Protein–RNA interactions for Protein: Q9Y3C5

RNF11, RING finger protein 11, humanhuman

Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF11Q9Y3C5 SMARCA4-215ENST00000590574 5282 ntAPPRIS ALT1 TSL 5 BASIC16.8■□□□□ 0.28
RNF11Q9Y3C5 CD300A-202ENST00000360141 1858 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
RNF11Q9Y3C5 APOA4-201ENST00000357780 1473 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
RNF11Q9Y3C5 SSH3-201ENST00000308127 2871 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
RNF11Q9Y3C5 HTR1A-201ENST00000323865 1778 ntAPPRIS P1 BASIC16.79■□□□□ 0.28
RNF11Q9Y3C5 GOSR1-201ENST00000225724 6039 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
RNF11Q9Y3C5 BATF2-201ENST00000301887 2142 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
RNF11Q9Y3C5 ZNF628-201ENST00000391718 3177 ntAPPRIS ALT2 BASIC16.79■□□□□ 0.28
RNF11Q9Y3C5 ZNF281-201ENST00000294740 4891 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
RNF11Q9Y3C5 FOXP1-218ENST00000498215 2400 ntAPPRIS P3 TSL 2 BASIC16.79■□□□□ 0.28
RNF11Q9Y3C5 RRBP1-208ENST00000470422 2070 ntTSL 2 BASIC16.79■□□□□ 0.28
RNF11Q9Y3C5 ILVBL-209ENST00000534378 2067 ntTSL 5 BASIC16.79■□□□□ 0.28
RNF11Q9Y3C5 SH2B3-202ENST00000538307 2062 ntTSL 2 BASIC16.79■□□□□ 0.28
RNF11Q9Y3C5 CACNA1A-215ENST00000635727 7536 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
RNF11Q9Y3C5 SGCB-201ENST00000381431 4431 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
RNF11Q9Y3C5 CPEB3-203ENST00000614585 5789 ntAPPRIS P3 TSL 5 BASIC16.79■□□□□ 0.28
RNF11Q9Y3C5 MYO1B-204ENST00000392318 5082 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
RNF11Q9Y3C5 CHRM2-201ENST00000320658 1694 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
RNF11Q9Y3C5 ZNF414-202ENST00000393927 2300 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
RNF11Q9Y3C5 HMGXB3-201ENST00000502717 4974 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
RNF11Q9Y3C5 GSTM4-201ENST00000326729 1321 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
RNF11Q9Y3C5 RNF31-201ENST00000324103 3627 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
RNF11Q9Y3C5 SMUG1-209ENST00000505128 2607 ntTSL 2 BASIC16.79■□□□□ 0.28
RNF11Q9Y3C5 SLC1A4-201ENST00000234256 4561 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
RNF11Q9Y3C5 NSDHL-203ENST00000440023 1630 ntAPPRIS P2 TSL 5 BASIC16.79■□□□□ 0.28
RNF11Q9Y3C5 WTAP-205ENST00000614346 1623 ntTSL 2 BASIC16.79■□□□□ 0.28
RNF11Q9Y3C5 MC1R-204ENST00000639847 2567 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
RNF11Q9Y3C5 SPTBN4-204ENST00000392025 8671 ntAPPRIS ALT1 TSL 5 BASIC16.79■□□□□ 0.28
RNF11Q9Y3C5 MAT2A-202ENST00000409017 1927 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
RNF11Q9Y3C5 RPS12-201ENST00000230050 631 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
RNF11Q9Y3C5 TYMSOS-201ENST00000323813 844 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
RNF11Q9Y3C5 HYI-201ENST00000372425 1265 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
RNF11Q9Y3C5 NFIB-201ENST00000380921 1274 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
RNF11Q9Y3C5 DYNLL1-203ENST00000392509 814 ntAPPRIS P1 TSL 3 BASIC16.79■□□□□ 0.28
RNF11Q9Y3C5 RCN1P2-201ENST00000398357 915 ntBASIC16.79■□□□□ 0.28
RNF11Q9Y3C5 COPS8-203ENST00000409334 794 ntTSL 5 BASIC16.79■□□□□ 0.28
RNF11Q9Y3C5 MOGAT1-201ENST00000446656 1048 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
RNF11Q9Y3C5 AC096582.2-201ENST00000510860 516 ntBASIC16.79■□□□□ 0.28
RNF11Q9Y3C5 STK19B-204ENST00000512515 211 ntBASIC16.79■□□□□ 0.28
RNF11Q9Y3C5 AP002807.1-202ENST00000526897 791 ntTSL 2 BASIC16.79■□□□□ 0.28
RNF11Q9Y3C5 AC139749.1-201ENST00000534584 1094 ntTSL 3 BASIC16.79■□□□□ 0.28
RNF11Q9Y3C5 AL157871.1-202ENST00000556458 478 ntTSL 5 BASIC16.79■□□□□ 0.28
RNF11Q9Y3C5 AC015712.1-203ENST00000559331 593 ntTSL 3 BASIC16.79■□□□□ 0.28
RNF11Q9Y3C5 AC092338.2-202ENST00000567158 611 ntTSL 5 BASIC16.79■□□□□ 0.28
RNF11Q9Y3C5 RMI2-205ENST00000576027 818 ntTSL 2 BASIC16.79■□□□□ 0.28
RNF11Q9Y3C5 BCL10-202ENST00000620248 774 ntTSL 5 BASIC16.79■□□□□ 0.28
RNF11Q9Y3C5 LINC00271-201ENST00000421378 1580 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
RNF11Q9Y3C5 AC009336.1-201ENST00000608941 1553 ntBASIC16.79■□□□□ 0.28
RNF11Q9Y3C5 CACNA1A-225ENST00000636389 8137 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
RNF11Q9Y3C5 CSF1-204ENST00000369802 2484 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
RNF11Q9Y3C5 ELOVL7-205ENST00000508821 3994 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
RNF11Q9Y3C5 CYP4F22-202ENST00000601005 2445 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
RNF11Q9Y3C5 MYC-202ENST00000377970 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
RNF11Q9Y3C5 CHGA-202ENST00000334654 1474 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
RNF11Q9Y3C5 ZFP91-201ENST00000316059 5220 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
RNF11Q9Y3C5 DPEP3-201ENST00000268793 2018 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
RNF11Q9Y3C5 C3orf58-201ENST00000315691 4346 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
RNF11Q9Y3C5 PRR5-203ENST00000403581 2279 ntTSL 2 BASIC16.79■□□□□ 0.28
RNF11Q9Y3C5 DFNA5-207ENST00000419307 2265 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
RNF11Q9Y3C5 WIZ-201ENST00000263381 5695 ntAPPRIS P2 TSL 2 BASIC16.79■□□□□ 0.28
RNF11Q9Y3C5 OS9-205ENST00000413095 1660 ntTSL 2 BASIC16.78■□□□□ 0.28
RNF11Q9Y3C5 AL135999.2-201ENST00000622438 1686 ntBASIC16.78■□□□□ 0.28
RNF11Q9Y3C5 INTS4P1-201ENST00000438455 1935 ntBASIC16.78■□□□□ 0.28
RNF11Q9Y3C5 AC011473.4-202ENST00000250366 1602 ntAPPRIS P5 TSL 2 BASIC16.78■□□□□ 0.28
RNF11Q9Y3C5 EMB-204ENST00000508934 1617 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
RNF11Q9Y3C5 MDFIC-201ENST00000257724 4598 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
RNF11Q9Y3C5 ARL4C-202ENST00000390645 4013 ntAPPRIS P1 BASIC16.78■□□□□ 0.28
RNF11Q9Y3C5 ZFP64-205ENST00000371518 1841 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
RNF11Q9Y3C5 WRAP53-203ENST00000431639 1818 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
RNF11Q9Y3C5 WRAP53-204ENST00000457584 1828 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
RNF11Q9Y3C5 REPS2-201ENST00000303843 7771 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
RNF11Q9Y3C5 PXMP4-201ENST00000217398 979 ntTSL 2 BASIC16.78■□□□□ 0.28
RNF11Q9Y3C5 NXPH2-201ENST00000272641 1052 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
RNF11Q9Y3C5 UBE2J2-204ENST00000400929 1057 ntTSL 3 BASIC16.78■□□□□ 0.28
RNF11Q9Y3C5 ISOC2-202ENST00000425675 998 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
RNF11Q9Y3C5 AC068134.1-202ENST00000439072 356 ntTSL 5 BASIC16.78■□□□□ 0.28
RNF11Q9Y3C5 C16orf91-201ENST00000442039 978 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
RNF11Q9Y3C5 ENO1-AS1-201ENST00000442636 456 ntTSL 2 BASIC16.78■□□□□ 0.28
RNF11Q9Y3C5 NKTR-203ENST00000442970 646 ntTSL 2 BASIC16.78■□□□□ 0.28
RNF11Q9Y3C5 AC074051.2-201ENST00000565115 352 ntBASIC16.78■□□□□ 0.28
RNF11Q9Y3C5 ZNF575-205ENST00000601282 1086 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
RNF11Q9Y3C5 KISS1R-203ENST00000606939 964 ntTSL 5 BASIC16.78■□□□□ 0.28
RNF11Q9Y3C5 NPAP1P7-201ENST00000613027 823 ntBASIC16.78■□□□□ 0.28
RNF11Q9Y3C5 CYP1B1-AS1-214ENST00000620177 554 ntTSL 4 BASIC16.78■□□□□ 0.28
RNF11Q9Y3C5 PIR-202ENST00000380421 1539 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
RNF11Q9Y3C5 SQOR-208ENST00000568606 1792 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
RNF11Q9Y3C5 DYDC2-202ENST00000372197 2022 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
RNF11Q9Y3C5 FLJ31104-201ENST00000500093 2289 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
RNF11Q9Y3C5 PGAP3-203ENST00000378011 2533 ntTSL 2 BASIC16.78■□□□□ 0.28
RNF11Q9Y3C5 GMIP-204ENST00000587238 2987 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
RNF11Q9Y3C5 FAM178B-204ENST00000490605 2710 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
RNF11Q9Y3C5 ANXA8-202ENST00000583448 1971 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
RNF11Q9Y3C5 OTUD5-204ENST00000428668 1493 ntTSL 2 BASIC16.78■□□□□ 0.28
RNF11Q9Y3C5 SYBU-209ENST00000446070 2919 ntAPPRIS P4 TSL 1 (best) BASIC16.78■□□□□ 0.28
RNF11Q9Y3C5 UBE3D-203ENST00000369747 1917 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
RNF11Q9Y3C5 SCUBE2-207ENST00000520467 3148 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
RNF11Q9Y3C5 DUSP4-201ENST00000240100 5537 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
RNF11Q9Y3C5 NPRL3-211ENST00000611875 2881 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
RNF11Q9Y3C5 KCNQ2-215ENST00000629241 2853 ntTSL 5 BASIC16.78■□□□□ 0.28
RNF11Q9Y3C5 DAGLB-204ENST00000436575 2385 ntTSL 2 BASIC16.78■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 42.5 ms