Protein–RNA interactions for Protein: A0A1B0GX56

TRDV1, T-cell receptor delta variable 1 (Fragment), humanhuman

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRDV1A0A1B0GX56 PGAP3-201ENST00000300658 2737 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
TRDV1A0A1B0GX56 TMEM222-201ENST00000374076 1599 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
TRDV1A0A1B0GX56 IRF7-207ENST00000525445 1588 ntTSL 5 BASIC15.12■□□□□ 0.01
TRDV1A0A1B0GX56 AC004233.2-201ENST00000573315 2062 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
TRDV1A0A1B0GX56 KRT2-201ENST00000309680 2403 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
TRDV1A0A1B0GX56 PTGES3-201ENST00000262033 1920 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
TRDV1A0A1B0GX56 PPT2-246ENST00000375137 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
TRDV1A0A1B0GX56 MGME1-202ENST00000377709 1936 ntTSL 2 BASIC15.12■□□□□ 0.01
TRDV1A0A1B0GX56 PPHLN1-213ENST00000549190 1777 ntTSL 5 BASIC15.12■□□□□ 0.01
TRDV1A0A1B0GX56 GUK1-201ENST00000312726 1084 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
TRDV1A0A1B0GX56 ERICH4-201ENST00000378187 946 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
TRDV1A0A1B0GX56 MCHR1-202ENST00000381433 1219 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
TRDV1A0A1B0GX56 TSPY8-202ENST00000383000 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
TRDV1A0A1B0GX56 TSPY8-203ENST00000383005 435 ntTSL 5 BASIC15.12■□□□□ 0.01
TRDV1A0A1B0GX56 HSPB7-204ENST00000411503 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC15.12■□□□□ 0.01
TRDV1A0A1B0GX56 AL731557.1-201ENST00000425264 744 ntTSL 3 BASIC15.12■□□□□ 0.01
TRDV1A0A1B0GX56 SIGLEC10-205ENST00000439889 2126 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
TRDV1A0A1B0GX56 FAM131A-208ENST00000453072 1038 ntTSL 2 BASIC15.12■□□□□ 0.01
TRDV1A0A1B0GX56 RNASEK-203ENST00000549393 783 ntTSL 3 BASIC15.12■□□□□ 0.01
TRDV1A0A1B0GX56 AC109462.3-201ENST00000573934 613 ntBASIC15.12■□□□□ 0.01
TRDV1A0A1B0GX56 MIEF2-207ENST00000578621 540 ntTSL 4 BASIC15.12■□□□□ 0.01
TRDV1A0A1B0GX56 CIRBP-235ENST00000591935 746 ntAPPRIS ALT1 TSL 3 BASIC15.12■□□□□ 0.01
TRDV1A0A1B0GX56 SMAGP-204ENST00000603838 816 ntTSL 2 BASIC15.12■□□□□ 0.01
TRDV1A0A1B0GX56 AL024498.1-202ENST00000606652 480 ntTSL 2 BASIC15.12■□□□□ 0.01
TRDV1A0A1B0GX56 ANKRD20A8P-203ENST00000641373 517 ntBASIC15.12■□□□□ 0.01
TRDV1A0A1B0GX56 JPH4-202ENST00000397118 4386 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
TRDV1A0A1B0GX56 RELT-201ENST00000064780 3535 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
TRDV1A0A1B0GX56 TPD52L2-209ENST00000611972 2197 ntTSL 3 BASIC15.12■□□□□ 0.01
TRDV1A0A1B0GX56 AC097376.2-201ENST00000608661 2510 ntTSL 5 BASIC15.12■□□□□ 0.01
TRDV1A0A1B0GX56 EGFR-203ENST00000344576 2864 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
TRDV1A0A1B0GX56 PLAGL1-211ENST00000625622 3216 ntAPPRIS P1 TSL 2 BASIC15.12■□□□□ 0.01
TRDV1A0A1B0GX56 CDKN2AIP-203ENST00000504169 2721 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
TRDV1A0A1B0GX56 BLK-205ENST00000529894 2017 ntTSL 5 BASIC15.12■□□□□ 0.01
TRDV1A0A1B0GX56 TRMT44-205ENST00000513449 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
TRDV1A0A1B0GX56 TUBB8P12-201ENST00000308911 1335 ntBASIC15.12■□□□□ 0.01
TRDV1A0A1B0GX56 TUBB7P-202ENST00000428444 1305 ntBASIC15.12■□□□□ 0.01
TRDV1A0A1B0GX56 TUBB8P7-204ENST00000567960 1332 ntBASIC15.12■□□□□ 0.01
TRDV1A0A1B0GX56 FTSJ1-202ENST00000348411 1892 ntAPPRIS P4 TSL 1 (best) BASIC15.12■□□□□ 0.01
TRDV1A0A1B0GX56 VILL-207ENST00000465644 1857 ntTSL 5 BASIC15.12■□□□□ 0.01
TRDV1A0A1B0GX56 MGEA5-203ENST00000370094 3314 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
TRDV1A0A1B0GX56 GATA4-206ENST00000528712 2614 ntTSL 2 BASIC15.12■□□□□ 0.01
TRDV1A0A1B0GX56 APH1A-204ENST00000414276 1718 ntTSL 2 BASIC15.12■□□□□ 0.01
TRDV1A0A1B0GX56 LFNG-205ENST00000402506 2268 ntTSL 2 BASIC15.12■□□□□ 0.01
TRDV1A0A1B0GX56 RIMS1-210ENST00000491071 5047 ntTSL 5 BASIC15.11■□□□□ 0.01
TRDV1A0A1B0GX56 CCDC8-201ENST00000307522 3213 ntAPPRIS P1 BASIC15.11■□□□□ 0.01
TRDV1A0A1B0GX56 KLK5-201ENST00000336334 1563 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
TRDV1A0A1B0GX56 AC141586.1-201ENST00000399702 2748 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
TRDV1A0A1B0GX56 TPD52L2-201ENST00000217121 2362 ntTSL 2 BASIC15.11■□□□□ 0.01
TRDV1A0A1B0GX56 HYAL3-205ENST00000450982 1402 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
TRDV1A0A1B0GX56 GHDC-207ENST00000587427 2396 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
TRDV1A0A1B0GX56 CENPT-215ENST00000564817 1638 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
TRDV1A0A1B0GX56 RUFY2-205ENST00000454950 2613 ntTSL 2 BASIC15.11■□□□□ 0.01
TRDV1A0A1B0GX56 SUSD4-204ENST00000366878 3025 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
TRDV1A0A1B0GX56 STAC-201ENST00000273183 3227 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
TRDV1A0A1B0GX56 BID-202ENST00000342111 854 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
TRDV1A0A1B0GX56 GUCA2A-201ENST00000357001 569 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
TRDV1A0A1B0GX56 SZT2-202ENST00000372450 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
TRDV1A0A1B0GX56 KRT18P48-201ENST00000434763 852 ntBASIC15.11■□□□□ 0.01
TRDV1A0A1B0GX56 AC068472.1-201ENST00000474589 881 ntBASIC15.11■□□□□ 0.01
TRDV1A0A1B0GX56 PACRGL-207ENST00000502938 810 ntTSL 4 BASIC15.11■□□□□ 0.01
TRDV1A0A1B0GX56 H1FX-AS1-204ENST00000511998 917 ntTSL 5 BASIC15.11■□□□□ 0.01
TRDV1A0A1B0GX56 AC090192.1-201ENST00000517740 490 ntBASIC15.11■□□□□ 0.01
TRDV1A0A1B0GX56 CERNA3-201ENST00000521403 557 ntTSL 3 BASIC15.11■□□□□ 0.01
TRDV1A0A1B0GX56 RAB2A-211ENST00000531289 1058 ntTSL 2 BASIC15.11■□□□□ 0.01
TRDV1A0A1B0GX56 EGLN1P1-201ENST00000531623 762 ntBASIC15.11■□□□□ 0.01
TRDV1A0A1B0GX56 PDCD5-207ENST00000590247 699 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
TRDV1A0A1B0GX56 MIMT1-202ENST00000599641 1290 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
TRDV1A0A1B0GX56 CADM1-222ENST00000616271 1246 ntTSL 5 BASIC15.11■□□□□ 0.01
TRDV1A0A1B0GX56 RNF187-203ENST00000639044 708 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
TRDV1A0A1B0GX56 GPR89P-201ENST00000407924 1495 ntBASIC15.11■□□□□ 0.01
TRDV1A0A1B0GX56 TLX2-204ENST00000621092 1452 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
TRDV1A0A1B0GX56 MAPKAP1-206ENST00000373511 3252 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
TRDV1A0A1B0GX56 PURB-201ENST00000395699 9069 ntAPPRIS P1 BASIC15.11■□□□□ 0.01
TRDV1A0A1B0GX56 MLLT6-210ENST00000620609 2714 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
TRDV1A0A1B0GX56 SMIM24-201ENST00000215531 1329 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
TRDV1A0A1B0GX56 ULBP2-201ENST00000367351 1349 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
TRDV1A0A1B0GX56 CCDC120-203ENST00000536628 2381 ntAPPRIS ALT2 TSL 2 BASIC15.11■□□□□ 0.01
TRDV1A0A1B0GX56 PICALM-204ENST00000526033 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC15.11■□□□□ 0.01
TRDV1A0A1B0GX56 CCDC40-201ENST00000269318 1970 ntTSL 2 BASIC15.11■□□□□ 0.01
TRDV1A0A1B0GX56 SLFNL1-201ENST00000302946 1951 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
TRDV1A0A1B0GX56 LYAR-201ENST00000343470 1569 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
TRDV1A0A1B0GX56 SLC27A4-202ENST00000372870 1557 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
TRDV1A0A1B0GX56 HSD11B1L-223ENST00000616276 1580 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
TRDV1A0A1B0GX56 TMC4-209ENST00000617472 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
TRDV1A0A1B0GX56 RNF182-206ENST00000537388 3274 ntAPPRIS P1 TSL 2 BASIC15.11■□□□□ 0.01
TRDV1A0A1B0GX56 NFASC-205ENST00000403080 2462 ntTSL 2 BASIC15.1■□□□□ 0.01
TRDV1A0A1B0GX56 SIGLEC10-201ENST00000339313 2256 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
TRDV1A0A1B0GX56 TGIF1-205ENST00000401449 1670 ntTSL 2 BASIC15.1■□□□□ 0.01
TRDV1A0A1B0GX56 CTIF-201ENST00000256413 5750 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
TRDV1A0A1B0GX56 TRIM13-206ENST00000457662 1489 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
TRDV1A0A1B0GX56 CASZ1-202ENST00000377022 7936 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
TRDV1A0A1B0GX56 MYCBPAP-203ENST00000436259 3102 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
TRDV1A0A1B0GX56 DGUOK-201ENST00000264093 1144 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
TRDV1A0A1B0GX56 NTAN1-201ENST00000287706 1204 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
TRDV1A0A1B0GX56 FAM212A-201ENST00000333323 1040 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
TRDV1A0A1B0GX56 CCK-201ENST00000334681 830 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
TRDV1A0A1B0GX56 DGUOK-202ENST00000348222 880 ntTSL 2 BASIC15.1■□□□□ 0.01
TRDV1A0A1B0GX56 NUDT8-202ENST00000376693 728 ntAPPRIS ALT2 TSL 2 BASIC15.1■□□□□ 0.01
TRDV1A0A1B0GX56 AP000523.1-201ENST00000398242 1049 ntBASIC15.1■□□□□ 0.01
TRDV1A0A1B0GX56 KRTAP5-3-201ENST00000399685 899 ntAPPRIS P1 BASIC15.1■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 53.6 ms