Protein–RNA interactions for Protein: O43181

NDUFS4, NADH dehydrogenase [ubiquinone] iron-sulfur protein 4, mitochondrial, humanhuman

Predictions only

Length 175 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFS4O43181 DMRTA2-201ENST00000404795 3137 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.23
NDUFS4O43181 OSBPL1A-204ENST00000399443 3317 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
NDUFS4O43181 TRH-202ENST00000507066 1580 ntAPPRIS ALT1 TSL 5 BASIC16.46■□□□□ 0.23
NDUFS4O43181 LGALS12-201ENST00000255684 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
NDUFS4O43181 KLF3-201ENST00000261438 5122 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
NDUFS4O43181 SELENBP1-201ENST00000368868 1752 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
NDUFS4O43181 LUC7L2-202ENST00000354926 2645 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
NDUFS4O43181 MOB3A-201ENST00000357066 3391 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
NDUFS4O43181 SPDEF-201ENST00000374037 1895 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.22
NDUFS4O43181 SOCS7-201ENST00000612932 7857 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
NDUFS4O43181 TMEM50B-210ENST00000542230 2375 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
NDUFS4O43181 CCM2-207ENST00000475551 2471 ntAPPRIS ALT2 TSL 2 BASIC16.45■□□□□ 0.22
NDUFS4O43181 OR2C3-203ENST00000617752 2481 ntAPPRIS P1 BASIC16.45■□□□□ 0.22
NDUFS4O43181 PCMTD1-206ENST00000521344 1712 ntTSL 3 BASIC16.45■□□□□ 0.22
NDUFS4O43181 HIST1H2BN-204ENST00000612898 1723 ntAPPRIS P1 BASIC16.45■□□□□ 0.22
NDUFS4O43181 RNF121-203ENST00000393713 2132 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
NDUFS4O43181 HDAC10-205ENST00000448072 2133 ntTSL 5 BASIC16.45■□□□□ 0.22
NDUFS4O43181 RPS2P28-201ENST00000314255 741 ntBASIC16.45■□□□□ 0.22
NDUFS4O43181 DNAH14-205ENST00000366850 1103 ntTSL 5 BASIC16.45■□□□□ 0.22
NDUFS4O43181 HLA-DMA-201ENST00000374843 1123 ntAPPRIS P1 BASIC16.45■□□□□ 0.22
NDUFS4O43181 ITM2B-201ENST00000378549 805 ntTSL 5 BASIC16.45■□□□□ 0.22
NDUFS4O43181 MRPL3P1-201ENST00000400109 1033 ntBASIC16.45■□□□□ 0.22
NDUFS4O43181 MCFD2-208ENST00000409973 821 ntAPPRIS P1 TSL 2 BASIC16.45■□□□□ 0.22
NDUFS4O43181 AL645941.2-201ENST00000429234 612 ntAPPRIS P1 TSL 2 BASIC16.45■□□□□ 0.22
NDUFS4O43181 HNRNPDP1-201ENST00000439535 754 ntBASIC16.45■□□□□ 0.22
NDUFS4O43181 AC009078.2-202ENST00000463353 338 ntBASIC16.45■□□□□ 0.22
NDUFS4O43181 CUTA-210ENST00000488034 769 ntAPPRIS ALT1 TSL 2 BASIC16.45■□□□□ 0.22
NDUFS4O43181 AC067930.3-201ENST00000524808 701 ntTSL 3 BASIC16.45■□□□□ 0.22
NDUFS4O43181 AL353135.1-201ENST00000606729 504 ntBASIC16.45■□□□□ 0.22
NDUFS4O43181 ANO2-212ENST00000612575 1087 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
NDUFS4O43181 AC004706.3-202ENST00000621574 984 ntBASIC16.45■□□□□ 0.22
NDUFS4O43181 GFAP-203ENST00000435360 1779 ntTSL 2 BASIC16.45■□□□□ 0.22
NDUFS4O43181 CLEC18A-202ENST00000393701 1955 ntAPPRIS P2 TSL 1 (best) BASIC16.45■□□□□ 0.22
NDUFS4O43181 CLEC18C-203ENST00000541793 1955 ntAPPRIS P2 TSL 1 (best) BASIC16.45■□□□□ 0.22
NDUFS4O43181 SEPHS1-202ENST00000378614 2387 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
NDUFS4O43181 CNOT6-207ENST00000618123 6250 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
NDUFS4O43181 VPS13B-201ENST00000355155 2822 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
NDUFS4O43181 FGFR4-203ENST00000393648 2733 ntAPPRIS ALT2 TSL 2 BASIC16.45■□□□□ 0.22
NDUFS4O43181 CTNNAL1-204ENST00000374595 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
NDUFS4O43181 SLC1A5-205ENST00000594991 2031 ntTSL 2 BASIC16.45■□□□□ 0.22
NDUFS4O43181 ZFP64-205ENST00000371518 1841 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
NDUFS4O43181 CD72-211ENST00000612238 1424 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
NDUFS4O43181 SLCO4A1-202ENST00000370507 2665 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
NDUFS4O43181 SH2D3C-205ENST00000420366 2682 ntTSL 2 BASIC16.44■□□□□ 0.22
NDUFS4O43181 GTDC1-219ENST00000542155 2677 ntAPPRIS P1 TSL 2 BASIC16.44■□□□□ 0.22
NDUFS4O43181 TLE2-219ENST00000591529 2483 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
NDUFS4O43181 SMARCC2-202ENST00000347471 3839 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
NDUFS4O43181 TNXB-204ENST00000479795 2742 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
NDUFS4O43181 ZNF414-202ENST00000393927 2300 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
NDUFS4O43181 PRRT4-205ENST00000489835 2313 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
NDUFS4O43181 GTPBP8-203ENST00000383678 1360 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
NDUFS4O43181 KCNB1-203ENST00000635465 4114 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
NDUFS4O43181 OSBPL9-222ENST00000531828 2210 ntTSL 5 BASIC16.44■□□□□ 0.22
NDUFS4O43181 SMIM29-201ENST00000335352 1160 ntTSL 2 BASIC16.44■□□□□ 0.22
NDUFS4O43181 TRPC2-202ENST00000526541 1189 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
NDUFS4O43181 AL662844.1-201ENST00000546340 181 ntBASIC16.44■□□□□ 0.22
NDUFS4O43181 MAP1LC3B-207ENST00000565788 625 ntTSL 2 BASIC16.44■□□□□ 0.22
NDUFS4O43181 CYGB-205ENST00000590175 830 ntTSL 3 BASIC16.44■□□□□ 0.22
NDUFS4O43181 KLK8-205ENST00000593490 267 ntTSL 3 BASIC16.44■□□□□ 0.22
NDUFS4O43181 AC060834.1-201ENST00000443027 2032 ntBASIC16.44■□□□□ 0.22
NDUFS4O43181 SEMA3B-204ENST00000433753 2755 ntAPPRIS ALT1 TSL 1 (best) BASIC16.44■□□□□ 0.22
NDUFS4O43181 IFFO1-211ENST00000615885 2775 ntTSL 5 BASIC16.44■□□□□ 0.22
NDUFS4O43181 WRAP53-203ENST00000431639 1818 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
NDUFS4O43181 WRAP53-204ENST00000457584 1828 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
NDUFS4O43181 SMARCA4-215ENST00000590574 5282 ntAPPRIS ALT1 TSL 5 BASIC16.44■□□□□ 0.22
NDUFS4O43181 MAPT-205ENST00000351559 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
NDUFS4O43181 ITGB2-AS1-202ENST00000441379 2282 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
NDUFS4O43181 CLDN11-201ENST00000064724 2169 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
NDUFS4O43181 PRSS36-207ENST00000569305 2723 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
NDUFS4O43181 AC005920.1-201ENST00000501718 2054 ntTSL 2 BASIC16.44■□□□□ 0.22
NDUFS4O43181 MYO1B-202ENST00000339514 5026 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
NDUFS4O43181 ZNF302-202ENST00000446502 2635 ntAPPRIS ALT2 TSL 2 BASIC16.44■□□□□ 0.22
NDUFS4O43181 RSBN1-205ENST00000615321 2418 ntTSL 2 BASIC16.44■□□□□ 0.22
NDUFS4O43181 PTHLH-203ENST00000395872 1318 ntAPPRIS ALT1 TSL 5 BASIC16.44■□□□□ 0.22
NDUFS4O43181 AP1S2-201ENST00000329235 2237 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
NDUFS4O43181 SELENBP1-204ENST00000426705 1928 ntTSL 2 BASIC16.43■□□□□ 0.22
NDUFS4O43181 TRAF2-201ENST00000247668 2264 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
NDUFS4O43181 ASIC2-201ENST00000225823 3443 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
NDUFS4O43181 C18orf8-201ENST00000269221 2162 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
NDUFS4O43181 RGS11-203ENST00000359740 1371 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
NDUFS4O43181 PHYH-202ENST00000396913 1732 ntTSL 5 BASIC16.43■□□□□ 0.22
NDUFS4O43181 TBXAS1-210ENST00000458722 2057 ntTSL 2 BASIC16.43■□□□□ 0.22
NDUFS4O43181 GPD2-201ENST00000310454 6041 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
NDUFS4O43181 DBI-201ENST00000311521 714 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
NDUFS4O43181 NFKBIB-202ENST00000392079 991 ntTSL 5 BASIC16.43■□□□□ 0.22
NDUFS4O43181 RAB24-204ENST00000393611 1236 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
NDUFS4O43181 NABP1-203ENST00000409510 843 ntTSL 5 BASIC16.43■□□□□ 0.22
NDUFS4O43181 AL031284.1-201ENST00000419297 478 ntBASIC16.43■□□□□ 0.22
NDUFS4O43181 HFE-210ENST00000470149 1123 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
NDUFS4O43181 PPIE-208ENST00000470213 927 ntTSL 3 BASIC16.43■□□□□ 0.22
NDUFS4O43181 EEF1D-238ENST00000531621 840 ntTSL 3 BASIC16.43■□□□□ 0.22
NDUFS4O43181 SLC25A6P4-201ENST00000586535 553 ntBASIC16.43■□□□□ 0.22
NDUFS4O43181 AC008735.5-201ENST00000623544 497 ntBASIC16.43■□□□□ 0.22
NDUFS4O43181 FAM215A-202ENST00000632077 792 ntBASIC16.43■□□□□ 0.22
NDUFS4O43181 LIN28B-AS1-205ENST00000637414 879 ntTSL 5 BASIC16.43■□□□□ 0.22
NDUFS4O43181 ASB1-201ENST00000264607 6994 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
NDUFS4O43181 TBC1D2B-201ENST00000300584 6067 ntAPPRIS ALT2 TSL 5 BASIC16.43■□□□□ 0.22
NDUFS4O43181 RWDD4-202ENST00000327570 2590 ntAPPRIS ALT1 TSL 3 BASIC16.43■□□□□ 0.22
NDUFS4O43181 HLA-A-204ENST00000396634 1868 ntAPPRIS P1 BASIC16.43■□□□□ 0.22
NDUFS4O43181 GMPPA-204ENST00000373908 1501 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 37 ms