadherin-7, humanhuman

Predictions only

Length 1,069 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH7O60245 SPRED2-206ENST00000443619 1800 ntAPPRIS P1 TSL 2 BASIC16.42■□□□□ 0.22
PCDH7O60245 ZNF133-205ENST00000401790 2642 ntAPPRIS ALT2 TSL 2 BASIC16.42■□□□□ 0.22
PCDH7O60245 ZNF133-206ENST00000402618 2622 ntTSL 2 BASIC16.42■□□□□ 0.22
PCDH7O60245 PIGX-202ENST00000392391 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
PCDH7O60245 HGS-201ENST00000329138 2970 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
PCDH7O60245 PDS5A-201ENST00000303538 7176 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
PCDH7O60245 ZNF454-201ENST00000320129 2332 ntAPPRIS P1 TSL 2 BASIC16.41■□□□□ 0.22
PCDH7O60245 GTPBP8-203ENST00000383678 1360 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
PCDH7O60245 NECAB2-203ENST00000565691 2064 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
PCDH7O60245 CELF6-204ENST00000543764 1676 ntTSL 2 BASIC16.41■□□□□ 0.22
PCDH7O60245 JHDM1D-AS1-201ENST00000566699 2380 ntBASIC16.41■□□□□ 0.22
PCDH7O60245 GPR137-212ENST00000539851 1843 ntTSL 2 BASIC16.41■□□□□ 0.22
PCDH7O60245 MAGI1-213ENST00000483466 4791 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
PCDH7O60245 MED16-201ENST00000269814 1199 ntTSL 5 BASIC16.41■□□□□ 0.22
PCDH7O60245 ROMO1-203ENST00000374077 422 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
PCDH7O60245 HLA-DMA-201ENST00000374843 1123 ntAPPRIS P1 BASIC16.41■□□□□ 0.22
PCDH7O60245 TLE1-202ENST00000376484 666 ntTSL 3 BASIC16.41■□□□□ 0.22
PCDH7O60245 AGGF1P2-201ENST00000426656 2106 ntBASIC16.41■□□□□ 0.22
PCDH7O60245 AL645941.2-201ENST00000429234 612 ntAPPRIS P1 TSL 2 BASIC16.41■□□□□ 0.22
PCDH7O60245 AC078883.2-201ENST00000441212 558 ntTSL 3 BASIC16.41■□□□□ 0.22
PCDH7O60245 NUS1P1-201ENST00000446295 882 ntBASIC16.41■□□□□ 0.22
PCDH7O60245 KRT16P4-201ENST00000453883 522 ntBASIC16.41■□□□□ 0.22
PCDH7O60245 SURF4-206ENST00000485435 1206 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
PCDH7O60245 TMEM33-208ENST00000513702 1092 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
PCDH7O60245 RAB6A-207ENST00000541588 758 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
PCDH7O60245 GSTZ1-207ENST00000553586 979 ntAPPRIS ALT1 TSL 5 BASIC16.41■□□□□ 0.22
PCDH7O60245 ZFPM1-205ENST00000569086 563 ntTSL 2 BASIC16.41■□□□□ 0.22
PCDH7O60245 CHRNB1-207ENST00000575379 1095 ntTSL 2 BASIC16.41■□□□□ 0.22
PCDH7O60245 AL162497.1-201ENST00000615635 518 ntTSL 4 BASIC16.41■□□□□ 0.22
PCDH7O60245 DIXDC1-208ENST00000615255 4825 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
PCDH7O60245 UNKL-202ENST00000301712 1431 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
PCDH7O60245 SIGLEC16-201ENST00000599858 1437 ntBASIC16.41■□□□□ 0.22
PCDH7O60245 ABCG5-201ENST00000260645 2740 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
PCDH7O60245 PPOX-202ENST00000367999 1740 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
PCDH7O60245 ACTRT3-201ENST00000330368 2005 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
PCDH7O60245 FAM184A-201ENST00000338891 4141 ntAPPRIS P4 TSL 1 (best) BASIC16.41■□□□□ 0.22
PCDH7O60245 GHRHR-201ENST00000326139 1602 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
PCDH7O60245 MED25-202ENST00000538643 1623 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
PCDH7O60245 B4GALNT2-201ENST00000300404 1906 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
PCDH7O60245 REL-202ENST00000394479 2398 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
PCDH7O60245 KLC1-202ENST00000334553 2524 ntTSL 5 BASIC16.41■□□□□ 0.22
PCDH7O60245 DMRTC2-204ENST00000596827 1675 ntTSL 2 BASIC16.4■□□□□ 0.22
PCDH7O60245 AL109955.1-201ENST00000417346 1540 ntTSL 2 BASIC16.4■□□□□ 0.22
PCDH7O60245 C16orf70-208ENST00000569600 1353 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
PCDH7O60245 AC004835.1-201ENST00000428222 2907 ntTSL 5 BASIC16.4■□□□□ 0.22
PCDH7O60245 CCDC184-201ENST00000316554 2343 ntAPPRIS P1 BASIC16.4■□□□□ 0.22
PCDH7O60245 SLC41A3-203ENST00000360370 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
PCDH7O60245 GTDC1-219ENST00000542155 2677 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
PCDH7O60245 ID2-202ENST00000331129 623 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
PCDH7O60245 EDN3-203ENST00000371025 1153 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
PCDH7O60245 GGT1-204ENST00000401885 968 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
PCDH7O60245 FOXD3-AS1-201ENST00000418244 941 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
PCDH7O60245 ACTG1P4-201ENST00000425123 1122 ntBASIC16.4■□□□□ 0.22
PCDH7O60245 S100A2-206ENST00000497140 697 ntTSL 2 BASIC16.4■□□□□ 0.22
PCDH7O60245 CCDC61-202ENST00000594087 1017 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
PCDH7O60245 MED16-213ENST00000616387 1078 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
PCDH7O60245 TP53I11-223ENST00000627720 195 ntTSL 5 BASIC16.4■□□□□ 0.22
PCDH7O60245 RDH13-223ENST00000610356 1931 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
PCDH7O60245 NKAIN1-201ENST00000373736 2589 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
PCDH7O60245 AC079776.2-201ENST00000641154 1609 ntBASIC16.4■□□□□ 0.22
PCDH7O60245 PLCD3-212ENST00000619929 6107 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
PCDH7O60245 VARS-215ENST00000375663 4312 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
PCDH7O60245 ARHGAP44-202ENST00000340825 4211 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
PCDH7O60245 ARHGAP44-203ENST00000379672 4228 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
PCDH7O60245 FRMD8P1-201ENST00000440433 1524 ntBASIC16.4■□□□□ 0.22
PCDH7O60245 AES-201ENST00000221561 1884 ntTSL 1 (best) BASIC16.39■□□□□ 0.22
PCDH7O60245 WBP2-219ENST00000626827 1867 ntTSL 5 BASIC16.39■□□□□ 0.22
PCDH7O60245 MAIP1-202ENST00000392290 1386 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
PCDH7O60245 USP2-202ENST00000455332 2903 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
PCDH7O60245 DUSP8-202ENST00000397374 4480 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
PCDH7O60245 EWSAT1-206ENST00000558922 1725 ntTSL 5 BASIC16.39■□□□□ 0.21
PCDH7O60245 AC138969.1-205ENST00000381497 1552 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
PCDH7O60245 C5orf24-202ENST00000394976 5065 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
PCDH7O60245 NTRK2-207ENST00000376214 5608 ntAPPRIS P3 TSL 5 BASIC16.39■□□□□ 0.21
PCDH7O60245 LGMN-202ENST00000393218 2115 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
PCDH7O60245 ZNF84-201ENST00000327668 7162 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
PCDH7O60245 AC097637.2-201ENST00000624096 1997 ntBASIC16.39■□□□□ 0.21
PCDH7O60245 RGN-202ENST00000352078 1611 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
PCDH7O60245 SPRYD7-202ENST00000378195 3086 ntTSL 2 BASIC16.39■□□□□ 0.21
PCDH7O60245 FTMT-201ENST00000321339 879 ntAPPRIS P1 BASIC16.39■□□□□ 0.21
PCDH7O60245 ATPIF1-201ENST00000335514 494 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
PCDH7O60245 RBCK1-206ENST00000400247 790 ntTSL 2 BASIC16.39■□□□□ 0.21
PCDH7O60245 AL645608.6-201ENST00000418300 402 ntTSL 3 BASIC16.39■□□□□ 0.21
PCDH7O60245 SLC2A1-204ENST00000460369 541 ntTSL 2 BASIC16.39■□□□□ 0.21
PCDH7O60245 FOSL1P1-201ENST00000511041 816 ntBASIC16.39■□□□□ 0.21
PCDH7O60245 AC127496.4-201ENST00000571591 549 ntTSL 4 BASIC16.39■□□□□ 0.21
PCDH7O60245 COPE-211ENST00000600932 1144 ntTSL 5 BASIC16.39■□□□□ 0.21
PCDH7O60245 IGHV3OR16-7-201ENST00000604106 360 ntBASIC16.39■□□□□ 0.21
PCDH7O60245 DNASE1L2-206ENST00000613572 1260 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
PCDH7O60245 AC073592.4-201ENST00000623827 446 ntBASIC16.39■□□□□ 0.21
PCDH7O60245 FBXL22-204ENST00000638704 729 ntAPPRIS ALT2 TSL 2 BASIC16.39■□□□□ 0.21
PCDH7O60245 TMTC4-203ENST00000376234 3483 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
PCDH7O60245 ORAI2-205ENST00000478730 5531 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.21
PCDH7O60245 PCDHA2-201ENST00000378132 2626 ntAPPRIS ALT2 BASIC16.39■□□□□ 0.21
PCDH7O60245 CLDN15-208ENST00000611078 1509 ntTSL 5 BASIC16.39■□□□□ 0.21
PCDH7O60245 HOXC6-201ENST00000243108 1733 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
PCDH7O60245 TSC2-204ENST00000401874 5421 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
PCDH7O60245 LDLRAP1-201ENST00000374338 2940 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
PCDH7O60245 CARNS1-201ENST00000307823 3942 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
PCDH7O60245 IL34-202ENST00000429149 1779 ntAPPRIS P2 TSL 5 BASIC16.38■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 48.7 ms