Protein–RNA interactions for Protein: Q9Y3T6

R3HCC1, R3H and coiled-coil domain-containing protein 1, humanhuman

Known RBP Predictions only

Length 440 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
R3HCC1Q9Y3T6 LINC02317-201ENST00000555413 426 ntTSL 3 BASIC19.75■□□□□ 0.75
R3HCC1Q9Y3T6 NAA38-203ENST00000575071 553 ntTSL 2 BASIC19.75■□□□□ 0.75
R3HCC1Q9Y3T6 LINC00092-202ENST00000580908 580 ntTSL 2 BASIC19.75■□□□□ 0.75
R3HCC1Q9Y3T6 AC079602.3-201ENST00000623931 403 ntBASIC19.75■□□□□ 0.75
R3HCC1Q9Y3T6 SNCAIP-202ENST00000261368 3745 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
R3HCC1Q9Y3T6 DIMT1-201ENST00000199320 2859 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
R3HCC1Q9Y3T6 HIC2-201ENST00000407464 6798 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
R3HCC1Q9Y3T6 ELP5-204ENST00000396628 1423 ntAPPRIS P2 TSL 1 (best) BASIC19.75■□□□□ 0.75
R3HCC1Q9Y3T6 GSDMD-201ENST00000262580 1762 ntAPPRIS P2 TSL 1 (best) BASIC19.75■□□□□ 0.75
R3HCC1Q9Y3T6 QRICH2-205ENST00000636395 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
R3HCC1Q9Y3T6 PLIN1-202ENST00000430628 2900 ntAPPRIS P1 TSL 5 BASIC19.75■□□□□ 0.75
R3HCC1Q9Y3T6 SPATS2L-202ENST00000360760 2119 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
R3HCC1Q9Y3T6 LRRTM1-202ENST00000409148 2126 ntAPPRIS P1 TSL 4 BASIC19.75■□□□□ 0.75
R3HCC1Q9Y3T6 PCNX2-201ENST00000258229 7518 ntAPPRIS P2 TSL 5 BASIC19.75■□□□□ 0.75
R3HCC1Q9Y3T6 MXD1-201ENST00000264444 5587 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
R3HCC1Q9Y3T6 GRAP2-202ENST00000407075 1304 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
R3HCC1Q9Y3T6 PML-215ENST00000565898 5393 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
R3HCC1Q9Y3T6 GMCL1P1-201ENST00000463439 1581 ntBASIC19.74■□□□□ 0.75
R3HCC1Q9Y3T6 AC105917.1-201ENST00000506637 2539 ntBASIC19.74■□□□□ 0.75
R3HCC1Q9Y3T6 MBNL1-201ENST00000282486 6422 ntAPPRIS P4 TSL 5 BASIC19.74■□□□□ 0.75
R3HCC1Q9Y3T6 KLC4-202ENST00000347162 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
R3HCC1Q9Y3T6 CXorf40A-209ENST00000441248 2411 ntAPPRIS P3 TSL 1 (best) BASIC19.74■□□□□ 0.75
R3HCC1Q9Y3T6 DBET-201ENST00000630918 3363 ntBASIC19.74■□□□□ 0.75
R3HCC1Q9Y3T6 ROBO3-201ENST00000397801 4569 ntAPPRIS P2 TSL 1 (best) BASIC19.74■□□□□ 0.75
R3HCC1Q9Y3T6 ROBO3-220ENST00000538940 4551 ntAPPRIS ALT2 TSL 5 BASIC19.74■□□□□ 0.75
R3HCC1Q9Y3T6 CDK11B-204ENST00000407249 2677 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
R3HCC1Q9Y3T6 AGPAT2-201ENST00000371694 1391 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
R3HCC1Q9Y3T6 TCTN1-229ENST00000614115 1965 ntTSL 5 BASIC19.74■□□□□ 0.75
R3HCC1Q9Y3T6 BNC1-201ENST00000345382 4610 ntAPPRIS P3 TSL 1 (best) BASIC19.74■□□□□ 0.75
R3HCC1Q9Y3T6 NDUFAF2-201ENST00000296597 719 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
R3HCC1Q9Y3T6 HLA-F-217ENST00000334668 1283 ntAPPRIS ALT2 BASIC19.74■□□□□ 0.75
R3HCC1Q9Y3T6 CLN3-202ENST00000355477 1173 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
R3HCC1Q9Y3T6 SLC29A1-206ENST00000371755 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
R3HCC1Q9Y3T6 SFTPD-201ENST00000372292 1281 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
R3HCC1Q9Y3T6 BECN2-201ENST00000419583 1296 ntAPPRIS P1 BASIC19.74■□□□□ 0.75
R3HCC1Q9Y3T6 HLA-F-220ENST00000434407 884 ntBASIC19.74■□□□□ 0.75
R3HCC1Q9Y3T6 PTX4-202ENST00000440447 1117 ntTSL 5 BASIC19.74■□□□□ 0.75
R3HCC1Q9Y3T6 LBX1-AS1-203ENST00000454527 740 ntTSL 5 BASIC19.74■□□□□ 0.75
R3HCC1Q9Y3T6 LY6E-209ENST00000521003 740 ntAPPRIS P2 TSL 2 BASIC19.74■□□□□ 0.75
R3HCC1Q9Y3T6 ANKRD34C-AS1-201ENST00000557790 594 ntTSL 3 BASIC19.74■□□□□ 0.75
R3HCC1Q9Y3T6 LINC01582-202ENST00000561215 452 ntTSL 4 BASIC19.74■□□□□ 0.75
R3HCC1Q9Y3T6 AL136038.3-201ENST00000561909 1096 ntBASIC19.74■□□□□ 0.75
R3HCC1Q9Y3T6 AC091076.1-201ENST00000610741 619 ntBASIC19.74■□□□□ 0.75
R3HCC1Q9Y3T6 HYMAI.1-201ENST00000620949 238 ntBASIC19.74■□□□□ 0.75
R3HCC1Q9Y3T6 DFFB-212ENST00000625756 649 ntTSL 5 BASIC19.74■□□□□ 0.75
R3HCC1Q9Y3T6 ZBTB22-207ENST00000418724 2645 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
R3HCC1Q9Y3T6 PROC-201ENST00000234071 1773 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
R3HCC1Q9Y3T6 PTGES-201ENST00000340607 1774 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
R3HCC1Q9Y3T6 XPO5-201ENST00000265351 5364 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
R3HCC1Q9Y3T6 WDR45-205ENST00000376358 1432 ntTSL 2 BASIC19.74■□□□□ 0.75
R3HCC1Q9Y3T6 ASCL5-202ENST00000458416 1420 ntAPPRIS P1 BASIC19.74■□□□□ 0.75
R3HCC1Q9Y3T6 ZXDC-202ENST00000389709 3405 ntAPPRIS P4 TSL 1 (best) BASIC19.74■□□□□ 0.75
R3HCC1Q9Y3T6 STKLD1-201ENST00000371957 2825 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
R3HCC1Q9Y3T6 TRIM7-204ENST00000393319 2320 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
R3HCC1Q9Y3T6 NUP50-203ENST00000407019 2059 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
R3HCC1Q9Y3T6 UROS-202ENST00000368778 1556 ntTSL 2 BASIC19.74■□□□□ 0.75
R3HCC1Q9Y3T6 CREBBP-201ENST00000262367 10803 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
R3HCC1Q9Y3T6 TRIM11-201ENST00000284551 2715 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
R3HCC1Q9Y3T6 PKLR-202ENST00000392414 2479 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
R3HCC1Q9Y3T6 SLC9A6-203ENST00000370701 4755 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
R3HCC1Q9Y3T6 ZBTB46-201ENST00000245663 5185 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
R3HCC1Q9Y3T6 KLHL33-201ENST00000344581 1863 ntTSL 5 BASIC19.73■□□□□ 0.75
R3HCC1Q9Y3T6 HELZ2-202ENST00000427522 7827 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
R3HCC1Q9Y3T6 MEG3-205ENST00000412736 1615 ntTSL 2 BASIC19.73■□□□□ 0.75
R3HCC1Q9Y3T6 BEGAIN-201ENST00000355173 2674 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
R3HCC1Q9Y3T6 PHGDH-209ENST00000641074 1780 ntBASIC19.73■□□□□ 0.75
R3HCC1Q9Y3T6 SLC30A4-201ENST00000261867 7157 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
R3HCC1Q9Y3T6 ZNF367-201ENST00000375256 3646 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
R3HCC1Q9Y3T6 CIAO1-203ENST00000488633 1533 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
R3HCC1Q9Y3T6 UQCC3-201ENST00000377953 1947 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
R3HCC1Q9Y3T6 HMCN2-204ENST00000611173 1920 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
R3HCC1Q9Y3T6 SDF4-201ENST00000263741 2079 ntAPPRIS P3 TSL 1 (best) BASIC19.73■□□□□ 0.75
R3HCC1Q9Y3T6 CALHM3-201ENST00000369783 1652 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
R3HCC1Q9Y3T6 CD1E-210ENST00000368165 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
R3HCC1Q9Y3T6 PTGDS-202ENST00000371625 807 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
R3HCC1Q9Y3T6 TBC1D7-205ENST00000379307 1084 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
R3HCC1Q9Y3T6 EEF1D-202ENST00000395119 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
R3HCC1Q9Y3T6 AL645929.1-201ENST00000420084 975 ntBASIC19.73■□□□□ 0.75
R3HCC1Q9Y3T6 TMEM243-203ENST00000433078 1273 ntAPPRIS P1 TSL 2 BASIC19.73■□□□□ 0.75
R3HCC1Q9Y3T6 CD1E-214ENST00000452291 745 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
R3HCC1Q9Y3T6 AL109797.1-201ENST00000452501 835 ntTSL 2 BASIC19.73■□□□□ 0.75
R3HCC1Q9Y3T6 AC083849.1-201ENST00000615227 514 ntBASIC19.73■□□□□ 0.75
R3HCC1Q9Y3T6 TBX5-203ENST00000405440 2203 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
R3HCC1Q9Y3T6 ZNF134-201ENST00000396161 4914 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
R3HCC1Q9Y3T6 EWSR1-202ENST00000332035 1989 ntAPPRIS ALT2 TSL 2 BASIC19.73■□□□□ 0.75
R3HCC1Q9Y3T6 NAA60-201ENST00000360862 2522 ntTSL 2 BASIC19.73■□□□□ 0.75
R3HCC1Q9Y3T6 PDX1-201ENST00000381033 2501 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
R3HCC1Q9Y3T6 MRM2-203ENST00000440306 1570 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
R3HCC1Q9Y3T6 TTLL10-201ENST00000379288 2114 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
R3HCC1Q9Y3T6 CTCF-201ENST00000264010 3939 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
R3HCC1Q9Y3T6 PAK4-209ENST00000599470 1715 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
R3HCC1Q9Y3T6 GPRIN1-201ENST00000303991 4211 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
R3HCC1Q9Y3T6 GCSH-209ENST00000639689 2412 ntTSL 5 BASIC19.73■□□□□ 0.75
R3HCC1Q9Y3T6 PCDH1-203ENST00000394536 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
R3HCC1Q9Y3T6 NDUFB9-206ENST00000522532 1319 ntTSL 2 BASIC19.73■□□□□ 0.75
R3HCC1Q9Y3T6 CD72-204ENST00000396757 2035 ntAPPRIS P2 TSL 5 BASIC19.73■□□□□ 0.75
R3HCC1Q9Y3T6 SDHAP2-201ENST00000455183 2001 ntBASIC19.73■□□□□ 0.75
R3HCC1Q9Y3T6 PLPPR5-202ENST00000370188 4139 ntAPPRIS ALT1 TSL 1 (best) BASIC19.73■□□□□ 0.75
R3HCC1Q9Y3T6 ADARB1-204ENST00000389863 3563 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
R3HCC1Q9Y3T6 SLBP-201ENST00000318386 1635 ntAPPRIS ALT1 TSL 3 BASIC19.73■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 30.5 ms