Protein–RNA interactions for Protein: Q9Y2W7

KCNIP3, Calsenilin, humanhuman

Predictions only

Length 256 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNIP3Q9Y2W7 AQP12B-201ENST00000407834 1094 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
KCNIP3Q9Y2W7 SMIM19-201ENST00000414154 793 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
KCNIP3Q9Y2W7 SHBG-203ENST00000416273 1042 ntAPPRIS ALT2 TSL 3 BASIC14.43□□□□□ -0.1
KCNIP3Q9Y2W7 AL162231.1-203ENST00000416454 465 ntAPPRIS ALT2 TSL 2 BASIC14.43□□□□□ -0.1
KCNIP3Q9Y2W7 CHCHD10-202ENST00000484558 1171 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
KCNIP3Q9Y2W7 MLF2-210ENST00000542154 838 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
KCNIP3Q9Y2W7 EMC9-206ENST00000560403 872 ntTSL 2 BASIC14.43□□□□□ -0.1
KCNIP3Q9Y2W7 AL512604.3-201ENST00000569583 964 ntBASIC14.43□□□□□ -0.1
KCNIP3Q9Y2W7 SHBG-215ENST00000575903 1196 ntTSL 3 BASIC14.43□□□□□ -0.1
KCNIP3Q9Y2W7 AC011446.2-202ENST00000592882 756 ntTSL 3 BASIC14.43□□□□□ -0.1
KCNIP3Q9Y2W7 TRAPPC5-203ENST00000595985 411 ntTSL 3 BASIC14.43□□□□□ -0.1
KCNIP3Q9Y2W7 AC003005.1-201ENST00000601674 582 ntAPPRIS P5 TSL 2 BASIC14.43□□□□□ -0.1
KCNIP3Q9Y2W7 MARCH4-201ENST00000273067 4447 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
KCNIP3Q9Y2W7 OSBPL1A-203ENST00000399441 1887 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
KCNIP3Q9Y2W7 APAF1-201ENST00000333991 4539 ntTSL 5 BASIC14.43□□□□□ -0.1
KCNIP3Q9Y2W7 AC125494.1-203ENST00000396799 1622 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
KCNIP3Q9Y2W7 PAX4-204ENST00000463946 1613 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
KCNIP3Q9Y2W7 NR4A3-201ENST00000330847 4982 ntAPPRIS P4 TSL 5 BASIC14.43□□□□□ -0.1
KCNIP3Q9Y2W7 FRS2-206ENST00000549921 1952 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
KCNIP3Q9Y2W7 PKN3-201ENST00000291906 3375 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
KCNIP3Q9Y2W7 ZCCHC3-201ENST00000500893 3354 ntAPPRIS P1 BASIC14.43□□□□□ -0.1
KCNIP3Q9Y2W7 ZFC3H1-211ENST00000552037 1484 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
KCNIP3Q9Y2W7 KRT89P-201ENST00000620027 1478 ntBASIC14.43□□□□□ -0.1
KCNIP3Q9Y2W7 DGKE-204ENST00000572810 1843 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
KCNIP3Q9Y2W7 SLC25A45-201ENST00000294187 2196 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
KCNIP3Q9Y2W7 NDUFA11-205ENST00000592634 2154 ntTSL 2 BASIC14.43□□□□□ -0.1
KCNIP3Q9Y2W7 MYH11-211ENST00000576790 6272 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
KCNIP3Q9Y2W7 SURF4-209ENST00000618229 3200 ntTSL 2 BASIC14.43□□□□□ -0.1
KCNIP3Q9Y2W7 UGT3A2-204ENST00000513300 1924 ntTSL 2 BASIC14.43□□□□□ -0.1
KCNIP3Q9Y2W7 WDR33-201ENST00000322313 9471 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
KCNIP3Q9Y2W7 MAP3K1-201ENST00000399503 7011 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
KCNIP3Q9Y2W7 FHL1-207ENST00000394155 2706 ntTSL 5 BASIC14.43□□□□□ -0.1
KCNIP3Q9Y2W7 ASH2L-212ENST00000545394 2808 ntTSL 2 BASIC14.42□□□□□ -0.1
KCNIP3Q9Y2W7 SLC6A2-209ENST00000568943 2471 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
KCNIP3Q9Y2W7 TMC7-201ENST00000304381 3640 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
KCNIP3Q9Y2W7 SEMA3B-213ENST00000618865 2925 ntAPPRIS P3 TSL 5 BASIC14.42□□□□□ -0.1
KCNIP3Q9Y2W7 ABCC1-201ENST00000399408 6594 ntTSL 5 BASIC14.42□□□□□ -0.1
KCNIP3Q9Y2W7 ABCC1-202ENST00000399410 6552 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
KCNIP3Q9Y2W7 LINC02551-202ENST00000533812 2203 ntTSL 5 BASIC14.42□□□□□ -0.1
KCNIP3Q9Y2W7 ZNRF3-201ENST00000402174 2667 ntAPPRIS P3 TSL 2 BASIC14.42□□□□□ -0.1
KCNIP3Q9Y2W7 NUP50-202ENST00000396096 1895 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
KCNIP3Q9Y2W7 AGK-211ENST00000629555 2765 ntTSL 5 BASIC14.42□□□□□ -0.1
KCNIP3Q9Y2W7 VSIG10-202ENST00000359236 4946 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
KCNIP3Q9Y2W7 AL109955.1-201ENST00000417346 1540 ntTSL 2 BASIC14.42□□□□□ -0.1
KCNIP3Q9Y2W7 KDM2B-201ENST00000377069 5224 ntAPPRIS ALT2 TSL 2 BASIC14.42□□□□□ -0.1
KCNIP3Q9Y2W7 ADCY1-204ENST00000621543 1647 ntTSL 5 BASIC14.42□□□□□ -0.1
KCNIP3Q9Y2W7 MAGEA4-206ENST00000393921 1727 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
KCNIP3Q9Y2W7 TLE2-201ENST00000262953 2705 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
KCNIP3Q9Y2W7 FAM178B-204ENST00000490605 2710 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
KCNIP3Q9Y2W7 LINC02199-201ENST00000506655 2702 ntBASIC14.42□□□□□ -0.1
KCNIP3Q9Y2W7 PTPN9-206ENST00000618819 7813 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
KCNIP3Q9Y2W7 UNC93B2-201ENST00000285383 730 ntBASIC14.42□□□□□ -0.1
KCNIP3Q9Y2W7 ABHD17AP1-201ENST00000358206 933 ntBASIC14.42□□□□□ -0.1
KCNIP3Q9Y2W7 F8A2-201ENST00000369505 1116 ntAPPRIS P1 BASIC14.42□□□□□ -0.1
KCNIP3Q9Y2W7 DAB1-202ENST00000371230 1150 ntTSL 5 BASIC14.42□□□□□ -0.1
KCNIP3Q9Y2W7 NDUFA1-201ENST00000371437 766 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
KCNIP3Q9Y2W7 TNNT3-206ENST00000381579 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
KCNIP3Q9Y2W7 CBLN3-202ENST00000555436 718 ntTSL 3 BASIC14.42□□□□□ -0.1
KCNIP3Q9Y2W7 AC011498.3-201ENST00000590159 569 ntTSL 4 BASIC14.42□□□□□ -0.1
KCNIP3Q9Y2W7 KLK7-206ENST00000597707 1054 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
KCNIP3Q9Y2W7 DNAAF2-202ENST00000406043 2819 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
KCNIP3Q9Y2W7 PCCB-201ENST00000251654 1833 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
KCNIP3Q9Y2W7 BCAT2-202ENST00000402551 2041 ntTSL 2 BASIC14.42□□□□□ -0.1
KCNIP3Q9Y2W7 AL513523.2-202ENST00000427283 2040 ntBASIC14.42□□□□□ -0.1
KCNIP3Q9Y2W7 RIMS3-202ENST00000372684 7235 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
KCNIP3Q9Y2W7 SIK1-201ENST00000270162 4712 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
KCNIP3Q9Y2W7 CU639417.2-201ENST00000613488 4705 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
KCNIP3Q9Y2W7 AKT1-214ENST00000555528 3066 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
KCNIP3Q9Y2W7 PITPNM1-202ENST00000436757 4216 ntAPPRIS ALT1 TSL 1 (best) BASIC14.42□□□□□ -0.1
KCNIP3Q9Y2W7 ADAM15-205ENST00000360674 2732 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
KCNIP3Q9Y2W7 TGOLN2-203ENST00000398263 6138 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
KCNIP3Q9Y2W7 SLC3A2-203ENST00000377890 2161 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
KCNIP3Q9Y2W7 ART1-201ENST00000250693 1312 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
KCNIP3Q9Y2W7 BEND4-203ENST00000611697 1348 ntTSL 2 BASIC14.41□□□□□ -0.1
KCNIP3Q9Y2W7 USP43-201ENST00000285199 4169 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
KCNIP3Q9Y2W7 WNT5B-203ENST00000537031 1437 ntAPPRIS P1 TSL 2 BASIC14.41□□□□□ -0.1
KCNIP3Q9Y2W7 NGFR-201ENST00000172229 3417 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
KCNIP3Q9Y2W7 RHOV-201ENST00000220507 1705 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
KCNIP3Q9Y2W7 RORA-204ENST00000449337 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
KCNIP3Q9Y2W7 MAP3K7CL-206ENST00000399928 1904 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
KCNIP3Q9Y2W7 RDH13-223ENST00000610356 1931 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
KCNIP3Q9Y2W7 ZSCAN2-214ENST00000546148 2242 ntAPPRIS P2 TSL 2 BASIC14.41□□□□□ -0.1
KCNIP3Q9Y2W7 MINDY2-203ENST00000559228 9238 ntAPPRIS P3 TSL 2 BASIC14.41□□□□□ -0.1
KCNIP3Q9Y2W7 AL136379.1-201ENST00000623471 2642 ntBASIC14.41□□□□□ -0.1
KCNIP3Q9Y2W7 HELZ2-204ENST00000467148 8064 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
KCNIP3Q9Y2W7 PLPPR2-201ENST00000251473 2727 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
KCNIP3Q9Y2W7 MAPK7-201ENST00000299612 2715 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
KCNIP3Q9Y2W7 TRIM7-201ENST00000274773 2840 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
KCNIP3Q9Y2W7 APPL1-201ENST00000288266 6058 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
KCNIP3Q9Y2W7 KLK14-201ENST00000156499 1060 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
KCNIP3Q9Y2W7 BUD23-201ENST00000265758 1230 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
KCNIP3Q9Y2W7 BID-202ENST00000342111 854 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
KCNIP3Q9Y2W7 KLK14-202ENST00000391802 1133 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
KCNIP3Q9Y2W7 AC090192.1-201ENST00000517740 490 ntBASIC14.41□□□□□ -0.1
KCNIP3Q9Y2W7 PDXDC2P-202ENST00000527016 543 ntTSL 3 BASIC14.41□□□□□ -0.1
KCNIP3Q9Y2W7 AC124947.2-201ENST00000547118 1133 ntBASIC14.41□□□□□ -0.1
KCNIP3Q9Y2W7 C2orf69P3-201ENST00000565542 1120 ntBASIC14.41□□□□□ -0.1
KCNIP3Q9Y2W7 SPAG7-207ENST00000575142 1094 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
KCNIP3Q9Y2W7 AC024563.2-201ENST00000603282 481 ntBASIC14.41□□□□□ -0.1
KCNIP3Q9Y2W7 AC009154.2-201ENST00000621177 724 ntBASIC14.41□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 57.8 ms