Protein–RNA interactions for Protein: O43761

SYNGR3, Synaptogyrin-3, humanhuman

Predictions only

Length 229 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGR3O43761 CACNA1A-214ENST00000614285 8410 ntAPPRIS ALT2 TSL 5 BASIC14.98□□□□□ -0.01
SYNGR3O43761 ALOX12-201ENST00000251535 2358 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
SYNGR3O43761 TMEM216-201ENST00000334888 1306 ntAPPRIS ALT2 TSL 2 BASIC14.98□□□□□ -0.01
SYNGR3O43761 PCMTD1-206ENST00000521344 1712 ntTSL 3 BASIC14.98□□□□□ -0.01
SYNGR3O43761 MADCAM1-204ENST00000587541 1723 ntTSL 2 BASIC14.98□□□□□ -0.01
SYNGR3O43761 DIAPH1-201ENST00000253811 5789 ntAPPRIS ALT2 TSL 5 BASIC14.98□□□□□ -0.01
SYNGR3O43761 DIAPH1-202ENST00000389054 5795 ntAPPRIS P4 TSL 5 BASIC14.98□□□□□ -0.01
SYNGR3O43761 DIAPH1-204ENST00000398557 5789 ntAPPRIS ALT2 TSL 5 BASIC14.98□□□□□ -0.01
SYNGR3O43761 PTPN21-208ENST00000556564 6166 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
SYNGR3O43761 SYTL3-202ENST00000360448 2504 ntAPPRIS ALT1 TSL 5 BASIC14.98□□□□□ -0.01
SYNGR3O43761 SP3-203ENST00000418194 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
SYNGR3O43761 MEF2A-204ENST00000557785 2854 ntAPPRIS ALT1 TSL 5 BASIC14.98□□□□□ -0.01
SYNGR3O43761 NCAPH2-203ENST00000395701 2077 ntTSL 2 BASIC14.98□□□□□ -0.01
SYNGR3O43761 NECAB2-203ENST00000565691 2064 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
SYNGR3O43761 LGALS12-201ENST00000255684 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
SYNGR3O43761 MRPL28-201ENST00000199706 1098 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
SYNGR3O43761 HBA2-201ENST00000251595 605 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
SYNGR3O43761 TFF3-201ENST00000291525 407 ntAPPRIS ALT2 TSL 5 BASIC14.98□□□□□ -0.01
SYNGR3O43761 KRTAP1-1-201ENST00000306271 903 ntAPPRIS P1 BASIC14.98□□□□□ -0.01
SYNGR3O43761 TCEAL2-201ENST00000329035 1080 ntAPPRIS P1 TSL 5 BASIC14.98□□□□□ -0.01
SYNGR3O43761 RESP18-201ENST00000333527 795 ntAPPRIS P2 TSL 1 (best) BASIC14.98□□□□□ -0.01
SYNGR3O43761 POMC-203ENST00000395826 959 ntAPPRIS P1 TSL 2 BASIC14.98□□□□□ -0.01
SYNGR3O43761 AC016999.1-201ENST00000447880 452 ntTSL 3 BASIC14.98□□□□□ -0.01
SYNGR3O43761 SMN1-203ENST00000503079 1219 ntTSL 5 BASIC14.98□□□□□ -0.01
SYNGR3O43761 AP001107.6-201ENST00000526655 516 ntTSL 3 BASIC14.98□□□□□ -0.01
SYNGR3O43761 MTDHP4-201ENST00000600287 670 ntBASIC14.98□□□□□ -0.01
SYNGR3O43761 CHMP4A-211ENST00000609024 735 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
SYNGR3O43761 EML3-201ENST00000278845 3017 ntAPPRIS ALT1 TSL 5 BASIC14.98□□□□□ -0.01
SYNGR3O43761 NIPAL2-201ENST00000341166 4581 ntTSL 2 BASIC14.98□□□□□ -0.01
SYNGR3O43761 CCNYL1-201ENST00000295414 3767 ntTSL 5 BASIC14.98□□□□□ -0.01
SYNGR3O43761 SLC47A1-209ENST00000575023 2224 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
SYNGR3O43761 AC092068.3-201ENST00000587894 2016 ntBASIC14.98□□□□□ -0.01
SYNGR3O43761 MAP3K8-207ENST00000542547 2782 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
SYNGR3O43761 AZIN2-203ENST00000373441 1443 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
SYNGR3O43761 NCF1C-201ENST00000438382 1427 ntBASIC14.98□□□□□ -0.01
SYNGR3O43761 CYBA-210ENST00000569359 1415 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
SYNGR3O43761 PDX1-201ENST00000381033 2501 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
SYNGR3O43761 HIST1H2BN-204ENST00000612898 1723 ntAPPRIS P1 BASIC14.97□□□□□ -0.01
SYNGR3O43761 SIPA1-209ENST00000534313 3521 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
SYNGR3O43761 SLC39A7-202ENST00000374677 2409 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
SYNGR3O43761 SKP2-201ENST00000274254 1537 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
SYNGR3O43761 SEPHS2-201ENST00000478753 2551 ntAPPRIS P1 BASIC14.97□□□□□ -0.01
SYNGR3O43761 CACNA1A-215ENST00000635727 7536 ntAPPRIS ALT2 TSL 5 BASIC14.97□□□□□ -0.01
SYNGR3O43761 SLC12A2-208ENST00000628403 3617 ntAPPRIS ALT2 TSL 5 BASIC14.97□□□□□ -0.01
SYNGR3O43761 TRAPPC3-209ENST00000616395 1336 ntTSL 3 BASIC14.97□□□□□ -0.01
SYNGR3O43761 AC068888.1-203ENST00000546566 1650 ntTSL 2 BASIC14.97□□□□□ -0.01
SYNGR3O43761 COTL1-203ENST00000564057 1677 ntTSL 5 BASIC14.97□□□□□ -0.01
SYNGR3O43761 DMRTC2-204ENST00000596827 1675 ntTSL 2 BASIC14.97□□□□□ -0.01
SYNGR3O43761 AKIRIN1-202ENST00000432648 2741 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
SYNGR3O43761 CD24-201ENST00000606017 2180 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
SYNGR3O43761 RNF217-211ENST00000560949 5145 ntAPPRIS ALT2 TSL 5 BASIC14.97□□□□□ -0.01
SYNGR3O43761 ABLIM2-203ENST00000361737 3396 ntAPPRIS ALT2 TSL 2 BASIC14.97□□□□□ -0.01
SYNGR3O43761 SCOC-211ENST00000614192 1959 ntAPPRIS P2 TSL 1 (best) BASIC14.97□□□□□ -0.01
SYNGR3O43761 PITHD1-201ENST00000246151 1603 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
SYNGR3O43761 ADCY6-202ENST00000357869 5748 ntTSL 2 BASIC14.97□□□□□ -0.01
SYNGR3O43761 VAV2-203ENST00000406606 4691 ntAPPRIS P2 TSL 1 (best) BASIC14.97□□□□□ -0.01
SYNGR3O43761 LINC00336-201ENST00000477984 2107 ntTSL 2 BASIC14.97□□□□□ -0.01
SYNGR3O43761 ORAOV1-210ENST00000539414 817 ntAPPRIS ALT1 TSL 2 BASIC14.97□□□□□ -0.01
SYNGR3O43761 RNASEK-203ENST00000549393 783 ntTSL 3 BASIC14.97□□□□□ -0.01
SYNGR3O43761 TMEM220-203ENST00000578345 559 ntAPPRIS ALT2 TSL 2 BASIC14.97□□□□□ -0.01
SYNGR3O43761 PNMT-203ENST00000581428 677 ntTSL 2 BASIC14.97□□□□□ -0.01
SYNGR3O43761 AL353135.1-201ENST00000606729 504 ntBASIC14.97□□□□□ -0.01
SYNGR3O43761 AL589182.2-201ENST00000619332 1049 ntBASIC14.97□□□□□ -0.01
SYNGR3O43761 AC148477.8-201ENST00000624298 468 ntBASIC14.97□□□□□ -0.01
SYNGR3O43761 AC064853.6-201ENST00000642029 303 ntAPPRIS P1 BASIC14.97□□□□□ -0.01
SYNGR3O43761 DMRTA1-201ENST00000325870 5569 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
SYNGR3O43761 AC105020.1-201ENST00000435356 2205 ntBASIC14.97□□□□□ -0.01
SYNGR3O43761 ING5-201ENST00000313552 5196 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
SYNGR3O43761 RTCA-203ENST00000370128 2535 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
SYNGR3O43761 SMARCC2-202ENST00000347471 3839 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
SYNGR3O43761 PHRF1-202ENST00000413872 5224 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
SYNGR3O43761 PGRMC2-208ENST00000613358 3783 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
SYNGR3O43761 DPF3-204ENST00000546183 1514 ntTSL 2 BASIC14.97□□□□□ -0.01
SYNGR3O43761 CDIPT-209ENST00000569956 1532 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
SYNGR3O43761 XXYLT1-205ENST00000437101 2149 ntTSL 2 BASIC14.96□□□□□ -0.01
SYNGR3O43761 NF2-208ENST00000403435 2568 ntTSL 5 BASIC14.96□□□□□ -0.01
SYNGR3O43761 RPH3AL-222ENST00000618002 2578 ntAPPRIS P2 TSL 5 BASIC14.96□□□□□ -0.01
SYNGR3O43761 SMPD4-202ENST00000409031 4896 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
SYNGR3O43761 HIBCH-201ENST00000359678 1939 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
SYNGR3O43761 PDE2A-226ENST00000544570 3119 ntTSL 5 BASIC14.96□□□□□ -0.01
SYNGR3O43761 CDH24-204ENST00000487137 3438 ntAPPRIS P1 TSL 5 BASIC14.96□□□□□ -0.01
SYNGR3O43761 HECTD2-204ENST00000446394 4939 ntTSL 2 BASIC14.96□□□□□ -0.01
SYNGR3O43761 ASPM-201ENST00000294732 6132 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
SYNGR3O43761 ART5-201ENST00000359918 1241 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
SYNGR3O43761 TCEAL2-202ENST00000372780 1100 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
SYNGR3O43761 RPP38-203ENST00000378202 1030 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
SYNGR3O43761 ISPD-201ENST00000399310 1709 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
SYNGR3O43761 POM121L12-201ENST00000408890 1283 ntAPPRIS P1 BASIC14.96□□□□□ -0.01
SYNGR3O43761 CCDC28B-202ENST00000421922 1415 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
SYNGR3O43761 LINC01237-203ENST00000430555 843 ntTSL 4 BASIC14.96□□□□□ -0.01
SYNGR3O43761 AC007834.1-201ENST00000446473 728 ntTSL 3 BASIC14.96□□□□□ -0.01
SYNGR3O43761 NDUFB2-209ENST00000472695 503 ntTSL 5 BASIC14.96□□□□□ -0.01
SYNGR3O43761 RNA5SP419-201ENST00000515908 135 ntBASIC14.96□□□□□ -0.01
SYNGR3O43761 AP006621.3-203ENST00000525941 610 ntTSL 2 BASIC14.96□□□□□ -0.01
SYNGR3O43761 OR7E14P-202ENST00000530490 1290 ntBASIC14.96□□□□□ -0.01
SYNGR3O43761 TRMT112-203ENST00000535750 823 ntTSL 2 BASIC14.96□□□□□ -0.01
SYNGR3O43761 ZBP1-208ENST00000541799 1041 ntAPPRIS ALT2 TSL 5 BASIC14.96□□□□□ -0.01
SYNGR3O43761 RPS15A-205ENST00000565420 802 ntAPPRIS P1 TSL 2 BASIC14.96□□□□□ -0.01
SYNGR3O43761 PRKN-208ENST00000610470 531 ntTSL 2 BASIC14.96□□□□□ -0.01
SYNGR3O43761 PRKN-209ENST00000612485 225 ntTSL 5 BASIC14.96□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 27.2 ms