Protein–RNA interactions for Protein: Q9Y2J0

RPH3A, Rabphilin-3A, humanhuman

Predicted RBP Predictions only

Length 694 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPH3AQ9Y2J0 SLCO4A1-AS1-202ENST00000433126 1420 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
RPH3AQ9Y2J0 HNRNPDP1-201ENST00000439535 754 ntBASIC15.81■□□□□ 0.12
RPH3AQ9Y2J0 LRRFIP2-209ENST00000440230 1989 ntTSL 5 BASIC15.81■□□□□ 0.12
RPH3AQ9Y2J0 SGCE-206ENST00000445866 1666 ntTSL 5 BASIC15.81■□□□□ 0.12
RPH3AQ9Y2J0 SIGLEC30P-201ENST00000455569 941 ntBASIC15.81■□□□□ 0.12
RPH3AQ9Y2J0 C16orf89-202ENST00000472572 1444 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
RPH3AQ9Y2J0 RSRC1-211ENST00000480820 1410 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
RPH3AQ9Y2J0 KNCN-203ENST00000481882 1037 ntAPPRIS ALT2 TSL 5 BASIC15.81■□□□□ 0.12
RPH3AQ9Y2J0 SLC34A2-202ENST00000503434 2174 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
RPH3AQ9Y2J0 ISCU-205ENST00000535729 1330 ntTSL 2 BASIC15.81■□□□□ 0.12
RPH3AQ9Y2J0 CRTC3-208ENST00000560098 1421 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
RPH3AQ9Y2J0 MAP1LC3B-207ENST00000565788 625 ntTSL 2 BASIC15.81■□□□□ 0.12
RPH3AQ9Y2J0 RNF151-202ENST00000569210 853 ntTSL 2 BASIC15.81■□□□□ 0.12
RPH3AQ9Y2J0 PNMT-203ENST00000581428 677 ntTSL 2 BASIC15.81■□□□□ 0.12
RPH3AQ9Y2J0 CYB561-217ENST00000582997 877 ntTSL 5 BASIC15.81■□□□□ 0.12
RPH3AQ9Y2J0 SLC7A9-204ENST00000590341 1752 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
RPH3AQ9Y2J0 SLCO6A1-201ENST00000379807 2437 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
RPH3AQ9Y2J0 LYSMD4-203ENST00000378904 2122 ntBASIC15.8■□□□□ 0.12
RPH3AQ9Y2J0 KRT79-201ENST00000330553 2068 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
RPH3AQ9Y2J0 SLC22A1-202ENST00000366963 1948 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
RPH3AQ9Y2J0 ELOA3-201ENST00000330682 1877 ntAPPRIS P1 BASIC15.8■□□□□ 0.12
RPH3AQ9Y2J0 NR2F1-201ENST00000327111 3732 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
RPH3AQ9Y2J0 TMEM145-201ENST00000301204 1768 ntAPPRIS P2 TSL 2 BASIC15.8■□□□□ 0.12
RPH3AQ9Y2J0 PDE9A-203ENST00000335440 1728 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
RPH3AQ9Y2J0 GBA2-201ENST00000378088 1672 ntTSL 2 BASIC15.8■□□□□ 0.12
RPH3AQ9Y2J0 ZNF140-207ENST00000440550 1663 ntTSL 2 BASIC15.8■□□□□ 0.12
RPH3AQ9Y2J0 MTG1-201ENST00000317502 1560 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
RPH3AQ9Y2J0 NANS-201ENST00000210444 1170 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
RPH3AQ9Y2J0 SMIM29-201ENST00000335352 1160 ntTSL 2 BASIC15.8■□□□□ 0.12
RPH3AQ9Y2J0 DPM3-201ENST00000341298 486 ntAPPRIS P1 TSL 2 BASIC15.8■□□□□ 0.12
RPH3AQ9Y2J0 OPN1LW-201ENST00000369951 1261 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
RPH3AQ9Y2J0 GLIPR1L1-202ENST00000378695 885 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
RPH3AQ9Y2J0 AL031284.1-201ENST00000419297 478 ntBASIC15.8■□□□□ 0.12
RPH3AQ9Y2J0 PRSS21-202ENST00000450020 1106 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
RPH3AQ9Y2J0 AC034213.1-201ENST00000507681 806 ntTSL 3 BASIC15.8■□□□□ 0.12
RPH3AQ9Y2J0 AC010226.1-202ENST00000508517 539 ntTSL 2 BASIC15.8■□□□□ 0.12
RPH3AQ9Y2J0 AMACR-208ENST00000512079 858 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
RPH3AQ9Y2J0 OR7E14P-202ENST00000530490 1290 ntBASIC15.8■□□□□ 0.12
RPH3AQ9Y2J0 AC025062.2-201ENST00000605477 670 ntBASIC15.8■□□□□ 0.12
RPH3AQ9Y2J0 AL139327.4-201ENST00000612362 153 ntBASIC15.8■□□□□ 0.12
RPH3AQ9Y2J0 ABBA01031661.1-201ENST00000634362 1253 ntBASIC15.8■□□□□ 0.12
RPH3AQ9Y2J0 CDK11A-203ENST00000357760 2446 ntAPPRIS ALT1 TSL 1 (best) BASIC15.8■□□□□ 0.12
RPH3AQ9Y2J0 CDK11A-204ENST00000358779 2419 ntAPPRIS ALT1 TSL 1 (best) BASIC15.8■□□□□ 0.12
RPH3AQ9Y2J0 CDK11A-206ENST00000378638 2429 ntTSL 5 BASIC15.8■□□□□ 0.12
RPH3AQ9Y2J0 C1orf159-204ENST00000379339 2429 ntAPPRIS ALT2 TSL 2 BASIC15.8■□□□□ 0.12
RPH3AQ9Y2J0 CDK11A-208ENST00000404249 2449 ntAPPRIS P4 TSL 1 (best) BASIC15.8■□□□□ 0.12
RPH3AQ9Y2J0 KIF16B-203ENST00000408042 4640 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
RPH3AQ9Y2J0 SLC30A2-202ENST00000374278 3097 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
RPH3AQ9Y2J0 ZBTB7C-221ENST00000590800 4947 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
RPH3AQ9Y2J0 PP7080-201ENST00000342584 1876 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
RPH3AQ9Y2J0 MFSD14A-201ENST00000370152 2777 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
RPH3AQ9Y2J0 AC046185.3-201ENST00000623228 1824 ntBASIC15.8■□□□□ 0.12
RPH3AQ9Y2J0 IFFO1-201ENST00000336604 2686 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
RPH3AQ9Y2J0 MAP3K9-206ENST00000555993 4449 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
RPH3AQ9Y2J0 RABGAP1L-204ENST00000357444 2605 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
RPH3AQ9Y2J0 CDH24-204ENST00000487137 3438 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
RPH3AQ9Y2J0 UBAP1-203ENST00000379186 2524 ntTSL 5 BASIC15.79■□□□□ 0.12
RPH3AQ9Y2J0 SLC2A5-201ENST00000377414 2344 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
RPH3AQ9Y2J0 PLTP-202ENST00000372420 1530 ntTSL 2 BASIC15.79■□□□□ 0.12
RPH3AQ9Y2J0 GPER1-204ENST00000401670 1542 ntAPPRIS P1 TSL 2 BASIC15.79■□□□□ 0.12
RPH3AQ9Y2J0 MIF4GD-204ENST00000577542 1531 ntTSL 3 BASIC15.79■□□□□ 0.12
RPH3AQ9Y2J0 LRCH3-201ENST00000334859 2258 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
RPH3AQ9Y2J0 TMEM45B-201ENST00000281441 2234 ntAPPRIS P1 TSL 2 BASIC15.79■□□□□ 0.12
RPH3AQ9Y2J0 SIGLEC16-201ENST00000599858 1437 ntBASIC15.79■□□□□ 0.12
RPH3AQ9Y2J0 NFATC2-206ENST00000609943 5690 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
RPH3AQ9Y2J0 GTPBP8-203ENST00000383678 1360 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
RPH3AQ9Y2J0 IRF5-210ENST00000477535 1374 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
RPH3AQ9Y2J0 ADPGK-AS1-201ENST00000563592 2730 ntTSL 2 BASIC15.79■□□□□ 0.12
RPH3AQ9Y2J0 HNRNPDL-210ENST00000630827 1318 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
RPH3AQ9Y2J0 CMTM3-214ENST00000567572 1934 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
RPH3AQ9Y2J0 TSPY2-201ENST00000320701 1161 ntAPPRIS P5 TSL 1 (best) BASIC15.79■□□□□ 0.12
RPH3AQ9Y2J0 KLHL7-201ENST00000322275 969 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
RPH3AQ9Y2J0 POMC-203ENST00000395826 959 ntAPPRIS P1 TSL 2 BASIC15.79■□□□□ 0.12
RPH3AQ9Y2J0 TSPY2-203ENST00000429039 779 ntAPPRIS ALT2 TSL 2 BASIC15.79■□□□□ 0.12
RPH3AQ9Y2J0 AC018712.1-201ENST00000455767 687 ntBASIC15.79■□□□□ 0.12
RPH3AQ9Y2J0 AP001005.1-201ENST00000571755 1248 ntBASIC15.79■□□□□ 0.12
RPH3AQ9Y2J0 SDCCAG3P1-201ENST00000589292 1150 ntBASIC15.79■□□□□ 0.12
RPH3AQ9Y2J0 AL049840.3-201ENST00000602669 611 ntBASIC15.79■□□□□ 0.12
RPH3AQ9Y2J0 AC073592.4-201ENST00000623827 446 ntBASIC15.79■□□□□ 0.12
RPH3AQ9Y2J0 CBFB-202ENST00000412916 2971 ntAPPRIS ALT1 TSL 1 (best) BASIC15.79■□□□□ 0.12
RPH3AQ9Y2J0 PPM1M-202ENST00000323588 2193 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
RPH3AQ9Y2J0 PITHD1-201ENST00000246151 1603 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
RPH3AQ9Y2J0 SARS2-212ENST00000600042 1630 ntTSL 2 BASIC15.79■□□□□ 0.12
RPH3AQ9Y2J0 TFAP2A-AS1-201ENST00000420777 1575 ntTSL 5 BASIC15.79■□□□□ 0.12
RPH3AQ9Y2J0 CHAC1-204ENST00000617768 1560 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
RPH3AQ9Y2J0 BTBD3-201ENST00000254977 4686 ntAPPRIS ALT1 TSL 2 BASIC15.79■□□□□ 0.12
RPH3AQ9Y2J0 HTD2-201ENST00000461393 1508 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
RPH3AQ9Y2J0 ALKBH3-201ENST00000302708 1474 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
RPH3AQ9Y2J0 WDR90-202ENST00000315764 1454 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
RPH3AQ9Y2J0 TP73-AS1-203ENST00000423764 2875 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
RPH3AQ9Y2J0 SPAG1-201ENST00000251809 3748 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
RPH3AQ9Y2J0 MXRA8-209ENST00000477278 2728 ntTSL 5 BASIC15.78■□□□□ 0.12
RPH3AQ9Y2J0 HDAC10-201ENST00000216271 2687 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
RPH3AQ9Y2J0 CAP2-208ENST00000611958 2686 ntTSL 2 BASIC15.78■□□□□ 0.12
RPH3AQ9Y2J0 HTR1A-201ENST00000323865 1778 ntAPPRIS P1 BASIC15.78■□□□□ 0.12
RPH3AQ9Y2J0 FAM46A-201ENST00000320172 5609 ntAPPRIS P2 TSL 1 (best) BASIC15.78■□□□□ 0.12
RPH3AQ9Y2J0 GALNT17-201ENST00000333538 3884 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
RPH3AQ9Y2J0 MOGS-205ENST00000452063 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
RPH3AQ9Y2J0 UXT-202ENST00000335890 701 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
RPH3AQ9Y2J0 FAM99B-201ENST00000382166 1067 ntTSL 5 BASIC15.78■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 65.3 ms