Protein–RNA interactions for Protein: E9PIF3

NPIPA2, Nuclear pore complex-interacting protein family member A2, humanhuman

Predictions only

Length 369 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA2E9PIF3 C6orf226-201ENST00000408925 552 ntAPPRIS P1 BASIC15.66■□□□□ 0.1
NPIPA2E9PIF3 CRYGEP-201ENST00000412192 528 ntBASIC15.66■□□□□ 0.1
NPIPA2E9PIF3 UPF3AP3-201ENST00000420996 769 ntBASIC15.66■□□□□ 0.1
NPIPA2E9PIF3 RPS15P9-201ENST00000494093 319 ntBASIC15.66■□□□□ 0.1
NPIPA2E9PIF3 LMX1B-203ENST00000526117 1195 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
NPIPA2E9PIF3 AC135050.2-203ENST00000529564 725 ntAPPRIS P1 TSL 4 BASIC15.66■□□□□ 0.1
NPIPA2E9PIF3 AP005233.2-201ENST00000561588 372 ntTSL 3 BASIC15.66■□□□□ 0.1
NPIPA2E9PIF3 ZFPM1-203ENST00000562437 502 ntTSL 2 BASIC15.66■□□□□ 0.1
NPIPA2E9PIF3 AC087645.2-201ENST00000586321 799 ntTSL 3 BASIC15.66■□□□□ 0.1
NPIPA2E9PIF3 AC008992.1-201ENST00000591132 446 ntTSL 2 BASIC15.66■□□□□ 0.1
NPIPA2E9PIF3 AL590235.2-202ENST00000602543 594 ntTSL 5 BASIC15.66■□□□□ 0.1
NPIPA2E9PIF3 ACYP2-209ENST00000607452 831 ntTSL 2 BASIC15.66■□□□□ 0.1
NPIPA2E9PIF3 SREK1-216ENST00000612404 2128 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
NPIPA2E9PIF3 AL691403.2-201ENST00000618460 490 ntBASIC15.66■□□□□ 0.1
NPIPA2E9PIF3 TMEM198-201ENST00000344458 2393 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
NPIPA2E9PIF3 TMEM145-201ENST00000301204 1768 ntAPPRIS P2 TSL 2 BASIC15.66■□□□□ 0.1
NPIPA2E9PIF3 SUZ12-201ENST00000322652 4491 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
NPIPA2E9PIF3 SCN3B-202ENST00000392770 6061 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
NPIPA2E9PIF3 AC104809.2-201ENST00000418218 2274 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
NPIPA2E9PIF3 C19orf54-203ENST00000470681 2521 ntTSL 2 BASIC15.66■□□□□ 0.1
NPIPA2E9PIF3 CYBA-210ENST00000569359 1415 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
NPIPA2E9PIF3 COQ9-201ENST00000262507 1677 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
NPIPA2E9PIF3 ACYP2-203ENST00000406041 1913 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
NPIPA2E9PIF3 SLC27A2-202ENST00000380902 2181 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
NPIPA2E9PIF3 FAM69C-201ENST00000343998 3671 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
NPIPA2E9PIF3 STUM-201ENST00000366788 7705 ntAPPRIS P2 TSL 5 BASIC15.66■□□□□ 0.1
NPIPA2E9PIF3 SOD2-215ENST00000546087 2558 ntTSL 2 BASIC15.66■□□□□ 0.1
NPIPA2E9PIF3 KRT79-201ENST00000330553 2068 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
NPIPA2E9PIF3 TRH-202ENST00000507066 1580 ntAPPRIS ALT1 TSL 5 BASIC15.66■□□□□ 0.1
NPIPA2E9PIF3 NEO1-201ENST00000261908 7088 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
NPIPA2E9PIF3 HOXC6-201ENST00000243108 1733 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
NPIPA2E9PIF3 MDFIC-201ENST00000257724 4598 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
NPIPA2E9PIF3 ZNF48-206ENST00000622647 2695 ntTSL 4 BASIC15.65■□□□□ 0.1
NPIPA2E9PIF3 NPAS3-202ENST00000356141 2802 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
NPIPA2E9PIF3 SEPT4-201ENST00000317256 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
NPIPA2E9PIF3 RBBP7-203ENST00000380087 2333 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
NPIPA2E9PIF3 KCNC2-203ENST00000393288 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
NPIPA2E9PIF3 KRT28-201ENST00000306658 1685 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
NPIPA2E9PIF3 MRPS16-201ENST00000372940 866 ntTSL 2 BASIC15.65■□□□□ 0.1
NPIPA2E9PIF3 CST3-201ENST00000376925 873 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
NPIPA2E9PIF3 PMP22-202ENST00000395936 816 ntTSL 3 BASIC15.65■□□□□ 0.1
NPIPA2E9PIF3 ZGLP1-201ENST00000403352 1028 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
NPIPA2E9PIF3 WWOX-204ENST00000408984 1227 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
NPIPA2E9PIF3 AL049569.1-201ENST00000446261 636 ntTSL 3 BASIC15.65■□□□□ 0.1
NPIPA2E9PIF3 DNAJB3-201ENST00000446806 729 ntBASIC15.65■□□□□ 0.1
NPIPA2E9PIF3 AC012363.1-201ENST00000455707 575 ntTSL 4 BASIC15.65■□□□□ 0.1
NPIPA2E9PIF3 AC108073.2-201ENST00000464002 357 ntBASIC15.65■□□□□ 0.1
NPIPA2E9PIF3 IDH3B-206ENST00000474315 1279 ntAPPRIS ALT1 TSL 1 (best) BASIC15.65■□□□□ 0.1
NPIPA2E9PIF3 TRMT112-202ENST00000535126 704 ntTSL 2 BASIC15.65■□□□□ 0.1
NPIPA2E9PIF3 BLOC1S6-202ENST00000562384 494 ntTSL 4 BASIC15.65■□□□□ 0.1
NPIPA2E9PIF3 AC002347.1-201ENST00000569543 541 ntBASIC15.65■□□□□ 0.1
NPIPA2E9PIF3 AC008403.2-204ENST00000600650 1006 ntTSL 3 BASIC15.65■□□□□ 0.1
NPIPA2E9PIF3 AC243773.2-203ENST00000612281 640 ntTSL 3 BASIC15.65■□□□□ 0.1
NPIPA2E9PIF3 AC055717.3-201ENST00000622967 595 ntBASIC15.65■□□□□ 0.1
NPIPA2E9PIF3 CR381653.1-203ENST00000625153 577 ntTSL 5 BASIC15.65■□□□□ 0.1
NPIPA2E9PIF3 AL662799.1-201ENST00000630418 496 ntTSL 5 BASIC15.65■□□□□ 0.1
NPIPA2E9PIF3 GYG1-214ENST00000627418 1831 ntTSL 5 BASIC15.65■□□□□ 0.1
NPIPA2E9PIF3 MAGI1-213ENST00000483466 4791 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
NPIPA2E9PIF3 F11R-206ENST00000621309 4770 ntTSL 5 BASIC15.65■□□□□ 0.1
NPIPA2E9PIF3 TFAP2B-202ENST00000393655 5773 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
NPIPA2E9PIF3 C14orf180-202ENST00000410013 2009 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
NPIPA2E9PIF3 UBE2D2-202ENST00000398733 2702 ntAPPRIS P2 TSL 1 (best) BASIC15.65■□□□□ 0.1
NPIPA2E9PIF3 KCNB1-203ENST00000635465 4114 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
NPIPA2E9PIF3 PARP15-202ENST00000464300 2156 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
NPIPA2E9PIF3 GPX3-209ENST00000614343 1478 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
NPIPA2E9PIF3 NFS1-202ENST00000374085 2645 ntTSL 2 BASIC15.64■□□□□ 0.1
NPIPA2E9PIF3 RRM2B-201ENST00000251810 4931 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
NPIPA2E9PIF3 RAB3IP-202ENST00000362025 2055 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
NPIPA2E9PIF3 RUNX2-204ENST00000371438 5698 ntAPPRIS P4 TSL 5 BASIC15.64■□□□□ 0.09
NPIPA2E9PIF3 ZBTB16-201ENST00000335953 2523 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
NPIPA2E9PIF3 FST-202ENST00000396947 2538 ntTSL 5 BASIC15.64■□□□□ 0.09
NPIPA2E9PIF3 PIF1-201ENST00000268043 2687 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
NPIPA2E9PIF3 IRF5-210ENST00000477535 1374 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
NPIPA2E9PIF3 NAT6-205ENST00000443842 1820 ntAPPRIS ALT2 TSL 2 BASIC15.64■□□□□ 0.09
NPIPA2E9PIF3 NLGN2-201ENST00000302926 4642 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
NPIPA2E9PIF3 FGFR4-202ENST00000393637 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
NPIPA2E9PIF3 ZNF500-202ENST00000545009 2440 ntTSL 2 BASIC15.64■□□□□ 0.09
NPIPA2E9PIF3 CCDC91-220ENST00000545336 2738 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
NPIPA2E9PIF3 MFSD11-220ENST00000621483 2850 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
NPIPA2E9PIF3 PDE8B-201ENST00000264917 5956 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
NPIPA2E9PIF3 EMILIN3-201ENST00000332312 3796 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
NPIPA2E9PIF3 TRIM9-201ENST00000298355 5284 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
NPIPA2E9PIF3 ELOF1-201ENST00000252445 1019 ntAPPRIS P1 TSL 2 BASIC15.64■□□□□ 0.09
NPIPA2E9PIF3 ZNF74-201ENST00000357502 2788 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
NPIPA2E9PIF3 PAXX-201ENST00000371620 812 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
NPIPA2E9PIF3 PFDN6-201ENST00000374606 740 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
NPIPA2E9PIF3 RPSAP43-201ENST00000402237 625 ntBASIC15.64■□□□□ 0.09
NPIPA2E9PIF3 GNB2-205ENST00000419828 1285 ntTSL 5 BASIC15.64■□□□□ 0.09
NPIPA2E9PIF3 GPX1P2-201ENST00000429271 606 ntBASIC15.64■□□□□ 0.09
NPIPA2E9PIF3 BARX1-AS1-202ENST00000454594 307 ntTSL 3 BASIC15.64■□□□□ 0.09
NPIPA2E9PIF3 LINC00237-202ENST00000455890 1220 ntTSL 2 BASIC15.64■□□□□ 0.09
NPIPA2E9PIF3 EFCAB1-209ENST00000523092 648 ntTSL 2 BASIC15.64■□□□□ 0.09
NPIPA2E9PIF3 AC116612.1-201ENST00000557144 562 ntTSL 3 BASIC15.64■□□□□ 0.09
NPIPA2E9PIF3 NUTF2-206ENST00000569436 1119 ntAPPRIS P1 TSL 2 BASIC15.64■□□□□ 0.09
NPIPA2E9PIF3 CRB3-204ENST00000600229 1078 ntAPPRIS ALT2 TSL 2 BASIC15.64■□□□□ 0.09
NPIPA2E9PIF3 AC074135.2-201ENST00000600896 510 ntTSL 3 BASIC15.64■□□□□ 0.09
NPIPA2E9PIF3 CHAC1-204ENST00000617768 1560 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
NPIPA2E9PIF3 HOTTIP_1.1-201ENST00000620415 57 ntBASIC15.64■□□□□ 0.09
NPIPA2E9PIF3 AL138688.1-201ENST00000624851 1594 ntBASIC15.64■□□□□ 0.09
NPIPA2E9PIF3 YY1AP1-206ENST00000359205 2690 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 28.2 ms