Protein–RNA interactions for Protein: Q9Y3Y2

CHTOP, Chromatin target of PRMT1 protein, humanhuman

Known RBP Predictions only

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHTOPQ9Y3Y2 PHLDB1-223ENST00000600882 5479 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
CHTOPQ9Y3Y2 GPSM1-205ENST00000440944 3633 ntAPPRIS P2 TSL 5 BASIC12.41□□□□□ -0.42
CHTOPQ9Y3Y2 TOR2A-202ENST00000373281 2477 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
CHTOPQ9Y3Y2 PARP3-202ENST00000417220 2472 ntAPPRIS P3 TSL 5 BASIC12.4□□□□□ -0.42
CHTOPQ9Y3Y2 CAMKK2-201ENST00000324774 5598 ntAPPRIS P4 TSL 1 (best) BASIC12.4□□□□□ -0.42
CHTOPQ9Y3Y2 ARL8B-201ENST00000256496 3005 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
CHTOPQ9Y3Y2 LINC00937-207ENST00000544461 3033 ntTSL 2 BASIC12.4□□□□□ -0.42
CHTOPQ9Y3Y2 SCAP-206ENST00000428413 3749 ntTSL 5 BASIC12.4□□□□□ -0.42
CHTOPQ9Y3Y2 RET-202ENST00000355710 5659 ntAPPRIS P3 TSL 5 BASIC12.4□□□□□ -0.42
CHTOPQ9Y3Y2 MAP1S-201ENST00000324096 3419 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.42
CHTOPQ9Y3Y2 NRP2-205ENST00000412873 2730 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
CHTOPQ9Y3Y2 ICAM3-205ENST00000589261 2024 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
CHTOPQ9Y3Y2 DLG4-203ENST00000399510 3975 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
CHTOPQ9Y3Y2 C12orf49-201ENST00000261318 8404 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
CHTOPQ9Y3Y2 ADM-201ENST00000278175 1885 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
CHTOPQ9Y3Y2 LIMS1-202ENST00000338045 1876 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
CHTOPQ9Y3Y2 MBD1-202ENST00000269471 2980 ntAPPRIS ALT2 TSL 5 BASIC12.4□□□□□ -0.42
CHTOPQ9Y3Y2 ALDH1A2-201ENST00000249750 4098 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
CHTOPQ9Y3Y2 AD000671.3-202ENST00000591091 1712 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
CHTOPQ9Y3Y2 BTC-201ENST00000395743 2816 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
CHTOPQ9Y3Y2 PPP1R7-207ENST00000407025 1592 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.42
CHTOPQ9Y3Y2 PLEKHA4-201ENST00000263265 3088 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
CHTOPQ9Y3Y2 WASHC2C-208ENST00000537517 4417 ntAPPRIS ALT2 TSL 2 BASIC12.4□□□□□ -0.42
CHTOPQ9Y3Y2 AC012313.3-202ENST00000599109 3322 ntTSL 5 BASIC12.4□□□□□ -0.42
CHTOPQ9Y3Y2 CD72-211ENST00000612238 1424 ntAPPRIS ALT2 TSL 5 BASIC12.4□□□□□ -0.42
CHTOPQ9Y3Y2 C16orf58-211ENST00000570164 2783 ntAPPRIS ALT1 TSL 5 BASIC12.4□□□□□ -0.42
CHTOPQ9Y3Y2 ECE1-204ENST00000415912 5099 ntAPPRIS ALT1 TSL 1 (best) BASIC12.4□□□□□ -0.42
CHTOPQ9Y3Y2 TTC28-AS1-207ENST00000428584 5859 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
CHTOPQ9Y3Y2 ITPRIPL2-201ENST00000381440 7247 ntAPPRIS P1 BASIC12.4□□□□□ -0.42
CHTOPQ9Y3Y2 TOPAZ1-201ENST00000309765 5334 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.42
CHTOPQ9Y3Y2 MOV10L1-201ENST00000262794 3960 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.42
CHTOPQ9Y3Y2 PIN1-201ENST00000247970 997 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
CHTOPQ9Y3Y2 ZNF580-201ENST00000325333 1261 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
CHTOPQ9Y3Y2 PPP1CA-202ENST00000358239 1054 ntTSL 2 BASIC12.4□□□□□ -0.42
CHTOPQ9Y3Y2 FNDC11-201ENST00000370097 1119 ntAPPRIS P1 TSL 2 BASIC12.4□□□□□ -0.42
CHTOPQ9Y3Y2 CBY3-201ENST00000376974 785 ntAPPRIS P1 TSL 2 BASIC12.4□□□□□ -0.42
CHTOPQ9Y3Y2 TLCD1-202ENST00000394933 784 ntTSL 2 BASIC12.4□□□□□ -0.42
CHTOPQ9Y3Y2 MFSD4A-206ENST00000489709 1136 ntTSL 5 BASIC12.4□□□□□ -0.42
CHTOPQ9Y3Y2 AC092849.2-201ENST00000492523 333 ntTSL 3 BASIC12.4□□□□□ -0.42
CHTOPQ9Y3Y2 ZNF324-202ENST00000535298 1006 ntTSL 5 BASIC12.4□□□□□ -0.42
CHTOPQ9Y3Y2 SOX15-202ENST00000538513 1050 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
CHTOPQ9Y3Y2 PYCARD-AS1-201ENST00000561916 1095 ntTSL 2 BASIC12.4□□□□□ -0.42
CHTOPQ9Y3Y2 AC025259.3-201ENST00000564531 542 ntTSL 3 BASIC12.4□□□□□ -0.42
CHTOPQ9Y3Y2 SOX15-203ENST00000570788 1093 ntBASIC12.4□□□□□ -0.42
CHTOPQ9Y3Y2 GTF2IRD2B-206ENST00000614064 573 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
CHTOPQ9Y3Y2 GPRIN2-201ENST00000374314 1696 ntAPPRIS P1 BASIC12.4□□□□□ -0.42
CHTOPQ9Y3Y2 AC116353.5-201ENST00000638148 1699 ntBASIC12.4□□□□□ -0.42
CHTOPQ9Y3Y2 RABGGTA-201ENST00000216840 2088 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
CHTOPQ9Y3Y2 TAS1R1-201ENST00000333172 2892 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
CHTOPQ9Y3Y2 ITSN1-210ENST00000399353 3913 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
CHTOPQ9Y3Y2 AC104809.1-201ENST00000425110 2345 ntTSL 2 BASIC12.4□□□□□ -0.42
CHTOPQ9Y3Y2 GPANK1-203ENST00000375896 1910 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
CHTOPQ9Y3Y2 ASL-204ENST00000395331 1538 ntTSL 5 BASIC12.4□□□□□ -0.42
CHTOPQ9Y3Y2 LUC7L-204ENST00000397783 1504 ntTSL 2 BASIC12.4□□□□□ -0.42
CHTOPQ9Y3Y2 HAUS8-202ENST00000448593 1545 ntAPPRIS ALT2 TSL 5 BASIC12.4□□□□□ -0.42
CHTOPQ9Y3Y2 CYP51A1P1-201ENST00000492267 1507 ntBASIC12.4□□□□□ -0.42
CHTOPQ9Y3Y2 BBS7-204ENST00000506636 2570 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
CHTOPQ9Y3Y2 ARHGEF4-206ENST00000428230 2172 ntTSL 5 BASIC12.4□□□□□ -0.42
CHTOPQ9Y3Y2 HPN-202ENST00000392226 1783 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
CHTOPQ9Y3Y2 PACS2-205ENST00000547217 2809 ntTSL 5 BASIC12.4□□□□□ -0.42
CHTOPQ9Y3Y2 C11orf58-201ENST00000228136 2049 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
CHTOPQ9Y3Y2 MAGED2-207ENST00000396224 2026 ntAPPRIS P2 TSL 5 BASIC12.4□□□□□ -0.42
CHTOPQ9Y3Y2 TMPRSS5-207ENST00000540540 2001 ntTSL 2 BASIC12.4□□□□□ -0.42
CHTOPQ9Y3Y2 RUNX1T1-251ENST00000615601 7372 ntAPPRIS ALT1 TSL 5 BASIC12.4□□□□□ -0.42
CHTOPQ9Y3Y2 IRF2BP2-202ENST00000366610 4615 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
CHTOPQ9Y3Y2 PRDM15-201ENST00000269844 4881 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.42
CHTOPQ9Y3Y2 GDAP1L1-201ENST00000342560 2265 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
CHTOPQ9Y3Y2 SPOCK3-202ENST00000357545 2936 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.42
CHTOPQ9Y3Y2 PELI3-209ENST00000618547 2508 ntTSL 2 BASIC12.4□□□□□ -0.42
CHTOPQ9Y3Y2 RCC2-202ENST00000375436 4087 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
CHTOPQ9Y3Y2 GAPDH-201ENST00000229239 1875 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
CHTOPQ9Y3Y2 ITM2C-201ENST00000326407 1888 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
CHTOPQ9Y3Y2 CTNND2-214ENST00000511377 4336 ntTSL 1 (best) BASIC12.4□□□□□ -0.43
CHTOPQ9Y3Y2 ZNF519-206ENST00000589498 2117 ntTSL 2 BASIC12.4□□□□□ -0.43
CHTOPQ9Y3Y2 LCOR-202ENST00000356016 4834 ntAPPRIS P3 TSL 2 BASIC12.4□□□□□ -0.43
CHTOPQ9Y3Y2 CTXND1-201ENST00000560778 6890 ntAPPRIS P1 TSL 3 BASIC12.4□□□□□ -0.43
CHTOPQ9Y3Y2 TACO1-201ENST00000258975 1469 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.43
CHTOPQ9Y3Y2 HAUS4-217ENST00000555367 1454 ntTSL 5 BASIC12.4□□□□□ -0.43
CHTOPQ9Y3Y2 MRPL3-201ENST00000264995 1706 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.43
CHTOPQ9Y3Y2 ZNF302-215ENST00000627982 1723 ntAPPRIS ALT2 TSL 5 BASIC12.4□□□□□ -0.43
CHTOPQ9Y3Y2 KIAA1841-201ENST00000295031 3116 ntTSL 1 (best) BASIC12.4□□□□□ -0.43
CHTOPQ9Y3Y2 SLC5A6-203ENST00000408041 2230 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
CHTOPQ9Y3Y2 KPNA2-202ENST00000537025 2456 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
CHTOPQ9Y3Y2 SSBP3-203ENST00000371319 1578 ntAPPRIS ALT1 TSL 2 BASIC12.39□□□□□ -0.43
CHTOPQ9Y3Y2 ETFBKMT-202ENST00000395763 2055 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
CHTOPQ9Y3Y2 CLDN22-201ENST00000323319 2581 ntAPPRIS P1 BASIC12.39□□□□□ -0.43
CHTOPQ9Y3Y2 ZNF713-202ENST00000429591 4339 ntAPPRIS P2 TSL 5 BASIC12.39□□□□□ -0.43
CHTOPQ9Y3Y2 HACE1-201ENST00000262903 4576 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
CHTOPQ9Y3Y2 ZNF671-201ENST00000317398 2431 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
CHTOPQ9Y3Y2 RHBDF1P1-201ENST00000427504 1941 ntBASIC12.39□□□□□ -0.43
CHTOPQ9Y3Y2 UGT3A2-204ENST00000513300 1924 ntTSL 2 BASIC12.39□□□□□ -0.43
CHTOPQ9Y3Y2 AC092143.3-201ENST00000565150 1900 ntTSL 5 BASIC12.39□□□□□ -0.43
CHTOPQ9Y3Y2 SEC16A-202ENST00000290037 8982 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
CHTOPQ9Y3Y2 PBX3-207ENST00000447726 2789 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
CHTOPQ9Y3Y2 AC105917.1-201ENST00000506637 2539 ntBASIC12.39□□□□□ -0.43
CHTOPQ9Y3Y2 DLGAP1-220ENST00000581699 2258 ntTSL 2 BASIC12.39□□□□□ -0.43
CHTOPQ9Y3Y2 TCTEX1D1-201ENST00000282670 2001 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
CHTOPQ9Y3Y2 SMTN-202ENST00000347557 3130 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
CHTOPQ9Y3Y2 ZIC4-212ENST00000484399 1774 ntAPPRIS P1 TSL 2 BASIC12.39□□□□□ -0.43
CHTOPQ9Y3Y2 AC105001.2-201ENST00000554914 1753 ntAPPRIS P1 TSL 2 BASIC12.39□□□□□ -0.43
Retrieved 100 of 98,524 protein–RNA pairs in 29.2 ms