Protein–RNA interactions for Protein: O43325

LYRM1, LYR motif-containing protein 1, humanhuman

Predictions only

Length 122 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYRM1O43325 ARHGAP9-201ENST00000393791 2597 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
LYRM1O43325 GUCA1A-203ENST00000394237 2233 ntAPPRIS P1 TSL 2 BASIC14.78□□□□□ -0.04
LYRM1O43325 AC007182.1-201ENST00000455232 2159 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
LYRM1O43325 PTPN13-204ENST00000436978 8573 ntAPPRIS P4 TSL 5 BASIC14.78□□□□□ -0.04
LYRM1O43325 CFLAR-204ENST00000341582 2056 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
LYRM1O43325 DTX3-204ENST00000548804 2067 ntAPPRIS P3 TSL 5 BASIC14.78□□□□□ -0.04
LYRM1O43325 SLC44A3-207ENST00000529450 2045 ntTSL 2 BASIC14.78□□□□□ -0.04
LYRM1O43325 CIAPIN1-209ENST00000567518 2016 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
LYRM1O43325 SIGIRR-203ENST00000431843 1720 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
LYRM1O43325 ACBD6-201ENST00000367595 1670 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
LYRM1O43325 PAX4-204ENST00000463946 1613 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
LYRM1O43325 C1RL-210ENST00000544702 1569 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
LYRM1O43325 KIAA1841-201ENST00000295031 3116 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
LYRM1O43325 SERPINF2-203ENST00000450523 1462 ntTSL 2 BASIC14.78□□□□□ -0.04
LYRM1O43325 NFIX-209ENST00000587760 1487 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
LYRM1O43325 MYH14-210ENST00000601313 6896 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
LYRM1O43325 TSTD1-201ENST00000318289 626 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
LYRM1O43325 MRGPRG-201ENST00000332314 870 ntAPPRIS P1 BASIC14.78□□□□□ -0.04
LYRM1O43325 NPM3-201ENST00000370110 877 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
LYRM1O43325 MIR663A-201ENST00000385250 93 ntBASIC14.78□□□□□ -0.04
LYRM1O43325 ZNF436-AS1-202ENST00000437367 606 ntTSL 2 BASIC14.78□□□□□ -0.04
LYRM1O43325 NELFE-206ENST00000444811 1202 ntAPPRIS ALT2 TSL 2 BASIC14.78□□□□□ -0.04
LYRM1O43325 PLEKHB1-216ENST00000543085 632 ntTSL 3 BASIC14.78□□□□□ -0.04
LYRM1O43325 MIR4758-201ENST00000577688 71 ntBASIC14.78□□□□□ -0.04
LYRM1O43325 NEDD4L-225ENST00000589054 1033 ntTSL 3 BASIC14.78□□□□□ -0.04
LYRM1O43325 PPP1R14A-205ENST00000591585 949 ntTSL 2 BASIC14.78□□□□□ -0.04
LYRM1O43325 MTDHP1-201ENST00000605323 784 ntBASIC14.78□□□□□ -0.04
LYRM1O43325 AL031985.4-201ENST00000642138 673 ntBASIC14.78□□□□□ -0.04
LYRM1O43325 TMEM139-201ENST00000359333 2383 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
LYRM1O43325 AC021683.3-202ENST00000592572 4440 ntTSL 5 BASIC14.78□□□□□ -0.04
LYRM1O43325 MYZAP-202ENST00000380565 2181 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
LYRM1O43325 NR2E3-203ENST00000621098 2064 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
LYRM1O43325 OSGIN1-203ENST00000393306 1940 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
LYRM1O43325 CDK1-204ENST00000448257 1948 ntAPPRIS ALT1 TSL 1 (best) BASIC14.78□□□□□ -0.04
LYRM1O43325 TJP2-212ENST00000636438 4689 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
LYRM1O43325 CLDN4-201ENST00000340958 1831 ntAPPRIS P1 BASIC14.78□□□□□ -0.04
LYRM1O43325 WIZ-206ENST00000599686 3644 ntTSL 5 BASIC14.78□□□□□ -0.04
LYRM1O43325 C3orf67-201ENST00000295966 2650 ntTSL 2 BASIC14.78□□□□□ -0.04
LYRM1O43325 CMTM3-203ENST00000460097 1797 ntTSL 2 BASIC14.78□□□□□ -0.04
LYRM1O43325 FNIP1-204ENST00000511848 1720 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
LYRM1O43325 LYPLA1-214ENST00000618741 2526 ntTSL 5 BASIC14.77□□□□□ -0.04
LYRM1O43325 MAP3K13-212ENST00000448876 1681 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
LYRM1O43325 HOGA1-202ENST00000370646 2488 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
LYRM1O43325 FCER2-205ENST00000597921 1560 ntAPPRIS P2 TSL 1 (best) BASIC14.77□□□□□ -0.04
LYRM1O43325 SPOP-201ENST00000347630 2965 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.04
LYRM1O43325 SPAG4-201ENST00000374273 1453 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
LYRM1O43325 CD151-203ENST00000397421 1486 ntAPPRIS P2 TSL 1 (best) BASIC14.77□□□□□ -0.04
LYRM1O43325 SLC6A13-201ENST00000343164 2185 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
LYRM1O43325 SLC6A9-204ENST00000372307 2162 ntTSL 2 BASIC14.77□□□□□ -0.04
LYRM1O43325 SLFNL1-205ENST00000439569 2117 ntAPPRIS P3 TSL 2 BASIC14.77□□□□□ -0.04
LYRM1O43325 MRFAP1-205ENST00000617365 2112 ntTSL 5 BASIC14.77□□□□□ -0.04
LYRM1O43325 DISC1-209ENST00000439617 7059 ntAPPRIS ALT2 TSL 5 BASIC14.77□□□□□ -0.04
LYRM1O43325 ITFG1-201ENST00000320640 3400 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
LYRM1O43325 PDE8B-204ENST00000342343 2677 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.04
LYRM1O43325 TTLL5-219ENST00000556977 1961 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
LYRM1O43325 MAP7D1-203ENST00000373150 3238 ntAPPRIS ALT2 TSL 2 BASIC14.77□□□□□ -0.04
LYRM1O43325 MAP4-202ENST00000360240 5142 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.04
LYRM1O43325 TMEM223-201ENST00000307366 1288 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
LYRM1O43325 CLTA-202ENST00000345519 1073 ntAPPRIS ALT1 TSL 1 (best) BASIC14.77□□□□□ -0.05
LYRM1O43325 MIR638-201ENST00000385237 100 ntBASIC14.77□□□□□ -0.05
LYRM1O43325 AP002982.1-201ENST00000492365 877 ntBASIC14.77□□□□□ -0.05
LYRM1O43325 ZNF706-206ENST00000519744 785 ntTSL 3 BASIC14.77□□□□□ -0.05
LYRM1O43325 SNAP23-210ENST00000564153 775 ntTSL 2 BASIC14.77□□□□□ -0.05
LYRM1O43325 FAM222B-208ENST00000581381 556 ntTSL 4 BASIC14.77□□□□□ -0.05
LYRM1O43325 AL353708.3-201ENST00000610272 989 ntBASIC14.77□□□□□ -0.05
LYRM1O43325 AL032819.3-201ENST00000640283 925 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.05
LYRM1O43325 FAM181A-201ENST00000267594 1816 ntTSL 2 BASIC14.77□□□□□ -0.05
LYRM1O43325 ACHE-202ENST00000302913 2956 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
LYRM1O43325 CORO6-202ENST00000388767 2397 ntAPPRIS P2 TSL 2 BASIC14.77□□□□□ -0.05
LYRM1O43325 RBFOX3-211ENST00000583458 2934 ntAPPRIS ALT2 TSL 5 BASIC14.77□□□□□ -0.05
LYRM1O43325 GRAMD4-203ENST00000408031 2834 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
LYRM1O43325 RBBP8-201ENST00000327155 3288 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
LYRM1O43325 GINS2-201ENST00000253462 2673 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
LYRM1O43325 BCAR1-202ENST00000393420 2667 ntTSL 5 BASIC14.77□□□□□ -0.05
LYRM1O43325 GEM-202ENST00000396194 2103 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
LYRM1O43325 PHLDB1-202ENST00000361417 5753 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.05
LYRM1O43325 STX3-203ENST00000529177 1571 ntTSL 2 BASIC14.77□□□□□ -0.05
LYRM1O43325 LMNA-201ENST00000347559 3137 ntTSL 5 BASIC14.77□□□□□ -0.05
LYRM1O43325 CNOT10-202ENST00000331889 2573 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
LYRM1O43325 PIGT-207ENST00000543458 2037 ntTSL 2 BASIC14.76□□□□□ -0.05
LYRM1O43325 APOPT1-201ENST00000409074 2523 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
LYRM1O43325 AL139300.1-201ENST00000472726 2505 ntAPPRIS P1 TSL 2 BASIC14.76□□□□□ -0.05
LYRM1O43325 COL5A1-201ENST00000371817 8471 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
LYRM1O43325 SALL3-206ENST00000616649 2958 ntTSL 5 BASIC14.76□□□□□ -0.05
LYRM1O43325 ME2P1-201ENST00000426028 1970 ntBASIC14.76□□□□□ -0.05
LYRM1O43325 EPHB4-201ENST00000358173 4329 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
LYRM1O43325 SYTL3-205ENST00000611299 2896 ntAPPRIS ALT1 TSL 5 BASIC14.76□□□□□ -0.05
LYRM1O43325 UNC119-202ENST00000335765 1424 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
LYRM1O43325 KRT16P1-201ENST00000399124 1418 ntBASIC14.76□□□□□ -0.05
LYRM1O43325 ARSI-203ENST00000515301 1429 ntTSL 4 BASIC14.76□□□□□ -0.05
LYRM1O43325 SULT1C4-201ENST00000272452 1860 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
LYRM1O43325 VWA2-202ENST00000392982 2794 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
LYRM1O43325 FGFBP1-201ENST00000382333 1359 ntAPPRIS P1 TSL 3 BASIC14.76□□□□□ -0.05
LYRM1O43325 UROC1-202ENST00000383579 2735 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
LYRM1O43325 TBRG4-203ENST00000395655 2225 ntTSL 2 BASIC14.76□□□□□ -0.05
LYRM1O43325 CLN5-208ENST00000636183 6664 ntAPPRIS P2 TSL 1 (best) BASIC14.76□□□□□ -0.05
LYRM1O43325 EIF2B4-212ENST00000622434 1771 ntTSL 5 BASIC14.76□□□□□ -0.05
LYRM1O43325 KATNAL2-208ENST00000592005 1348 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
LYRM1O43325 SYBU-208ENST00000440310 3072 ntAPPRIS ALT2 TSL 5 BASIC14.76□□□□□ -0.05
LYRM1O43325 ACBD5-201ENST00000375888 1747 ntAPPRIS ALT2 TSL 5 BASIC14.76□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 35.1 ms