Protein–RNA interactions for Protein: A0A0A0MS03

TRBV5-3, T-cell receptor beta variable 5-3 (non-functional) (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV5-3A0A0A0MS03 DEF6-201ENST00000316637 2262 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
TRBV5-3A0A0A0MS03 OSBPL9-222ENST00000531828 2210 ntTSL 5 BASIC16.06■□□□□ 0.16
TRBV5-3A0A0A0MS03 NUCB1-202ENST00000407032 2158 ntAPPRIS P2 TSL 5 BASIC16.06■□□□□ 0.16
TRBV5-3A0A0A0MS03 DNAH14-206ENST00000400952 1984 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
TRBV5-3A0A0A0MS03 ME2P1-201ENST00000426028 1970 ntBASIC16.06■□□□□ 0.16
TRBV5-3A0A0A0MS03 GPS1-228ENST00000624957 1825 ntAPPRIS ALT1 TSL 5 BASIC16.06■□□□□ 0.16
TRBV5-3A0A0A0MS03 WDR90-209ENST00000547944 1672 ntTSL 2 BASIC16.06■□□□□ 0.16
TRBV5-3A0A0A0MS03 RGN-202ENST00000352078 1611 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
TRBV5-3A0A0A0MS03 MTHFR-217ENST00000641820 1569 ntBASIC16.06■□□□□ 0.16
TRBV5-3A0A0A0MS03 EYA2-201ENST00000317304 1540 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
TRBV5-3A0A0A0MS03 TNFSF14-202ENST00000599359 1476 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
TRBV5-3A0A0A0MS03 C8orf46-215ENST00000522977 1347 ntTSL 2 BASIC16.06■□□□□ 0.16
TRBV5-3A0A0A0MS03 PGLS-201ENST00000252603 1028 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
TRBV5-3A0A0A0MS03 STX8-201ENST00000306357 1246 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
TRBV5-3A0A0A0MS03 BET1L-202ENST00000332865 533 ntTSL 5 BASIC16.06■□□□□ 0.16
TRBV5-3A0A0A0MS03 QRFP-201ENST00000343079 411 ntAPPRIS P1 BASIC16.06■□□□□ 0.16
TRBV5-3A0A0A0MS03 PPIH-202ENST00000372549 327 ntTSL 3 BASIC16.06■□□□□ 0.16
TRBV5-3A0A0A0MS03 FXN-203ENST00000396366 922 ntTSL 2 BASIC16.06■□□□□ 0.16
TRBV5-3A0A0A0MS03 RCN1P1-201ENST00000400413 996 ntBASIC16.06■□□□□ 0.16
TRBV5-3A0A0A0MS03 SPDYE21P-201ENST00000413323 827 ntBASIC16.06■□□□□ 0.16
TRBV5-3A0A0A0MS03 AL096828.1-201ENST00000423020 542 ntTSL 4 BASIC16.06■□□□□ 0.16
TRBV5-3A0A0A0MS03 C17orf49-208ENST00000552402 760 ntTSL 2 BASIC16.06■□□□□ 0.16
TRBV5-3A0A0A0MS03 ANKRD34C-AS1-205ENST00000560452 576 ntTSL 4 BASIC16.06■□□□□ 0.16
TRBV5-3A0A0A0MS03 AC008105.3-202ENST00000585471 1077 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
TRBV5-3A0A0A0MS03 AL121672.3-201ENST00000608644 468 ntBASIC16.06■□□□□ 0.16
TRBV5-3A0A0A0MS03 AXIN2-208ENST00000611991 1019 ntTSL 5 BASIC16.06■□□□□ 0.16
TRBV5-3A0A0A0MS03 PDE1C-201ENST00000321453 2898 ntAPPRIS ALT1 TSL 2 BASIC16.06■□□□□ 0.16
TRBV5-3A0A0A0MS03 APOPT1-201ENST00000409074 2523 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
TRBV5-3A0A0A0MS03 AL139300.1-201ENST00000472726 2505 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.16
TRBV5-3A0A0A0MS03 TLE2-202ENST00000426948 2406 ntTSL 5 BASIC16.06■□□□□ 0.16
TRBV5-3A0A0A0MS03 CLU-215ENST00000523500 2381 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
TRBV5-3A0A0A0MS03 AC007950.2-201ENST00000615045 2347 ntBASIC16.06■□□□□ 0.16
TRBV5-3A0A0A0MS03 LTBP4-203ENST00000308370 4948 ntAPPRIS P4 TSL 1 (best) BASIC16.06■□□□□ 0.16
TRBV5-3A0A0A0MS03 NR2C1-201ENST00000330677 2014 ntTSL 5 BASIC16.06■□□□□ 0.16
TRBV5-3A0A0A0MS03 CTSD-213ENST00000637915 1982 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
TRBV5-3A0A0A0MS03 LZTS3-203ENST00000360342 4055 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
TRBV5-3A0A0A0MS03 RIMS4-201ENST00000372851 5203 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
TRBV5-3A0A0A0MS03 PC-204ENST00000524491 1714 ntTSL 2 BASIC16.05■□□□□ 0.16
TRBV5-3A0A0A0MS03 TGIF1-205ENST00000401449 1670 ntTSL 2 BASIC16.05■□□□□ 0.16
TRBV5-3A0A0A0MS03 IRS2-201ENST00000375856 8138 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
TRBV5-3A0A0A0MS03 AC006538.1-201ENST00000567905 1585 ntBASIC16.05■□□□□ 0.16
TRBV5-3A0A0A0MS03 SCARB2-223ENST00000640640 4608 ntTSL 5 BASIC16.05■□□□□ 0.16
TRBV5-3A0A0A0MS03 TVP23C-201ENST00000225576 1527 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
TRBV5-3A0A0A0MS03 GPER1-204ENST00000401670 1542 ntAPPRIS P1 TSL 2 BASIC16.05■□□□□ 0.16
TRBV5-3A0A0A0MS03 SIGLEC7-201ENST00000305628 1469 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
TRBV5-3A0A0A0MS03 ARHGAP8-201ENST00000336963 1487 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
TRBV5-3A0A0A0MS03 KLC4-202ENST00000347162 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
TRBV5-3A0A0A0MS03 FLJ31104-201ENST00000500093 2289 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
TRBV5-3A0A0A0MS03 ABR-203ENST00000536794 2213 ntTSL 2 BASIC16.05■□□□□ 0.16
TRBV5-3A0A0A0MS03 SHBG-201ENST00000340624 1311 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
TRBV5-3A0A0A0MS03 TAX1BP3-202ENST00000611779 1302 ntTSL 2 BASIC16.05■□□□□ 0.16
TRBV5-3A0A0A0MS03 HCCS-202ENST00000380762 1072 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
TRBV5-3A0A0A0MS03 AL031133.1-201ENST00000406807 723 ntBASIC16.05■□□□□ 0.16
TRBV5-3A0A0A0MS03 AL020989.1-201ENST00000422979 469 ntBASIC16.05■□□□□ 0.16
TRBV5-3A0A0A0MS03 XXYLT1-205ENST00000437101 2149 ntTSL 2 BASIC16.05■□□□□ 0.16
TRBV5-3A0A0A0MS03 SIGLEC30P-201ENST00000455569 941 ntBASIC16.05■□□□□ 0.16
TRBV5-3A0A0A0MS03 BX276092.5-203ENST00000456199 560 ntBASIC16.05■□□□□ 0.16
TRBV5-3A0A0A0MS03 PDZD7-203ENST00000470414 1057 ntTSL 2 BASIC16.05■□□□□ 0.16
TRBV5-3A0A0A0MS03 IGFLR1-209ENST00000592537 1195 ntAPPRIS P2 TSL 1 (best) BASIC16.05■□□□□ 0.16
TRBV5-3A0A0A0MS03 HNF1B-206ENST00000620125 1103 ntTSL 5 BASIC16.05■□□□□ 0.16
TRBV5-3A0A0A0MS03 C1QTNF8-202ENST00000621771 897 ntTSL 5 BASIC16.05■□□□□ 0.16
TRBV5-3A0A0A0MS03 AL121956.5-201ENST00000625261 221 ntBASIC16.05■□□□□ 0.16
TRBV5-3A0A0A0MS03 CLCNKA-203ENST00000439316 1997 ntTSL 2 BASIC16.05■□□□□ 0.16
TRBV5-3A0A0A0MS03 CCT6A-201ENST00000275603 2719 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
TRBV5-3A0A0A0MS03 TINF2-208ENST00000558566 1874 ntAPPRIS ALT2 TSL 2 BASIC16.05■□□□□ 0.16
TRBV5-3A0A0A0MS03 APLNR-203ENST00000611099 1789 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
TRBV5-3A0A0A0MS03 PPEF2-207ENST00000621010 1797 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
TRBV5-3A0A0A0MS03 ACAT2-201ENST00000367048 3180 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
TRBV5-3A0A0A0MS03 SLC44A1-203ENST00000374724 3088 ntAPPRIS ALT1 TSL 5 BASIC16.05■□□□□ 0.16
TRBV5-3A0A0A0MS03 FBXO4-201ENST00000281623 1682 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
TRBV5-3A0A0A0MS03 ANTXRL-205ENST00000620264 2206 ntAPPRIS P2 TSL 5 BASIC16.04■□□□□ 0.16
TRBV5-3A0A0A0MS03 EGR3-204ENST00000522910 1553 ntAPPRIS ALT1 TSL 2 BASIC16.04■□□□□ 0.16
TRBV5-3A0A0A0MS03 CTSB-201ENST00000345125 2028 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
TRBV5-3A0A0A0MS03 SIGLEC16-201ENST00000599858 1437 ntBASIC16.04■□□□□ 0.16
TRBV5-3A0A0A0MS03 BAG5-202ENST00000337322 1960 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
TRBV5-3A0A0A0MS03 FLVCR1-AS1-201ENST00000356684 2525 ntTSL 2 BASIC16.04■□□□□ 0.16
TRBV5-3A0A0A0MS03 TMEM127-202ENST00000432959 3099 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
TRBV5-3A0A0A0MS03 TNFRSF13B-201ENST00000261652 1357 ntAPPRIS P2 TSL 1 (best) BASIC16.04■□□□□ 0.16
TRBV5-3A0A0A0MS03 ARHGEF28-204ENST00000437974 5792 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
TRBV5-3A0A0A0MS03 CYP4F22-202ENST00000601005 2445 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
TRBV5-3A0A0A0MS03 AC005332.1-201ENST00000577698 1310 ntBASIC16.04■□□□□ 0.16
TRBV5-3A0A0A0MS03 ZYG11A-202ENST00000371532 3942 ntTSL 5 BASIC16.04■□□□□ 0.16
TRBV5-3A0A0A0MS03 TMEM161A-201ENST00000162044 1820 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
TRBV5-3A0A0A0MS03 KHNYN-202ENST00000553935 3359 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
TRBV5-3A0A0A0MS03 SLX1A-201ENST00000251303 1091 ntAPPRIS P4 TSL 1 (best) BASIC16.04■□□□□ 0.16
TRBV5-3A0A0A0MS03 SLX1B-201ENST00000330181 1165 ntAPPRIS P4 TSL 1 (best) BASIC16.04■□□□□ 0.16
TRBV5-3A0A0A0MS03 RCN1P2-201ENST00000398357 915 ntBASIC16.04■□□□□ 0.16
TRBV5-3A0A0A0MS03 ING5-202ENST00000406941 946 ntAPPRIS ALT1 TSL 1 (best) BASIC16.04■□□□□ 0.16
TRBV5-3A0A0A0MS03 AC093734.1-201ENST00000416100 242 ntTSL 3 BASIC16.04■□□□□ 0.16
TRBV5-3A0A0A0MS03 TP53TG1-202ENST00000416560 710 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
TRBV5-3A0A0A0MS03 DRAXINP1-201ENST00000437611 948 ntBASIC16.04■□□□□ 0.16
TRBV5-3A0A0A0MS03 NOL7-202ENST00000451315 1184 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
TRBV5-3A0A0A0MS03 NAPSB-203ENST00000531692 561 ntTSL 2 BASIC16.04■□□□□ 0.16
TRBV5-3A0A0A0MS03 TPSP2-201ENST00000561760 610 ntBASIC16.04■□□□□ 0.16
TRBV5-3A0A0A0MS03 AC114488.2-214ENST00000609033 813 ntTSL 5 BASIC16.04■□□□□ 0.16
TRBV5-3A0A0A0MS03 FBXL22-204ENST00000638704 729 ntAPPRIS ALT2 TSL 2 BASIC16.04■□□□□ 0.16
TRBV5-3A0A0A0MS03 HSP90B1-211ENST00000640977 1127 ntTSL 5 BASIC16.04■□□□□ 0.16
TRBV5-3A0A0A0MS03 TFAP2D-201ENST00000008391 1711 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
TRBV5-3A0A0A0MS03 SDC4-201ENST00000372733 2613 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
TRBV5-3A0A0A0MS03 MYEF2-215ENST00000610570 2591 ntTSL 5 BASIC16.04■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 28.1 ms