Protein–RNA interactions for Protein: C9JG80

NPIPB4, Nuclear pore complex-interacting protein family member B4, humanhuman

Predictions only

Length 1,138 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB4C9JG80 AL805961.1-202ENST00000641562 540 ntBASIC15.17■□□□□ 0.02
NPIPB4C9JG80 PROSER2-201ENST00000277570 3333 ntAPPRIS P2 TSL 1 (best) BASIC15.17■□□□□ 0.02
NPIPB4C9JG80 CCDC184-201ENST00000316554 2343 ntAPPRIS P1 BASIC15.17■□□□□ 0.02
NPIPB4C9JG80 TBC1D2-202ENST00000375063 2100 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
NPIPB4C9JG80 TTC24-201ENST00000368236 2005 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
NPIPB4C9JG80 MPP1-202ENST00000369534 2042 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
NPIPB4C9JG80 RBBP7-204ENST00000404022 1904 ntTSL 5 BASIC15.17■□□□□ 0.02
NPIPB4C9JG80 PTPRU-202ENST00000373779 5579 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
NPIPB4C9JG80 MEF2A-204ENST00000557785 2854 ntAPPRIS ALT1 TSL 5 BASIC15.17■□□□□ 0.02
NPIPB4C9JG80 HNRNPLL-202ENST00000358367 2779 ntTSL 5 BASIC15.17■□□□□ 0.02
NPIPB4C9JG80 FAM120AOS-201ENST00000375412 2771 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
NPIPB4C9JG80 MAP3K8-207ENST00000542547 2782 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
NPIPB4C9JG80 CA9-201ENST00000378357 1618 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
NPIPB4C9JG80 CBSL-202ENST00000617706 2563 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
NPIPB4C9JG80 EYA2-201ENST00000317304 1540 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
NPIPB4C9JG80 CD244-203ENST00000368034 2463 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
NPIPB4C9JG80 SLC52A1-201ENST00000254853 2377 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
NPIPB4C9JG80 PDPK2P-201ENST00000382326 2387 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
NPIPB4C9JG80 SNTG2-202ENST00000407292 1436 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
NPIPB4C9JG80 PGRMC2-208ENST00000613358 3783 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
NPIPB4C9JG80 CNTNAP3-205ENST00000377659 2649 ntTSL 2 BASIC15.16■□□□□ 0.02
NPIPB4C9JG80 MATN3-201ENST00000407540 2524 ntAPPRIS P2 TSL 1 (best) BASIC15.16■□□□□ 0.02
NPIPB4C9JG80 CTD-3080P12.3-203ENST00000514376 1757 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
NPIPB4C9JG80 SLC2A5-201ENST00000377414 2344 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
NPIPB4C9JG80 INPP5J-213ENST00000620191 2306 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
NPIPB4C9JG80 OSBPL9-222ENST00000531828 2210 ntTSL 5 BASIC15.16■□□□□ 0.02
NPIPB4C9JG80 ADNP2-201ENST00000262198 5393 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
NPIPB4C9JG80 CDH24-204ENST00000487137 3438 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
NPIPB4C9JG80 TEX264-215ENST00000611400 1488 ntAPPRIS P3 TSL 5 BASIC15.16■□□□□ 0.02
NPIPB4C9JG80 HNRNPD-201ENST00000313899 3033 ntAPPRIS P4 TSL 1 (best) BASIC15.16■□□□□ 0.02
NPIPB4C9JG80 TOP3BP1-201ENST00000420768 1380 ntBASIC15.16■□□□□ 0.02
NPIPB4C9JG80 TLE3-205ENST00000539550 2464 ntTSL 2 BASIC15.16■□□□□ 0.02
NPIPB4C9JG80 RPRD1A-209ENST00000590898 1945 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
NPIPB4C9JG80 CAP2-202ENST00000378990 1812 ntTSL 2 BASIC15.16■□□□□ 0.02
NPIPB4C9JG80 NDUFA11-201ENST00000308961 539 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
NPIPB4C9JG80 SLX1A-202ENST00000345535 762 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
NPIPB4C9JG80 SLX1B-202ENST00000351581 762 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
NPIPB4C9JG80 AL355310.2-201ENST00000369843 688 ntTSL 3 BASIC15.16■□□□□ 0.02
NPIPB4C9JG80 HIST2H3DP1-201ENST00000401004 416 ntBASIC15.16■□□□□ 0.02
NPIPB4C9JG80 CYCS-202ENST00000409409 974 ntAPPRIS P1 TSL 3 BASIC15.16■□□□□ 0.02
NPIPB4C9JG80 DYNC1LI2-202ENST00000440564 1145 ntTSL 2 BASIC15.16■□□□□ 0.02
NPIPB4C9JG80 MRPL2-208ENST00000489623 570 ntTSL 2 BASIC15.16■□□□□ 0.02
NPIPB4C9JG80 ABO-202ENST00000538324 1147 ntAPPRIS P5 TSL 5 BASIC15.16■□□□□ 0.02
NPIPB4C9JG80 CLEC4GP1-201ENST00000596555 870 ntBASIC15.16■□□□□ 0.02
NPIPB4C9JG80 SSBP1-215ENST00000612337 884 ntAPPRIS P1 TSL 2 BASIC15.16■□□□□ 0.02
NPIPB4C9JG80 SMIM22-210ENST00000615471 928 ntAPPRIS ALT2 TSL 3 BASIC15.16■□□□□ 0.02
NPIPB4C9JG80 TMEM265-201ENST00000615541 995 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
NPIPB4C9JG80 CEACAM3-208ENST00000630848 1110 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
NPIPB4C9JG80 AC107918.4-202ENST00000641623 219 ntBASIC15.16■□□□□ 0.02
NPIPB4C9JG80 RGL3-202ENST00000393423 2278 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
NPIPB4C9JG80 DFNA5-207ENST00000419307 2265 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
NPIPB4C9JG80 ITGA6-201ENST00000264107 5618 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
NPIPB4C9JG80 STK25-201ENST00000316586 4619 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
NPIPB4C9JG80 PKLR-201ENST00000342741 2083 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
NPIPB4C9JG80 NDFIP1-201ENST00000253814 3851 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
NPIPB4C9JG80 AL365277.1-202ENST00000331856 2241 ntTSL 2 BASIC15.16■□□□□ 0.02
NPIPB4C9JG80 PHKG1-205ENST00000452681 2226 ntTSL 2 BASIC15.16■□□□□ 0.02
NPIPB4C9JG80 EML3-201ENST00000278845 3017 ntAPPRIS ALT1 TSL 5 BASIC15.16■□□□□ 0.02
NPIPB4C9JG80 TMEM155-202ENST00000394394 1753 ntAPPRIS P2 TSL 3 BASIC15.16■□□□□ 0.02
NPIPB4C9JG80 TMEM216-201ENST00000334888 1306 ntAPPRIS ALT2 TSL 2 BASIC15.16■□□□□ 0.02
NPIPB4C9JG80 C2CD3-213ENST00000539061 2722 ntTSL 2 BASIC15.16■□□□□ 0.02
NPIPB4C9JG80 SKIDA1-202ENST00000449193 6598 ntAPPRIS P2 TSL 3 BASIC15.15■□□□□ 0.02
NPIPB4C9JG80 FAM66C-209ENST00000544214 2623 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
NPIPB4C9JG80 AL357673.1-201ENST00000637610 2542 ntAPPRIS P5 TSL 5 BASIC15.15■□□□□ 0.02
NPIPB4C9JG80 TMEM138-201ENST00000278826 1848 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
NPIPB4C9JG80 CFAP77-201ENST00000343036 1818 ntAPPRIS P3 TSL 2 BASIC15.15■□□□□ 0.02
NPIPB4C9JG80 TCF4-201ENST00000354452 3482 ntAPPRIS ALT1 TSL 5 BASIC15.15■□□□□ 0.02
NPIPB4C9JG80 ZSCAN18-201ENST00000240727 2779 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
NPIPB4C9JG80 EIF4A3-201ENST00000269349 1734 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
NPIPB4C9JG80 TMEM177-201ENST00000272521 1394 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
NPIPB4C9JG80 DUS3L-202ENST00000320699 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
NPIPB4C9JG80 LRRC38-201ENST00000376085 2209 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
NPIPB4C9JG80 ANKIB1-201ENST00000265742 6081 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
NPIPB4C9JG80 ASL-201ENST00000304874 2143 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
NPIPB4C9JG80 SGF29-201ENST00000317058 1153 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
NPIPB4C9JG80 INSL3-201ENST00000317306 755 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
NPIPB4C9JG80 OPN1LW-201ENST00000369951 1261 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
NPIPB4C9JG80 RAB17-203ENST00000409576 466 ntTSL 3 BASIC15.15■□□□□ 0.02
NPIPB4C9JG80 MYCNOS-201ENST00000419083 770 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
NPIPB4C9JG80 RAP1B-229ENST00000543393 874 ntTSL 3 BASIC15.15■□□□□ 0.02
NPIPB4C9JG80 TSR2-201ENST00000375151 1534 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
NPIPB4C9JG80 SPAG1-201ENST00000251809 3748 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
NPIPB4C9JG80 PCDH7-206ENST00000543491 4457 ntAPPRIS ALT2 BASIC15.15■□□□□ 0.02
NPIPB4C9JG80 TMED3-203ENST00000536821 2265 ntTSL 2 BASIC15.15■□□□□ 0.02
NPIPB4C9JG80 TNFAIP3-207ENST00000614035 1430 ntTSL 5 BASIC15.15■□□□□ 0.02
NPIPB4C9JG80 PTGES3-201ENST00000262033 1920 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
NPIPB4C9JG80 CACNA1A-227ENST00000636549 6792 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
NPIPB4C9JG80 ZYG11A-203ENST00000612017 3682 ntTSL 5 BASIC15.15■□□□□ 0.02
NPIPB4C9JG80 STK10-201ENST00000176763 6060 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
NPIPB4C9JG80 OSBPL1A-204ENST00000399443 3317 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
NPIPB4C9JG80 GPS1-228ENST00000624957 1825 ntAPPRIS ALT1 TSL 5 BASIC15.15■□□□□ 0.02
NPIPB4C9JG80 PBX2-201ENST00000375050 3205 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
NPIPB4C9JG80 DKFZP434K028-202ENST00000536405 2466 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
NPIPB4C9JG80 FLJ38576-201ENST00000623820 2459 ntBASIC15.15■□□□□ 0.02
NPIPB4C9JG80 BAG5-202ENST00000337322 1960 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
NPIPB4C9JG80 YTHDF3-215ENST00000621957 2387 ntAPPRIS ALT1 TSL 5 BASIC15.14■□□□□ 0.01
NPIPB4C9JG80 AL645728.1-201ENST00000366221 2101 ntBASIC15.14■□□□□ 0.01
NPIPB4C9JG80 SPIDR-227ENST00000541342 3311 ntAPPRIS ALT2 TSL 2 BASIC15.14■□□□□ 0.01
NPIPB4C9JG80 TRIM27-201ENST00000377194 2686 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
NPIPB4C9JG80 SYT15-201ENST00000374321 1369 ntAPPRIS P4 TSL 2 BASIC15.14■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 58.6 ms