Protein–RNA interactions for Protein: Q9UQP3

TNN, Tenascin-N, humanhuman

Predictions only

Length 1,299 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNNQ9UQP3 IGKV4-1-201ENST00000390243 538 ntAPPRIS P1 BASIC21.8■■□□□ 1.08
TNNQ9UQP3 AP002414.1-201ENST00000391405 1147 ntBASIC21.8■■□□□ 1.08
TNNQ9UQP3 AC073621.1-201ENST00000392730 636 ntBASIC21.8■■□□□ 1.08
TNNQ9UQP3 POMC-203ENST00000395826 959 ntAPPRIS P1 TSL 2 BASIC21.8■■□□□ 1.08
TNNQ9UQP3 CCDC74A-202ENST00000409856 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC21.8■■□□□ 1.08
TNNQ9UQP3 VPS13A-AS1-201ENST00000415172 519 ntTSL 2 BASIC21.8■■□□□ 1.08
TNNQ9UQP3 FAM197Y8-203ENST00000450145 560 ntBASIC21.8■■□□□ 1.08
TNNQ9UQP3 MOK-208ENST00000519058 917 ntTSL 2 BASIC21.8■■□□□ 1.08
TNNQ9UQP3 AP000688.1-201ENST00000535199 1221 ntTSL 2 BASIC21.8■■□□□ 1.08
TNNQ9UQP3 ATP5G2-204ENST00000549164 745 ntAPPRIS P1 TSL 3 BASIC21.8■■□□□ 1.08
TNNQ9UQP3 ATP5G2-209ENST00000602871 668 ntAPPRIS P1 TSL 2 BASIC21.8■■□□□ 1.08
TNNQ9UQP3 TCP11L2-201ENST00000299045 2219 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
TNNQ9UQP3 HTD2-201ENST00000461393 1508 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
TNNQ9UQP3 CEP76-202ENST00000423709 2197 ntTSL 2 BASIC21.8■■□□□ 1.08
TNNQ9UQP3 IRF1-202ENST00000405885 2061 ntAPPRIS P1 TSL 5 BASIC21.79■■□□□ 1.08
TNNQ9UQP3 RNF157-201ENST00000269391 4955 ntAPPRIS P3 TSL 1 (best) BASIC21.79■■□□□ 1.08
TNNQ9UQP3 CHKA-201ENST00000265689 2530 ntAPPRIS P4 TSL 1 (best) BASIC21.79■■□□□ 1.08
TNNQ9UQP3 NRXN2-202ENST00000301894 3535 ntTSL 5 BASIC21.79■■□□□ 1.08
TNNQ9UQP3 FSCN1-201ENST00000382361 2777 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
TNNQ9UQP3 FAM53B-AS1-202ENST00000448422 1491 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
TNNQ9UQP3 N4BP2L1-210ENST00000613078 2032 ntTSL 5 BASIC21.79■■□□□ 1.08
TNNQ9UQP3 NRG1-216ENST00000523079 2359 ntTSL 2 BASIC21.79■■□□□ 1.08
TNNQ9UQP3 NFKBIB-202ENST00000392079 991 ntTSL 5 BASIC21.79■■□□□ 1.08
TNNQ9UQP3 PTCHD3P3-201ENST00000403073 906 ntBASIC21.79■■□□□ 1.08
TNNQ9UQP3 AC009078.2-202ENST00000463353 338 ntBASIC21.79■■□□□ 1.08
TNNQ9UQP3 TNFSF13-208ENST00000483039 959 ntTSL 2 BASIC21.79■■□□□ 1.08
TNNQ9UQP3 RNA5SP419-201ENST00000515908 135 ntBASIC21.79■■□□□ 1.08
TNNQ9UQP3 MIR22HG-204ENST00000571595 767 ntTSL 5 BASIC21.79■■□□□ 1.08
TNNQ9UQP3 PRSS16-201ENST00000230582 2716 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
TNNQ9UQP3 AGPAT3-201ENST00000291572 5546 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
TNNQ9UQP3 LHX9-204ENST00000367391 1623 ntTSL 5 BASIC21.79■■□□□ 1.08
TNNQ9UQP3 AL021453.1-201ENST00000333487 2989 ntTSL 2 BASIC21.79■■□□□ 1.08
TNNQ9UQP3 RAPGEFL1-212ENST00000620260 3855 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
TNNQ9UQP3 BAIAP2-205ENST00000435091 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC21.79■■□□□ 1.08
TNNQ9UQP3 SETD3-201ENST00000329331 1330 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
TNNQ9UQP3 SUZ12-204ENST00000580398 3977 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
TNNQ9UQP3 LMF1-201ENST00000262301 2621 ntAPPRIS P1 TSL 5 BASIC21.78■■□□□ 1.08
TNNQ9UQP3 CELF6-201ENST00000287202 3345 ntAPPRIS P3 TSL 1 (best) BASIC21.78■■□□□ 1.08
TNNQ9UQP3 PRPF31-203ENST00000419967 2269 ntTSL 5 BASIC21.78■■□□□ 1.08
TNNQ9UQP3 PCDHA14-201ENST00000506751 2298 ntBASIC21.78■■□□□ 1.08
TNNQ9UQP3 NOMO1-208ENST00000620755 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC21.78■■□□□ 1.08
TNNQ9UQP3 RNF112-201ENST00000461366 3212 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
TNNQ9UQP3 HS6ST2-203ENST00000406696 1818 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
TNNQ9UQP3 C1QTNF1-202ENST00000339142 3100 ntAPPRIS P1 TSL 5 BASIC21.78■■□□□ 1.08
TNNQ9UQP3 ULK1-201ENST00000321867 5310 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
TNNQ9UQP3 SGPP1-201ENST00000247225 3312 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
TNNQ9UQP3 GOSR2-201ENST00000225567 1245 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
TNNQ9UQP3 RAB17-203ENST00000409576 466 ntTSL 3 BASIC21.78■■□□□ 1.08
TNNQ9UQP3 MYCNOS-201ENST00000419083 770 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
TNNQ9UQP3 ODF3B-205ENST00000428989 762 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
TNNQ9UQP3 NXNL2-205ENST00000618633 739 ntTSL 5 BASIC21.78■■□□□ 1.08
TNNQ9UQP3 AC107918.4-202ENST00000641623 219 ntBASIC21.78■■□□□ 1.08
TNNQ9UQP3 CDH23-212ENST00000616684 4814 ntTSL 5 BASIC21.78■■□□□ 1.08
TNNQ9UQP3 NAIF1-201ENST00000373078 3399 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
TNNQ9UQP3 PKM-216ENST00000565184 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC21.78■■□□□ 1.08
TNNQ9UQP3 LTBR-207ENST00000539925 1665 ntAPPRIS ALT2 TSL 2 BASIC21.78■■□□□ 1.08
TNNQ9UQP3 GDPD5-214ENST00000533784 2441 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
TNNQ9UQP3 MAP4K1-201ENST00000396857 2653 ntAPPRIS P1 TSL 5 BASIC21.78■■□□□ 1.08
TNNQ9UQP3 ACSM2A-213ENST00000575690 2322 ntAPPRIS P1 TSL 2 BASIC21.78■■□□□ 1.08
TNNQ9UQP3 HOXC5-201ENST00000312492 1805 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
TNNQ9UQP3 PUF60-201ENST00000313352 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC21.78■■□□□ 1.08
TNNQ9UQP3 SDR39U1-206ENST00000553930 1325 ntTSL 5 BASIC21.78■■□□□ 1.08
TNNQ9UQP3 CHAT-201ENST00000337653 2458 ntAPPRIS P4 TSL 1 (best) BASIC21.78■■□□□ 1.08
TNNQ9UQP3 ETV3L-201ENST00000454449 1976 ntAPPRIS P1 TSL 2 BASIC21.78■■□□□ 1.08
TNNQ9UQP3 TTLL5-219ENST00000556977 1961 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
TNNQ9UQP3 AC083864.1-201ENST00000381493 1497 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
TNNQ9UQP3 SLC38A11-202ENST00000409058 1647 ntAPPRIS ALT2 TSL 5 BASIC21.77■■□□□ 1.08
TNNQ9UQP3 FLYWCH1-201ENST00000253928 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC21.77■■□□□ 1.08
TNNQ9UQP3 NECTIN1-201ENST00000264025 5840 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
TNNQ9UQP3 WDR90-201ENST00000293879 5488 ntAPPRIS P2 TSL 5 BASIC21.77■■□□□ 1.08
TNNQ9UQP3 CDIPT-209ENST00000569956 1532 ntAPPRIS P1 TSL 5 BASIC21.77■■□□□ 1.08
TNNQ9UQP3 MOCS1-206ENST00000425303 1920 ntTSL 2 BASIC21.77■■□□□ 1.08
TNNQ9UQP3 MYCL-203ENST00000397332 3256 ntAPPRIS ALT2 TSL 1 (best) BASIC21.77■■□□□ 1.08
TNNQ9UQP3 SLX1A-202ENST00000345535 762 ntAPPRIS ALT2 TSL 1 (best) BASIC21.77■■□□□ 1.08
TNNQ9UQP3 SLX1B-202ENST00000351581 762 ntAPPRIS ALT2 TSL 1 (best) BASIC21.77■■□□□ 1.08
TNNQ9UQP3 KRT18P27-201ENST00000427733 1299 ntBASIC21.77■■□□□ 1.08
TNNQ9UQP3 RMDN1-202ENST00000430676 1106 ntTSL 2 BASIC21.77■■□□□ 1.08
TNNQ9UQP3 MPIG6B-210ENST00000480039 790 ntAPPRIS ALT2 TSL 1 (best) BASIC21.77■■□□□ 1.08
TNNQ9UQP3 AP002469.2-201ENST00000531724 424 ntBASIC21.77■■□□□ 1.08
TNNQ9UQP3 AC135586.2-201ENST00000537262 567 ntAPPRIS P1 TSL 4 BASIC21.77■■□□□ 1.08
TNNQ9UQP3 DHRS4-205ENST00000558263 1089 ntTSL 5 BASIC21.77■■□□□ 1.08
TNNQ9UQP3 DHRS4L2-207ENST00000558753 556 ntTSL 2 BASIC21.77■■□□□ 1.08
TNNQ9UQP3 MIR7706-201ENST00000613747 67 ntBASIC21.77■■□□□ 1.08
TNNQ9UQP3 AL589182.2-201ENST00000619332 1049 ntBASIC21.77■■□□□ 1.08
TNNQ9UQP3 ITGA7-201ENST00000257879 4120 ntAPPRIS P3 TSL 1 (best) BASIC21.77■■□□□ 1.08
TNNQ9UQP3 POMT1-208ENST00000423007 3320 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
TNNQ9UQP3 DMKN-209ENST00000429837 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC21.77■■□□□ 1.08
TNNQ9UQP3 TOM1-210ENST00000449058 2389 ntAPPRIS P3 TSL 1 (best) BASIC21.77■■□□□ 1.08
TNNQ9UQP3 C16orf89-202ENST00000472572 1444 ntAPPRIS ALT2 TSL 1 (best) BASIC21.77■■□□□ 1.08
TNNQ9UQP3 LY6E-207ENST00000520466 1419 ntAPPRIS P2 TSL 2 BASIC21.77■■□□□ 1.08
TNNQ9UQP3 EIF4A3-201ENST00000269349 1734 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
TNNQ9UQP3 PHF12-202ENST00000332830 4759 ntAPPRIS P1 TSL 2 BASIC21.77■■□□□ 1.08
TNNQ9UQP3 TMEM216-201ENST00000334888 1306 ntAPPRIS ALT2 TSL 2 BASIC21.77■■□□□ 1.07
TNNQ9UQP3 PRMT1-202ENST00000454376 1327 ntTSL 1 (best) BASIC21.77■■□□□ 1.07
TNNQ9UQP3 ZNF133-204ENST00000396026 2717 ntAPPRIS P3 TSL 3 BASIC21.77■■□□□ 1.07
TNNQ9UQP3 SLC29A4-202ENST00000396872 5685 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.07
TNNQ9UQP3 JPT1-209ENST00000482348 1614 ntTSL 1 (best) BASIC21.77■■□□□ 1.07
TNNQ9UQP3 EEPD1-201ENST00000242108 4765 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
TNNQ9UQP3 KRT86-201ENST00000293525 2091 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
TNNQ9UQP3 BAG5-201ENST00000299204 4848 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Retrieved 100 of 98,524 protein–RNA pairs in 6.9 ms