Protein–RNA interactions for Protein: A6NNA2

SRRM3, Serine/arginine repetitive matrix protein 3, humanhuman

Predicted RBP Predictions only

Length 597 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM3A6NNA2 CCNL2-203ENST00000408952 1857 ntTSL 5 BASIC17.83■□□□□ 0.44
SRRM3A6NNA2 PRDM5-202ENST00000394435 2492 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
SRRM3A6NNA2 MGAT1-201ENST00000307826 2761 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
SRRM3A6NNA2 ADAM15-205ENST00000360674 2732 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.44
SRRM3A6NNA2 GTF2H1-203ENST00000453096 2707 ntAPPRIS P1 TSL 2 BASIC17.83■□□□□ 0.44
SRRM3A6NNA2 EWSR1-203ENST00000332050 2552 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
SRRM3A6NNA2 ICAM3-205ENST00000589261 2024 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
SRRM3A6NNA2 CDC25C-207ENST00000513970 1968 ntAPPRIS P1 TSL 2 BASIC17.82■□□□□ 0.44
SRRM3A6NNA2 LRRC29-201ENST00000393992 1468 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
SRRM3A6NNA2 RDH13-223ENST00000610356 1931 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
SRRM3A6NNA2 REXO1L11P-201ENST00000620964 1927 ntBASIC17.82■□□□□ 0.44
SRRM3A6NNA2 TCF25-202ENST00000263347 2377 ntTSL 5 BASIC17.82■□□□□ 0.44
SRRM3A6NNA2 TCP10-201ENST00000366827 2250 ntAPPRIS ALT2 TSL 5 BASIC17.82■□□□□ 0.44
SRRM3A6NNA2 CTDP1-201ENST00000075430 3538 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
SRRM3A6NNA2 EPN1-203ENST00000411543 2621 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
SRRM3A6NNA2 ELP5-202ENST00000356683 2197 ntTSL 5 BASIC17.82■□□□□ 0.44
SRRM3A6NNA2 PCED1A-201ENST00000356872 1706 ntTSL 2 BASIC17.82■□□□□ 0.44
SRRM3A6NNA2 SBSPON-201ENST00000297354 3801 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
SRRM3A6NNA2 MRPL43-203ENST00000318364 1010 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
SRRM3A6NNA2 MRPL43-204ENST00000342071 894 ntTSL 5 BASIC17.82■□□□□ 0.44
SRRM3A6NNA2 RPS8P6-201ENST00000426177 609 ntBASIC17.82■□□□□ 0.44
SRRM3A6NNA2 HTR5BP-201ENST00000430851 1154 ntBASIC17.82■□□□□ 0.44
SRRM3A6NNA2 AC007364.1-201ENST00000449714 1022 ntTSL 2 BASIC17.82■□□□□ 0.44
SRRM3A6NNA2 PGAM5P1-201ENST00000518923 814 ntBASIC17.82■□□□□ 0.44
SRRM3A6NNA2 RPL18-208ENST00000549920 1004 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
SRRM3A6NNA2 RPL18-209ENST00000550645 463 ntTSL 5 BASIC17.82■□□□□ 0.44
SRRM3A6NNA2 RPL18-214ENST00000552588 559 ntTSL 3 BASIC17.82■□□□□ 0.44
SRRM3A6NNA2 AC092338.2-202ENST00000567158 611 ntTSL 5 BASIC17.82■□□□□ 0.44
SRRM3A6NNA2 DCTPP1-203ENST00000567983 801 ntTSL 5 BASIC17.82■□□□□ 0.44
SRRM3A6NNA2 GMIP-204ENST00000587238 2987 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
SRRM3A6NNA2 AL022328.4-201ENST00000608025 1001 ntTSL 2 BASIC17.82■□□□□ 0.44
SRRM3A6NNA2 MED16-213ENST00000616387 1078 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
SRRM3A6NNA2 FBXO21-201ENST00000330622 2906 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
SRRM3A6NNA2 POLR3E-202ENST00000359210 2469 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
SRRM3A6NNA2 TLE2-202ENST00000426948 2406 ntTSL 5 BASIC17.82■□□□□ 0.44
SRRM3A6NNA2 KCNA5-201ENST00000252321 2800 ntAPPRIS P1 BASIC17.82■□□□□ 0.44
SRRM3A6NNA2 BTC-201ENST00000395743 2816 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
SRRM3A6NNA2 ATXN2-227ENST00000616825 4575 ntAPPRIS ALT2 TSL 5 BASIC17.82■□□□□ 0.44
SRRM3A6NNA2 ELOA3-201ENST00000330682 1877 ntAPPRIS P1 BASIC17.82■□□□□ 0.44
SRRM3A6NNA2 NR1H2-202ENST00000411902 1466 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
SRRM3A6NNA2 RASSF7-205ENST00000454668 1450 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
SRRM3A6NNA2 TTLL11-201ENST00000321582 3250 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
SRRM3A6NNA2 RNF31-201ENST00000324103 3627 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
SRRM3A6NNA2 PDX1-201ENST00000381033 2501 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
SRRM3A6NNA2 PELI3-209ENST00000618547 2508 ntTSL 2 BASIC17.81■□□□□ 0.44
SRRM3A6NNA2 DNM2-203ENST00000389253 3581 ntTSL 5 BASIC17.81■□□□□ 0.44
SRRM3A6NNA2 AC074389.1-201ENST00000382528 1423 ntTSL 2 BASIC17.81■□□□□ 0.44
SRRM3A6NNA2 SPATA6L-207ENST00000475086 1444 ntAPPRIS P1 TSL 2 BASIC17.81■□□□□ 0.44
SRRM3A6NNA2 HPN-202ENST00000392226 1783 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
SRRM3A6NNA2 AC243591.1-201ENST00000452967 1364 ntBASIC17.81■□□□□ 0.44
SRRM3A6NNA2 FAM178B-204ENST00000490605 2710 ntAPPRIS ALT2 TSL 5 BASIC17.81■□□□□ 0.44
SRRM3A6NNA2 SERPINB6-208ENST00000616722 2047 ntTSL 2 BASIC17.81■□□□□ 0.44
SRRM3A6NNA2 PANK4-201ENST00000378466 2677 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
SRRM3A6NNA2 ILVBL-201ENST00000263383 2304 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
SRRM3A6NNA2 TRIM36-202ENST00000379617 1322 ntTSL 2 BASIC17.81■□□□□ 0.44
SRRM3A6NNA2 SLC12A5-209ENST00000616201 2955 ntTSL 5 BASIC17.81■□□□□ 0.44
SRRM3A6NNA2 CRY2-211ENST00000616080 1936 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
SRRM3A6NNA2 HBA2-201ENST00000251595 605 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
SRRM3A6NNA2 HLA-F-217ENST00000334668 1283 ntAPPRIS ALT2 BASIC17.81■□□□□ 0.44
SRRM3A6NNA2 BUB3-202ENST00000368859 667 ntTSL 3 BASIC17.81■□□□□ 0.44
SRRM3A6NNA2 NT5E-202ENST00000369646 974 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
SRRM3A6NNA2 MED22-202ENST00000371999 987 ntTSL 3 BASIC17.81■□□□□ 0.44
SRRM3A6NNA2 ISG15-201ENST00000379389 711 ntAPPRIS P2 TSL 1 (best) BASIC17.81■□□□□ 0.44
SRRM3A6NNA2 CDKN1C-201ENST00000380725 1220 ntAPPRIS ALT2 TSL 2 BASIC17.81■□□□□ 0.44
SRRM3A6NNA2 IGF2-206ENST00000418738 934 ntAPPRIS P2 TSL 1 (best) BASIC17.81■□□□□ 0.44
SRRM3A6NNA2 UPF3AP3-201ENST00000420996 769 ntBASIC17.81■□□□□ 0.44
SRRM3A6NNA2 HLA-F-220ENST00000434407 884 ntBASIC17.81■□□□□ 0.44
SRRM3A6NNA2 AC079848.1-202ENST00000507924 444 ntTSL 3 BASIC17.81■□□□□ 0.44
SRRM3A6NNA2 NDUFB9-204ENST00000518008 789 ntTSL 2 BASIC17.81■□□□□ 0.44
SRRM3A6NNA2 AC025259.3-201ENST00000564531 542 ntTSL 3 BASIC17.81■□□□□ 0.44
SRRM3A6NNA2 AC007220.1-201ENST00000572466 1055 ntTSL 3 BASIC17.81■□□□□ 0.44
SRRM3A6NNA2 ANAPC11-210ENST00000574924 722 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
SRRM3A6NNA2 AC024243.1-201ENST00000609234 778 ntBASIC17.81■□□□□ 0.44
SRRM3A6NNA2 H2BFWT-202ENST00000611083 528 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
SRRM3A6NNA2 DNAAF4-202ENST00000348518 1897 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
SRRM3A6NNA2 OSBPL1A-203ENST00000399441 1887 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
SRRM3A6NNA2 DMRTA1-201ENST00000325870 5569 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
SRRM3A6NNA2 GGT2-202ENST00000405188 1845 ntTSL 5 BASIC17.81■□□□□ 0.44
SRRM3A6NNA2 MAPK7-201ENST00000299612 2715 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
SRRM3A6NNA2 PDE12-202ENST00000487257 3040 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
SRRM3A6NNA2 EPHX2-201ENST00000380476 2064 ntTSL 2 BASIC17.81■□□□□ 0.44
SRRM3A6NNA2 MRPL3-202ENST00000425847 1457 ntTSL 2 BASIC17.81■□□□□ 0.44
SRRM3A6NNA2 SPATA20-202ENST00000356488 2634 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
SRRM3A6NNA2 F12-201ENST00000253496 2049 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
SRRM3A6NNA2 SSH3-201ENST00000308127 2871 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
SRRM3A6NNA2 ARID3C-201ENST00000378909 1411 ntAPPRIS P1 TSL 2 BASIC17.81■□□□□ 0.44
SRRM3A6NNA2 C6orf203-202ENST00000405204 1420 ntAPPRIS P1 TSL 2 BASIC17.81■□□□□ 0.44
SRRM3A6NNA2 CDK10-208ENST00000505473 1424 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
SRRM3A6NNA2 F11R-202ENST00000368026 4835 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
SRRM3A6NNA2 PRODH-202ENST00000334029 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
SRRM3A6NNA2 OGG1-206ENST00000349503 1950 ntTSL 5 BASIC17.8■□□□□ 0.44
SRRM3A6NNA2 PTP4A1-201ENST00000370651 5088 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
SRRM3A6NNA2 NOMO2-211ENST00000621364 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
SRRM3A6NNA2 FAM72C-201ENST00000369175 1658 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
SRRM3A6NNA2 CELF6-204ENST00000543764 1676 ntTSL 2 BASIC17.8■□□□□ 0.44
SRRM3A6NNA2 ZNF259P1-201ENST00000407656 1365 ntBASIC17.8■□□□□ 0.44
SRRM3A6NNA2 AKR1A1-214ENST00000621846 1360 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
SRRM3A6NNA2 GSKIP-207ENST00000556095 3834 ntAPPRIS P1 TSL 2 BASIC17.8■□□□□ 0.44
SRRM3A6NNA2 LRP11-201ENST00000239367 3260 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
SRRM3A6NNA2 RAB43-201ENST00000315150 4467 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 28.8 ms