Protein–RNA interactions for Protein: A0A140T963

RNF103-CHMP3, RNF103-CHMP3 readthrough (Fragment), humanhuman

Predictions only

Length 221 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF103-CHMP3A0A140T963 FAM181A-203ENST00000556222 1162 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
RNF103-CHMP3A0A140T963 IFI27L2-206ENST00000556727 556 ntTSL 3 BASIC16.61■□□□□ 0.25
RNF103-CHMP3A0A140T963 CRNDE-210ENST00000560912 459 ntTSL 5 BASIC16.61■□□□□ 0.25
RNF103-CHMP3A0A140T963 DFFB-212ENST00000625756 649 ntTSL 5 BASIC16.61■□□□□ 0.25
RNF103-CHMP3A0A140T963 WDR6-223ENST00000627177 207 ntTSL 2 BASIC16.61■□□□□ 0.25
RNF103-CHMP3A0A140T963 OR4D1-202ENST00000641449 4925 ntAPPRIS P1 BASIC16.61■□□□□ 0.25
RNF103-CHMP3A0A140T963 SRCIN1-215ENST00000621492 4644 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
RNF103-CHMP3A0A140T963 CCDC120-202ENST00000496529 2415 ntAPPRIS P3 TSL 2 BASIC16.61■□□□□ 0.25
RNF103-CHMP3A0A140T963 XRCC3-209ENST00000554913 2539 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
RNF103-CHMP3A0A140T963 BSCL2-201ENST00000278893 1364 ntAPPRIS ALT2 TSL 2 BASIC16.61■□□□□ 0.25
RNF103-CHMP3A0A140T963 CLEC4G-201ENST00000328853 1360 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
RNF103-CHMP3A0A140T963 UPP1-203ENST00000395564 1375 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
RNF103-CHMP3A0A140T963 CHEK2-202ENST00000348295 1771 ntTSL 5 BASIC16.61■□□□□ 0.25
RNF103-CHMP3A0A140T963 GRK6-202ENST00000355958 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC16.61■□□□□ 0.25
RNF103-CHMP3A0A140T963 SQOR-208ENST00000568606 1792 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
RNF103-CHMP3A0A140T963 SACS-AS1-201ENST00000443092 2234 ntTSL 2 BASIC16.61■□□□□ 0.25
RNF103-CHMP3A0A140T963 ABR-203ENST00000536794 2213 ntTSL 2 BASIC16.61■□□□□ 0.25
RNF103-CHMP3A0A140T963 VGLL4-210ENST00000426568 1428 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
RNF103-CHMP3A0A140T963 MYH14-210ENST00000601313 6896 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
RNF103-CHMP3A0A140T963 MAP2K5-202ENST00000340972 1491 ntTSL 2 BASIC16.61■□□□□ 0.25
RNF103-CHMP3A0A140T963 PCDHGC3-205ENST00000617641 2346 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
RNF103-CHMP3A0A140T963 TGDS-201ENST00000261296 1905 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
RNF103-CHMP3A0A140T963 PRKX-201ENST00000262848 6031 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
RNF103-CHMP3A0A140T963 KLK5-201ENST00000336334 1563 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
RNF103-CHMP3A0A140T963 ASXL1-210ENST00000613218 7038 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
RNF103-CHMP3A0A140T963 PPP1R16B-202ENST00000373331 6106 ntTSL 5 BASIC16.6■□□□□ 0.25
RNF103-CHMP3A0A140T963 ALK-201ENST00000389048 6220 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
RNF103-CHMP3A0A140T963 BBS5-201ENST00000295240 3475 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
RNF103-CHMP3A0A140T963 PLAUR-201ENST00000221264 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
RNF103-CHMP3A0A140T963 NSFL1C-202ENST00000353088 2611 ntTSL 2 BASIC16.6■□□□□ 0.25
RNF103-CHMP3A0A140T963 FOXRED2-203ENST00000397223 2184 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
RNF103-CHMP3A0A140T963 ARL5B-201ENST00000377275 7196 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
RNF103-CHMP3A0A140T963 PLPPR2-201ENST00000251473 2727 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
RNF103-CHMP3A0A140T963 RABAC1-201ENST00000222008 821 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
RNF103-CHMP3A0A140T963 ZNF414-201ENST00000255616 1178 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
RNF103-CHMP3A0A140T963 METTL21C-201ENST00000267273 1088 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
RNF103-CHMP3A0A140T963 RPA2-201ENST00000313433 1237 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
RNF103-CHMP3A0A140T963 EDARADD-201ENST00000334232 858 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
RNF103-CHMP3A0A140T963 PLCB1-204ENST00000404098 1260 ntTSL 3 BASIC16.6■□□□□ 0.25
RNF103-CHMP3A0A140T963 AC103564.1-201ENST00000437330 562 ntTSL 5 BASIC16.6■□□□□ 0.25
RNF103-CHMP3A0A140T963 AP001625.2-201ENST00000442605 575 ntTSL 2 BASIC16.6■□□□□ 0.25
RNF103-CHMP3A0A140T963 FNDC5-205ENST00000496770 837 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
RNF103-CHMP3A0A140T963 RNF126P1-202ENST00000569893 925 ntBASIC16.6■□□□□ 0.25
RNF103-CHMP3A0A140T963 SPAG7-207ENST00000575142 1094 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
RNF103-CHMP3A0A140T963 ELAVL1-202ENST00000593807 856 ntTSL 3 BASIC16.6■□□□□ 0.25
RNF103-CHMP3A0A140T963 RABAC1-208ENST00000601078 728 ntTSL 3 BASIC16.6■□□□□ 0.25
RNF103-CHMP3A0A140T963 PLXDC2-202ENST00000377242 2822 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
RNF103-CHMP3A0A140T963 LYPLA2-205ENST00000374514 1810 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
RNF103-CHMP3A0A140T963 PITPNA-201ENST00000313486 3912 ntAPPRIS P2 TSL 5 BASIC16.6■□□□□ 0.25
RNF103-CHMP3A0A140T963 KCNJ8-201ENST00000240662 2389 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
RNF103-CHMP3A0A140T963 ZACN-201ENST00000334586 1335 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
RNF103-CHMP3A0A140T963 FOXP1-218ENST00000498215 2400 ntAPPRIS P3 TSL 2 BASIC16.6■□□□□ 0.25
RNF103-CHMP3A0A140T963 VARS2-212ENST00000542001 4064 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
RNF103-CHMP3A0A140T963 IDS-202ENST00000370441 1399 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
RNF103-CHMP3A0A140T963 CTSB-228ENST00000533455 2009 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
RNF103-CHMP3A0A140T963 CD151-203ENST00000397421 1486 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
RNF103-CHMP3A0A140T963 BAGE2-202ENST00000474011 1482 ntTSL 2 BASIC16.6■□□□□ 0.25
RNF103-CHMP3A0A140T963 HNRNPA3-201ENST00000392524 2067 ntAPPRIS P3 TSL 5 BASIC16.6■□□□□ 0.25
RNF103-CHMP3A0A140T963 PUS1-208ENST00000542167 2151 ntTSL 5 BASIC16.6■□□□□ 0.25
RNF103-CHMP3A0A140T963 AL353608.3-201ENST00000603200 2211 ntTSL 5 BASIC16.6■□□□□ 0.25
RNF103-CHMP3A0A140T963 WT1-209ENST00000530998 2421 ntTSL 2 BASIC16.59■□□□□ 0.25
RNF103-CHMP3A0A140T963 CNP-201ENST00000393888 2583 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
RNF103-CHMP3A0A140T963 HYMAI-201ENST00000635591 3347 ntBASIC16.59■□□□□ 0.25
RNF103-CHMP3A0A140T963 LAT2-201ENST00000275635 1869 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
RNF103-CHMP3A0A140T963 SLITRK4-201ENST00000338017 3357 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
RNF103-CHMP3A0A140T963 NGFR-201ENST00000172229 3417 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
RNF103-CHMP3A0A140T963 MYB-242ENST00000618728 3545 ntTSL 5 BASIC16.59■□□□□ 0.25
RNF103-CHMP3A0A140T963 SHISA6-204ENST00000441885 7575 ntAPPRIS P3 TSL 5 BASIC16.59■□□□□ 0.25
RNF103-CHMP3A0A140T963 DTX3-204ENST00000548804 2067 ntAPPRIS P3 TSL 5 BASIC16.59■□□□□ 0.25
RNF103-CHMP3A0A140T963 TGFBR2-201ENST00000295754 4621 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
RNF103-CHMP3A0A140T963 BAALC-202ENST00000306391 243 ntTSL 5 BASIC16.59■□□□□ 0.25
RNF103-CHMP3A0A140T963 HRAS-201ENST00000311189 894 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
RNF103-CHMP3A0A140T963 BAALC-204ENST00000330955 222 ntTSL 5 BASIC16.59■□□□□ 0.25
RNF103-CHMP3A0A140T963 MIEN1-201ENST00000394231 1006 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
RNF103-CHMP3A0A140T963 VKORC1-205ENST00000394975 1012 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
RNF103-CHMP3A0A140T963 LBX1-AS1-203ENST00000454527 740 ntTSL 5 BASIC16.59■□□□□ 0.25
RNF103-CHMP3A0A140T963 AC063952.2-201ENST00000498792 1227 ntBASIC16.59■□□□□ 0.25
RNF103-CHMP3A0A140T963 AC008610.1-201ENST00000504573 393 ntTSL 2 BASIC16.59■□□□□ 0.25
RNF103-CHMP3A0A140T963 IFI27L1-206ENST00000554562 571 ntTSL 3 BASIC16.59■□□□□ 0.25
RNF103-CHMP3A0A140T963 MIMT1-202ENST00000599641 1290 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
RNF103-CHMP3A0A140T963 AC083849.1-201ENST00000615227 514 ntBASIC16.59■□□□□ 0.25
RNF103-CHMP3A0A140T963 EML2-AS1-203ENST00000623430 886 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
RNF103-CHMP3A0A140T963 FUK-207ENST00000571514 3054 ntTSL 2 BASIC16.59■□□□□ 0.25
RNF103-CHMP3A0A140T963 UBC-206ENST00000538617 1303 ntTSL 5 BASIC16.59■□□□□ 0.25
RNF103-CHMP3A0A140T963 LIMS2-208ENST00000410011 2335 ntAPPRIS ALT1 TSL 1 (best) BASIC16.59■□□□□ 0.25
RNF103-CHMP3A0A140T963 ACE-204ENST00000428043 5120 ntTSL 2 BASIC16.59■□□□□ 0.25
RNF103-CHMP3A0A140T963 LINC01105-206ENST00000456327 1434 ntTSL 5 BASIC16.59■□□□□ 0.25
RNF103-CHMP3A0A140T963 CSNK1A1L-201ENST00000379800 2406 ntAPPRIS P1 BASIC16.59■□□□□ 0.25
RNF103-CHMP3A0A140T963 FAM131B-206ENST00000443739 4382 ntAPPRIS ALT1 TSL 1 (best) BASIC16.59■□□□□ 0.25
RNF103-CHMP3A0A140T963 LRRC29-201ENST00000393992 1468 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
RNF103-CHMP3A0A140T963 PDE4C-201ENST00000262805 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
RNF103-CHMP3A0A140T963 SLC22A12-205ENST00000473690 2522 ntTSL 2 BASIC16.59■□□□□ 0.25
RNF103-CHMP3A0A140T963 EVPL-201ENST00000301607 6614 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
RNF103-CHMP3A0A140T963 PCDH19-202ENST00000373034 9756 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
RNF103-CHMP3A0A140T963 ATP2A3-205ENST00000397041 4675 ntAPPRIS P4 TSL 1 (best) BASIC16.59■□□□□ 0.25
RNF103-CHMP3A0A140T963 SSBP3-203ENST00000371319 1578 ntAPPRIS ALT1 TSL 2 BASIC16.59■□□□□ 0.25
RNF103-CHMP3A0A140T963 SLCO5A1-203ENST00000524945 3725 ntTSL 2 BASIC16.59■□□□□ 0.25
RNF103-CHMP3A0A140T963 AMOTL2-211ENST00000513145 2653 ntAPPRIS ALT1 TSL 1 (best) BASIC16.59■□□□□ 0.25
RNF103-CHMP3A0A140T963 SLC25A22-201ENST00000320230 2796 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
RNF103-CHMP3A0A140T963 PTPN13-204ENST00000436978 8573 ntAPPRIS P4 TSL 5 BASIC16.59■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 30.1 ms