Protein–RNA interactions for Protein: Q9Y5G1

PCDHGB3, Protocadherin gamma-B3, humanhuman

Predictions only

Length 929 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB3Q9Y5G1 FOXD4L4-201ENST00000377413 2230 ntAPPRIS P1 BASIC16.35■□□□□ 0.21
PCDHGB3Q9Y5G1 DUSP8-201ENST00000331588 4455 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
PCDHGB3Q9Y5G1 CD300A-202ENST00000360141 1858 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
PCDHGB3Q9Y5G1 RASSF8-AS1-202ENST00000500276 2610 ntTSL 2 BASIC16.35■□□□□ 0.21
PCDHGB3Q9Y5G1 CAMK1D-201ENST00000378845 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
PCDHGB3Q9Y5G1 DLG4-201ENST00000302955 3184 ntAPPRIS P3 TSL 5 BASIC16.35■□□□□ 0.21
PCDHGB3Q9Y5G1 DLG4-202ENST00000399506 3185 ntAPPRIS ALT1 TSL 2 BASIC16.35■□□□□ 0.21
PCDHGB3Q9Y5G1 RIC8B-203ENST00000392839 2440 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
PCDHGB3Q9Y5G1 HYAL3-202ENST00000359051 1635 ntTSL 5 BASIC16.35■□□□□ 0.21
PCDHGB3Q9Y5G1 KDM8-202ENST00000441782 1612 ntTSL 2 BASIC16.35■□□□□ 0.21
PCDHGB3Q9Y5G1 CDCP2-202ENST00000530059 1623 ntAPPRIS ALT2 TSL 5 BASIC16.35■□□□□ 0.21
PCDHGB3Q9Y5G1 SPIDR-227ENST00000541342 3311 ntAPPRIS ALT2 TSL 2 BASIC16.35■□□□□ 0.21
PCDHGB3Q9Y5G1 OS9-205ENST00000413095 1660 ntTSL 2 BASIC16.35■□□□□ 0.21
PCDHGB3Q9Y5G1 C6orf15-201ENST00000259870 1140 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
PCDHGB3Q9Y5G1 INSL3-201ENST00000317306 755 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
PCDHGB3Q9Y5G1 PTPMT1-201ENST00000326656 928 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
PCDHGB3Q9Y5G1 SPIN2B-202ENST00000333933 1258 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
PCDHGB3Q9Y5G1 CMTM1-204ENST00000336328 606 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
PCDHGB3Q9Y5G1 CRELD2-202ENST00000403427 1242 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
PCDHGB3Q9Y5G1 KRTCAP3-202ENST00000407293 942 ntTSL 2 BASIC16.35■□□□□ 0.21
PCDHGB3Q9Y5G1 SEC61G-203ENST00000415949 732 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
PCDHGB3Q9Y5G1 ZNF436-AS1-203ENST00000454117 997 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
PCDHGB3Q9Y5G1 CMTM1-213ENST00000529506 581 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
PCDHGB3Q9Y5G1 CCDC61-201ENST00000536603 1282 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
PCDHGB3Q9Y5G1 AC091304.2-201ENST00000564639 760 ntBASIC16.35■□□□□ 0.21
PCDHGB3Q9Y5G1 ZNF688-207ENST00000567855 540 ntTSL 2 BASIC16.35■□□□□ 0.21
PCDHGB3Q9Y5G1 RN7SL510P-201ENST00000581311 263 ntBASIC16.35■□□□□ 0.21
PCDHGB3Q9Y5G1 AL121894.2-201ENST00000602977 491 ntBASIC16.35■□□□□ 0.21
PCDHGB3Q9Y5G1 AL139327.4-201ENST00000612362 153 ntBASIC16.35■□□□□ 0.21
PCDHGB3Q9Y5G1 IRF5-214ENST00000613821 595 ntTSL 5 BASIC16.35■□□□□ 0.21
PCDHGB3Q9Y5G1 HSP90B1-211ENST00000640977 1127 ntTSL 5 BASIC16.35■□□□□ 0.21
PCDHGB3Q9Y5G1 RAB15-203ENST00000533601 3515 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
PCDHGB3Q9Y5G1 SEPT9-202ENST00000423034 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC16.35■□□□□ 0.21
PCDHGB3Q9Y5G1 TAX1BP3-202ENST00000611779 1302 ntTSL 2 BASIC16.35■□□□□ 0.21
PCDHGB3Q9Y5G1 MFF-202ENST00000337110 1760 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
PCDHGB3Q9Y5G1 OLIG2-201ENST00000333337 3262 ntAPPRIS P1 BASIC16.35■□□□□ 0.21
PCDHGB3Q9Y5G1 WBP2-204ENST00000585462 1895 ntTSL 3 BASIC16.35■□□□□ 0.21
PCDHGB3Q9Y5G1 AC009779.2-201ENST00000552576 1443 ntTSL 4 BASIC16.35■□□□□ 0.21
PCDHGB3Q9Y5G1 SLC3A2-201ENST00000338663 1904 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
PCDHGB3Q9Y5G1 C9orf62-201ENST00000623103 1924 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
PCDHGB3Q9Y5G1 SHISA6-202ENST00000409168 7262 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
PCDHGB3Q9Y5G1 CCDC127-201ENST00000296824 9342 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
PCDHGB3Q9Y5G1 HMBS-203ENST00000442944 1548 ntTSL 5 BASIC16.35■□□□□ 0.21
PCDHGB3Q9Y5G1 LMF1-201ENST00000262301 2621 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
PCDHGB3Q9Y5G1 COLEC11-206ENST00000403096 1557 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
PCDHGB3Q9Y5G1 HSD11B1L-223ENST00000616276 1580 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
PCDHGB3Q9Y5G1 TTLL10-201ENST00000379288 2114 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
PCDHGB3Q9Y5G1 ZMIZ1-201ENST00000334512 7546 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
PCDHGB3Q9Y5G1 PTGES2-201ENST00000277462 1614 ntTSL 2 BASIC16.34■□□□□ 0.21
PCDHGB3Q9Y5G1 SLC41A3-203ENST00000360370 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
PCDHGB3Q9Y5G1 AC105020.1-201ENST00000435356 2205 ntBASIC16.34■□□□□ 0.21
PCDHGB3Q9Y5G1 PEX10-201ENST00000288774 2871 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
PCDHGB3Q9Y5G1 USP2-202ENST00000455332 2903 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
PCDHGB3Q9Y5G1 ANHX-201ENST00000419717 1765 ntAPPRIS P1 TSL 2 BASIC16.34■□□□□ 0.21
PCDHGB3Q9Y5G1 CBS-202ENST00000359624 2353 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
PCDHGB3Q9Y5G1 CBSL-203ENST00000618024 2353 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
PCDHGB3Q9Y5G1 SEH1L-202ENST00000399892 1846 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
PCDHGB3Q9Y5G1 EZR-202ENST00000367075 3096 ntAPPRIS P2 TSL 1 (best) BASIC16.34■□□□□ 0.21
PCDHGB3Q9Y5G1 POLR3E-203ENST00000418581 2529 ntTSL 2 BASIC16.34■□□□□ 0.21
PCDHGB3Q9Y5G1 POLR3H-202ENST00000355209 4416 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
PCDHGB3Q9Y5G1 CCDC134-201ENST00000255784 1270 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
PCDHGB3Q9Y5G1 C18orf32-201ENST00000318240 1128 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
PCDHGB3Q9Y5G1 HDDC3-201ENST00000330334 1047 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
PCDHGB3Q9Y5G1 CD9-202ENST00000382515 1229 ntTSL 5 BASIC16.34■□□□□ 0.21
PCDHGB3Q9Y5G1 GNB1L-203ENST00000405009 1076 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
PCDHGB3Q9Y5G1 LINC02247-201ENST00000417135 743 ntTSL 3 BASIC16.34■□□□□ 0.21
PCDHGB3Q9Y5G1 IGHV3-47-201ENST00000425060 335 ntBASIC16.34■□□□□ 0.21
PCDHGB3Q9Y5G1 AC068134.1-202ENST00000439072 356 ntTSL 5 BASIC16.34■□□□□ 0.21
PCDHGB3Q9Y5G1 KRT17P6-201ENST00000453795 1220 ntBASIC16.34■□□□□ 0.21
PCDHGB3Q9Y5G1 ABR-204ENST00000543210 1049 ntTSL 2 BASIC16.34■□□□□ 0.21
PCDHGB3Q9Y5G1 PNN-202ENST00000553331 656 ntTSL 3 BASIC16.34■□□□□ 0.21
PCDHGB3Q9Y5G1 ABR-217ENST00000572441 563 ntTSL 4 BASIC16.34■□□□□ 0.21
PCDHGB3Q9Y5G1 H2BFWT-202ENST00000611083 528 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
PCDHGB3Q9Y5G1 GSS-201ENST00000216951 1922 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
PCDHGB3Q9Y5G1 SOD2-215ENST00000546087 2558 ntTSL 2 BASIC16.34■□□□□ 0.21
PCDHGB3Q9Y5G1 MAN1C1-201ENST00000263979 2627 ntTSL 5 BASIC16.34■□□□□ 0.21
PCDHGB3Q9Y5G1 MAPRE1-201ENST00000375571 2623 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
PCDHGB3Q9Y5G1 ZNF79-204ENST00000617266 1969 ntTSL 3 BASIC16.34■□□□□ 0.21
PCDHGB3Q9Y5G1 BBC3-201ENST00000300880 1347 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
PCDHGB3Q9Y5G1 FZR1-202ENST00000395095 1491 ntAPPRIS ALT1 TSL 1 (best) BASIC16.34■□□□□ 0.21
PCDHGB3Q9Y5G1 PDLIM2-206ENST00000409141 1463 ntTSL 2 BASIC16.34■□□□□ 0.21
PCDHGB3Q9Y5G1 AL365277.1-202ENST00000331856 2241 ntTSL 2 BASIC16.34■□□□□ 0.21
PCDHGB3Q9Y5G1 PLXNB3-201ENST00000361971 6146 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
PCDHGB3Q9Y5G1 ASTN2-202ENST00000313400 4747 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
PCDHGB3Q9Y5G1 SLC35G6-201ENST00000412468 1697 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
PCDHGB3Q9Y5G1 TOM1L2-207ENST00000535933 1748 ntTSL 2 BASIC16.33■□□□□ 0.21
PCDHGB3Q9Y5G1 CNTNAP3-205ENST00000377659 2649 ntTSL 2 BASIC16.33■□□□□ 0.21
PCDHGB3Q9Y5G1 NRXN2-202ENST00000301894 3535 ntTSL 5 BASIC16.33■□□□□ 0.21
PCDHGB3Q9Y5G1 NAT6-205ENST00000443842 1820 ntAPPRIS ALT2 TSL 2 BASIC16.33■□□□□ 0.21
PCDHGB3Q9Y5G1 HYAL3-201ENST00000336307 1942 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
PCDHGB3Q9Y5G1 ZBTB7C-201ENST00000535628 4818 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
PCDHGB3Q9Y5G1 RXRB-201ENST00000374680 2908 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.21
PCDHGB3Q9Y5G1 ACTRT3-201ENST00000330368 2005 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
PCDHGB3Q9Y5G1 TMPRSS5-207ENST00000540540 2001 ntTSL 2 BASIC16.33■□□□□ 0.21
PCDHGB3Q9Y5G1 TNK2-AS1-201ENST00000458180 2096 ntTSL 2 BASIC16.33■□□□□ 0.21
PCDHGB3Q9Y5G1 ARHGAP44-202ENST00000340825 4211 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.21
PCDHGB3Q9Y5G1 ARHGAP44-203ENST00000379672 4228 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.21
PCDHGB3Q9Y5G1 LYRM9-203ENST00000460380 2196 ntTSL 2 BASIC16.33■□□□□ 0.2
PCDHGB3Q9Y5G1 DCLK2-204ENST00000506325 2298 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.2
PCDHGB3Q9Y5G1 PCDHA14-201ENST00000506751 2298 ntBASIC16.33■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 39.7 ms