Protein–RNA interactions for Protein: A2VCL2

CCDC162P, Coiled-coil domain-containing protein 162, humanhuman

Predictions only

Length 907 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC162PA2VCL2 OVOL1-203ENST00000532448 1774 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
CCDC162PA2VCL2 TBC1D2-202ENST00000375063 2100 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
CCDC162PA2VCL2 EIF4A1-203ENST00000577269 1319 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
CCDC162PA2VCL2 PTPN21-208ENST00000556564 6166 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CCDC162PA2VCL2 LTBR-207ENST00000539925 1665 ntAPPRIS ALT2 TSL 2 BASIC17.2■□□□□ 0.34
CCDC162PA2VCL2 SYT15-202ENST00000374323 6428 ntTSL 2 BASIC17.2■□□□□ 0.34
CCDC162PA2VCL2 SNRK-204ENST00000454177 2961 ntAPPRIS P1 TSL 2 BASIC17.19■□□□□ 0.34
CCDC162PA2VCL2 HMCN2-204ENST00000611173 1920 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
CCDC162PA2VCL2 NCAPH2-203ENST00000395701 2077 ntTSL 2 BASIC17.19■□□□□ 0.34
CCDC162PA2VCL2 ADM5-201ENST00000420022 1718 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CCDC162PA2VCL2 FAM135A-209ENST00000505769 4806 ntTSL 5 BASIC17.19■□□□□ 0.34
CCDC162PA2VCL2 PAN3-AS1-201ENST00000563843 1351 ntBASIC17.19■□□□□ 0.34
CCDC162PA2VCL2 DPEP1-203ENST00000421184 1647 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
CCDC162PA2VCL2 ARFRP1-212ENST00000618838 1623 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
CCDC162PA2VCL2 ADCYAP1R1-203ENST00000409363 1889 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
CCDC162PA2VCL2 GOSR2-201ENST00000225567 1245 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
CCDC162PA2VCL2 MIR202HG-201ENST00000300167 384 ntTSL 2 BASIC17.19■□□□□ 0.34
CCDC162PA2VCL2 MCRIP2-201ENST00000307650 946 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CCDC162PA2VCL2 IFNGR1-201ENST00000367739 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CCDC162PA2VCL2 RPUSD3-201ENST00000383820 1225 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CCDC162PA2VCL2 EEF1E1-202ENST00000429723 562 ntTSL 3 BASIC17.19■□□□□ 0.34
CCDC162PA2VCL2 TM4SF19-TCTEX1D2-201ENST00000442633 964 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CCDC162PA2VCL2 CHCHD3-203ENST00000448878 1038 ntTSL 5 BASIC17.19■□□□□ 0.34
CCDC162PA2VCL2 UNC93B7-201ENST00000509439 705 ntBASIC17.19■□□□□ 0.34
CCDC162PA2VCL2 GPHA2-202ENST00000532246 466 ntTSL 3 BASIC17.19■□□□□ 0.34
CCDC162PA2VCL2 MTUS2-205ENST00000542829 1165 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
CCDC162PA2VCL2 AC092725.1-201ENST00000565783 499 ntTSL 4 BASIC17.19■□□□□ 0.34
CCDC162PA2VCL2 MRPL21-208ENST00000567045 932 ntTSL 2 BASIC17.19■□□□□ 0.34
CCDC162PA2VCL2 AC135776.2-201ENST00000567803 714 ntTSL 4 BASIC17.19■□□□□ 0.34
CCDC162PA2VCL2 IFNL4P1-201ENST00000607083 540 ntBASIC17.19■□□□□ 0.34
CCDC162PA2VCL2 AL139288.1-201ENST00000623748 933 ntBASIC17.19■□□□□ 0.34
CCDC162PA2VCL2 AL022326.1-202ENST00000641533 845 ntBASIC17.19■□□□□ 0.34
CCDC162PA2VCL2 SQOR-208ENST00000568606 1792 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
CCDC162PA2VCL2 RNF187-201ENST00000305943 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
CCDC162PA2VCL2 RPH3AL-222ENST00000618002 2578 ntAPPRIS P2 TSL 5 BASIC17.19■□□□□ 0.34
CCDC162PA2VCL2 STX3-203ENST00000529177 1571 ntTSL 2 BASIC17.19■□□□□ 0.34
CCDC162PA2VCL2 ESM1-201ENST00000381403 1326 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
CCDC162PA2VCL2 CPT2-210ENST00000637252 2739 ntTSL 5 BASIC17.19■□□□□ 0.34
CCDC162PA2VCL2 MEGF9-201ENST00000373930 6298 ntAPPRIS P1 TSL 2 BASIC17.19■□□□□ 0.34
CCDC162PA2VCL2 GPD2-201ENST00000310454 6041 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CCDC162PA2VCL2 ZNF773-201ENST00000282292 2206 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
CCDC162PA2VCL2 SPIN3-224ENST00000639583 2245 ntTSL 5 BASIC17.19■□□□□ 0.34
CCDC162PA2VCL2 MCF2L-208ENST00000397030 6580 ntTSL 2 BASIC17.18■□□□□ 0.34
CCDC162PA2VCL2 AFMID-201ENST00000327898 1700 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
CCDC162PA2VCL2 HIST1H2BN-204ENST00000612898 1723 ntAPPRIS P1 BASIC17.18■□□□□ 0.34
CCDC162PA2VCL2 RASSF5-205ENST00000581503 5586 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
CCDC162PA2VCL2 GPR89P-201ENST00000407924 1495 ntBASIC17.18■□□□□ 0.34
CCDC162PA2VCL2 UNC13A-206ENST00000552293 5314 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
CCDC162PA2VCL2 GDF5-201ENST00000374369 2383 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
CCDC162PA2VCL2 RARA-206ENST00000425707 3041 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
CCDC162PA2VCL2 AC016757.1-205ENST00000470346 1888 ntTSL 2 BASIC17.18■□□□□ 0.34
CCDC162PA2VCL2 AC092068.3-201ENST00000587894 2016 ntBASIC17.18■□□□□ 0.34
CCDC162PA2VCL2 MAP3K6-201ENST00000357582 4136 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
CCDC162PA2VCL2 LSP1-203ENST00000405957 1785 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
CCDC162PA2VCL2 AL109955.1-201ENST00000417346 1540 ntTSL 2 BASIC17.18■□□□□ 0.34
CCDC162PA2VCL2 AL590627.1-201ENST00000626603 1910 ntTSL 2 BASIC17.18■□□□□ 0.34
CCDC162PA2VCL2 NOMO2-211ENST00000621364 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
CCDC162PA2VCL2 CDC25A-202ENST00000351231 3663 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
CCDC162PA2VCL2 IPPK-202ENST00000375522 882 ntTSL 3 BASIC17.18■□□□□ 0.34
CCDC162PA2VCL2 SMIM11A-202ENST00000399295 1074 ntAPPRIS P1 TSL 2 BASIC17.18■□□□□ 0.34
CCDC162PA2VCL2 AF238378.1-201ENST00000526806 358 ntBASIC17.18■□□□□ 0.34
CCDC162PA2VCL2 SART3-203ENST00000546611 1184 ntBASIC17.18■□□□□ 0.34
CCDC162PA2VCL2 LINC01711-201ENST00000598340 967 ntBASIC17.18■□□□□ 0.34
CCDC162PA2VCL2 AC022150.1-201ENST00000599222 640 ntTSL 3 BASIC17.18■□□□□ 0.34
CCDC162PA2VCL2 AC064862.7-201ENST00000604520 867 ntBASIC17.18■□□□□ 0.34
CCDC162PA2VCL2 SMN2-213ENST00000614240 804 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
CCDC162PA2VCL2 CHST13-202ENST00000615522 1146 ntTSL 5 BASIC17.18■□□□□ 0.34
CCDC162PA2VCL2 SMIM11B-207ENST00000624758 1074 ntAPPRIS P1 TSL 2 BASIC17.18■□□□□ 0.34
CCDC162PA2VCL2 ALOX12-201ENST00000251535 2358 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
CCDC162PA2VCL2 AZIN2-203ENST00000373441 1443 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
CCDC162PA2VCL2 PCDHA8-202ENST00000531613 5260 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.34
CCDC162PA2VCL2 FRMD4A-203ENST00000357447 6821 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.34
CCDC162PA2VCL2 SLC39A13-202ENST00000362021 2296 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
CCDC162PA2VCL2 ISPD-201ENST00000399310 1709 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
CCDC162PA2VCL2 C10orf111-201ENST00000624760 1714 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
CCDC162PA2VCL2 HRAT92-201ENST00000452622 3506 ntTSL 2 BASIC17.18■□□□□ 0.34
CCDC162PA2VCL2 LYPLAL1-202ENST00000366928 1898 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
CCDC162PA2VCL2 CFL1-203ENST00000525451 1878 ntAPPRIS P1 TSL 2 BASIC17.18■□□□□ 0.34
CCDC162PA2VCL2 ATXN2-201ENST00000377617 4702 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
CCDC162PA2VCL2 ZDHHC20-209ENST00000542645 5315 ntAPPRIS ALT2 TSL 2 BASIC17.17■□□□□ 0.34
CCDC162PA2VCL2 LEF1-201ENST00000265165 3068 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
CCDC162PA2VCL2 PRR18-201ENST00000322583 3084 ntAPPRIS P2 BASIC17.17■□□□□ 0.34
CCDC162PA2VCL2 OSBPL9-222ENST00000531828 2210 ntTSL 5 BASIC17.17■□□□□ 0.34
CCDC162PA2VCL2 KLHDC7B-201ENST00000395676 2991 ntAPPRIS P1 BASIC17.17■□□□□ 0.34
CCDC162PA2VCL2 FRMD8P1-201ENST00000440433 1524 ntBASIC17.17■□□□□ 0.34
CCDC162PA2VCL2 AC068888.1-203ENST00000546566 1650 ntTSL 2 BASIC17.17■□□□□ 0.34
CCDC162PA2VCL2 ABCB9-207ENST00000442833 2587 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
CCDC162PA2VCL2 SLC22A3-201ENST00000275300 3348 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
CCDC162PA2VCL2 MTHFD1L-211ENST00000611279 3475 ntAPPRIS ALT1 TSL 5 BASIC17.17■□□□□ 0.34
CCDC162PA2VCL2 TLCD1-201ENST00000292090 1017 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
CCDC162PA2VCL2 ZNF81-201ENST00000334937 610 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
CCDC162PA2VCL2 SMOX-204ENST00000346595 982 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
CCDC162PA2VCL2 UBE2C-206ENST00000405520 641 ntTSL 2 BASIC17.17■□□□□ 0.34
CCDC162PA2VCL2 AC099684.1-202ENST00000425277 1747 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
CCDC162PA2VCL2 MAGI2-AS3-208ENST00000446159 670 ntTSL 3 BASIC17.17■□□□□ 0.34
CCDC162PA2VCL2 SAPCD2P3-201ENST00000455031 850 ntBASIC17.17■□□□□ 0.34
CCDC162PA2VCL2 MRPL2-208ENST00000489623 570 ntTSL 2 BASIC17.17■□□□□ 0.34
CCDC162PA2VCL2 AC097372.2-201ENST00000510996 732 ntTSL 3 BASIC17.17■□□□□ 0.34
CCDC162PA2VCL2 AC124947.2-201ENST00000547118 1133 ntBASIC17.17■□□□□ 0.34
CCDC162PA2VCL2 SMAD3-210ENST00000559092 584 ntTSL 4 BASIC17.17■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 25.9 ms