Protein–RNA interactions for Protein: O43633

CHMP2A, Charged multivesicular body protein 2a, humanhuman

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2AO43633 SELENBP1-204ENST00000426705 1928 ntTSL 2 BASIC19.31■□□□□ 0.68
CHMP2AO43633 SMARCC2-202ENST00000347471 3839 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
CHMP2AO43633 L1CAM-203ENST00000370055 4655 ntTSL 5 BASIC19.31■□□□□ 0.68
CHMP2AO43633 PFKFB3-215ENST00000536985 2094 ntTSL 2 BASIC19.31■□□□□ 0.68
CHMP2AO43633 TBC1D4-202ENST00000377636 6364 ntAPPRIS P3 TSL 2 BASIC19.31■□□□□ 0.68
CHMP2AO43633 TVP23C-204ENST00000438826 1852 ntAPPRIS ALT1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CHMP2AO43633 BCAR1-201ENST00000162330 3221 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
CHMP2AO43633 PRRT4-205ENST00000489835 2313 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
CHMP2AO43633 PCDHGC3-205ENST00000617641 2346 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
CHMP2AO43633 SPRED2-206ENST00000443619 1800 ntAPPRIS P1 TSL 2 BASIC19.3■□□□□ 0.68
CHMP2AO43633 LINC02415-201ENST00000508505 1315 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
CHMP2AO43633 CLN3-216ENST00000565316 1318 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
CHMP2AO43633 TNIP1-221ENST00000610874 2629 ntTSL 5 BASIC19.3■□□□□ 0.68
CHMP2AO43633 LMNA-205ENST00000368299 2253 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
CHMP2AO43633 A4GALT-202ENST00000381278 1935 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
CHMP2AO43633 ZNF710-201ENST00000268154 4617 ntAPPRIS P1 TSL 2 BASIC19.3■□□□□ 0.68
CHMP2AO43633 ZNF789-202ENST00000379724 510 ntTSL 2 BASIC19.3■□□□□ 0.68
CHMP2AO43633 AP1S3-203ENST00000396654 830 ntAPPRIS P2 TSL 2 BASIC19.3■□□□□ 0.68
CHMP2AO43633 CRCP-205ENST00000431089 942 ntTSL 2 BASIC19.3■□□□□ 0.68
CHMP2AO43633 TREML1-203ENST00000437044 647 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
CHMP2AO43633 ITGB1BP1-205ENST00000456913 1043 ntTSL 2 BASIC19.3■□□□□ 0.68
CHMP2AO43633 ITGB1BP1-216ENST00000488451 874 ntTSL 3 BASIC19.3■□□□□ 0.68
CHMP2AO43633 OAZ1-202ENST00000582888 969 ntAPPRIS ALT1 TSL 5 BASIC19.3■□□□□ 0.68
CHMP2AO43633 TERC-201ENST00000602385 541 ntBASIC19.3■□□□□ 0.68
CHMP2AO43633 AC027601.4-201ENST00000611259 610 ntBASIC19.3■□□□□ 0.68
CHMP2AO43633 NPTN-202ENST00000351217 2817 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
CHMP2AO43633 DMRTA2-201ENST00000404795 3137 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
CHMP2AO43633 FGFR4-207ENST00000502906 2638 ntAPPRIS P4 TSL 1 (best) BASIC19.3■□□□□ 0.68
CHMP2AO43633 DAG1-201ENST00000308775 5522 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CHMP2AO43633 HEYL-201ENST00000372852 3661 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CHMP2AO43633 CACNA1B-205ENST00000371363 9758 ntAPPRIS ALT2 TSL 5 BASIC19.3■□□□□ 0.68
CHMP2AO43633 HNRNPRP1-201ENST00000453465 1695 ntBASIC19.3■□□□□ 0.68
CHMP2AO43633 AC116353.5-201ENST00000638148 1699 ntBASIC19.3■□□□□ 0.68
CHMP2AO43633 PIP5K1A-207ENST00000441902 2297 ntTSL 2 BASIC19.3■□□□□ 0.68
CHMP2AO43633 ADGRB2-201ENST00000373655 5400 ntAPPRIS P4 TSL 1 (best) BASIC19.3■□□□□ 0.68
CHMP2AO43633 TRIM33-201ENST00000358465 8339 ntAPPRIS P4 TSL 1 (best) BASIC19.29■□□□□ 0.68
CHMP2AO43633 CPEB2-AS1-201ENST00000500394 1630 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
CHMP2AO43633 HMGCLL1-202ENST00000308161 1314 ntTSL 2 BASIC19.29■□□□□ 0.68
CHMP2AO43633 RBPMS-203ENST00000339877 1341 ntAPPRIS ALT1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CHMP2AO43633 USH1C-205ENST00000527020 2159 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
CHMP2AO43633 EGFEM1P-202ENST00000431685 1563 ntBASIC19.29■□□□□ 0.68
CHMP2AO43633 CFC1-202ENST00000615342 1554 ntTSL 5 BASIC19.29■□□□□ 0.68
CHMP2AO43633 KDSR-202ENST00000406396 5447 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CHMP2AO43633 ANAPC13-206ENST00000514612 1420 ntAPPRIS P1 TSL 2 BASIC19.29■□□□□ 0.68
CHMP2AO43633 HSPB1-201ENST00000248553 909 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CHMP2AO43633 YIF1B-203ENST00000339413 1225 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CHMP2AO43633 ARPC4-203ENST00000433034 926 ntTSL 3 BASIC19.29■□□□□ 0.68
CHMP2AO43633 SUMO2P17-202ENST00000508743 738 ntTSL 3 BASIC19.29■□□□□ 0.68
CHMP2AO43633 AC009567.1-201ENST00000515071 525 ntTSL 4 BASIC19.29■□□□□ 0.68
CHMP2AO43633 FGFR1OP2-206ENST00000546072 956 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
CHMP2AO43633 RIN3-211ENST00000557762 517 ntTSL 3 BASIC19.29■□□□□ 0.68
CHMP2AO43633 TMEM178A-206ENST00000618232 1286 ntTSL 5 BASIC19.29■□□□□ 0.68
CHMP2AO43633 AC244517.5-205ENST00000623615 575 ntTSL 4 BASIC19.29■□□□□ 0.68
CHMP2AO43633 COTL1-203ENST00000564057 1677 ntTSL 5 BASIC19.29■□□□□ 0.68
CHMP2AO43633 ZNF74-201ENST00000357502 2788 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
CHMP2AO43633 KLHL22-201ENST00000328879 2616 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CHMP2AO43633 IL12RB2-202ENST00000371000 2454 ntTSL 2 BASIC19.29■□□□□ 0.68
CHMP2AO43633 AC093627.6-201ENST00000478759 1365 ntTSL 5 BASIC19.29■□□□□ 0.68
CHMP2AO43633 KCNQ2-215ENST00000629241 2853 ntTSL 5 BASIC19.29■□□□□ 0.68
CHMP2AO43633 FAM9B-202ENST00000362066 2047 ntTSL 2 BASIC19.29■□□□□ 0.68
CHMP2AO43633 GPX3-209ENST00000614343 1478 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
CHMP2AO43633 ARPIN-202ENST00000460685 2145 ntTSL 2 BASIC19.28■□□□□ 0.68
CHMP2AO43633 DAPK2-202ENST00000457488 1741 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CHMP2AO43633 TMEM50B-210ENST00000542230 2375 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CHMP2AO43633 TLK2-203ENST00000346027 3449 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
CHMP2AO43633 EPHX2-204ENST00000518379 1959 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
CHMP2AO43633 ARHGAP6-202ENST00000337414 5117 ntAPPRIS P4 TSL 1 (best) BASIC19.28■□□□□ 0.68
CHMP2AO43633 ANKRD23-202ENST00000331001 2455 ntTSL 2 BASIC19.28■□□□□ 0.68
CHMP2AO43633 HSPA8-224ENST00000534624 2463 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CHMP2AO43633 MRPL20P1-201ENST00000400819 433 ntBASIC19.28■□□□□ 0.68
CHMP2AO43633 AC109309.1-201ENST00000418995 435 ntTSL 3 BASIC19.28■□□□□ 0.68
CHMP2AO43633 TRMT112-202ENST00000535126 704 ntTSL 2 BASIC19.28■□□□□ 0.68
CHMP2AO43633 AC025162.1-201ENST00000554022 565 ntTSL 4 BASIC19.28■□□□□ 0.68
CHMP2AO43633 TCAP-202ENST00000578283 583 ntTSL 5 BASIC19.28■□□□□ 0.68
CHMP2AO43633 AC064836.3-201ENST00000607928 673 ntBASIC19.28■□□□□ 0.68
CHMP2AO43633 C8orf33-201ENST00000331434 2677 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CHMP2AO43633 KRCC1-201ENST00000347055 1753 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CHMP2AO43633 LINC00029-201ENST00000370341 1631 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
CHMP2AO43633 ARFRP1-212ENST00000618838 1623 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
CHMP2AO43633 NSMF-204ENST00000371473 3556 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
CHMP2AO43633 TRIM17-201ENST00000295033 1730 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CHMP2AO43633 CCDC144A-210ENST00000456009 2306 ntTSL 5 BASIC19.28■□□□□ 0.68
CHMP2AO43633 PCCB-201ENST00000251654 1833 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
CHMP2AO43633 KIAA0895-208ENST00000440378 2441 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
CHMP2AO43633 PPARD-202ENST00000337400 2041 ntTSL 5 BASIC19.27■□□□□ 0.68
CHMP2AO43633 ICAM3-205ENST00000589261 2024 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
CHMP2AO43633 TAP1-201ENST00000354258 2959 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
CHMP2AO43633 NARFL-218ENST00000568545 2486 ntTSL 2 BASIC19.27■□□□□ 0.68
CHMP2AO43633 ZNF140-210ENST00000544426 2340 ntTSL 2 BASIC19.27■□□□□ 0.68
CHMP2AO43633 TJP1-212ENST00000614355 6977 ntAPPRIS ALT2 TSL 5 BASIC19.27■□□□□ 0.68
CHMP2AO43633 METTL26-201ENST00000301686 794 ntAPPRIS P1 TSL 2 BASIC19.27■□□□□ 0.68
CHMP2AO43633 METTL26-205ENST00000397666 726 ntTSL 2 BASIC19.27■□□□□ 0.68
CHMP2AO43633 MSRB1-202ENST00000399753 847 ntTSL 3 BASIC19.27■□□□□ 0.68
CHMP2AO43633 WWOX-204ENST00000408984 1227 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
CHMP2AO43633 PDE6D-202ENST00000409772 672 ntTSL 3 BASIC19.27■□□□□ 0.68
CHMP2AO43633 CRYGEP-201ENST00000412192 528 ntBASIC19.27■□□□□ 0.68
CHMP2AO43633 KRT18P3-201ENST00000451602 1288 ntBASIC19.27■□□□□ 0.68
CHMP2AO43633 SMIM27-204ENST00000453396 1003 ntAPPRIS ALT2 TSL 3 BASIC19.27■□□□□ 0.68
CHMP2AO43633 AP000442.1-201ENST00000533552 769 ntTSL 5 BASIC19.27■□□□□ 0.68
CHMP2AO43633 ICAM2-205ENST00000578379 1064 ntTSL 5 BASIC19.27■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 52 ms