Protein–RNA interactions for Protein: Q9UIS9

MBD1, Methyl-CpG-binding domain protein 1, humanhuman

Predicted RBP Predictions only

Length 605 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MBD1Q9UIS9 NSL1-203ENST00000366978 1344 ntTSL 2 BASIC17.24■□□□□ 0.35
MBD1Q9UIS9 RMND5A-201ENST00000283632 6301 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
MBD1Q9UIS9 GCDH-201ENST00000222214 1956 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
MBD1Q9UIS9 SLC39A13-213ENST00000533076 1805 ntTSL 2 BASIC17.24■□□□□ 0.35
MBD1Q9UIS9 LINC00921-202ENST00000573951 2468 ntTSL 2 BASIC17.24■□□□□ 0.35
MBD1Q9UIS9 HNRNPM-217ENST00000620401 2458 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
MBD1Q9UIS9 KRT79-201ENST00000330553 2068 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
MBD1Q9UIS9 SNAI3-AS1-202ENST00000563475 2081 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
MBD1Q9UIS9 CBR1-202ENST00000399191 838 ntTSL 3 BASIC17.24■□□□□ 0.35
MBD1Q9UIS9 LINC01640-201ENST00000452505 550 ntTSL 4 BASIC17.24■□□□□ 0.35
MBD1Q9UIS9 OR10S1-201ENST00000531945 1121 ntAPPRIS P2 BASIC17.24■□□□□ 0.35
MBD1Q9UIS9 DAD1-205ENST00000543337 501 ntTSL 3 BASIC17.24■□□□□ 0.35
MBD1Q9UIS9 AC005606.1-201ENST00000567515 504 ntTSL 5 BASIC17.24■□□□□ 0.35
MBD1Q9UIS9 LSM12-202ENST00000585388 942 ntTSL 3 BASIC17.24■□□□□ 0.35
MBD1Q9UIS9 HNRNPDL-206ENST00000602300 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
MBD1Q9UIS9 ACTL9-202ENST00000612068 1252 ntBASIC17.24■□□□□ 0.35
MBD1Q9UIS9 OR10S1-202ENST00000641123 1121 ntAPPRIS ALT2 BASIC17.24■□□□□ 0.35
MBD1Q9UIS9 BCL2L11-201ENST00000308659 1522 ntAPPRIS ALT2 TSL 2 BASIC17.24■□□□□ 0.35
MBD1Q9UIS9 RAI2-203ENST00000415486 2037 ntTSL 2 BASIC17.24■□□□□ 0.35
MBD1Q9UIS9 TES-201ENST00000358204 2782 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
MBD1Q9UIS9 TMEM177-201ENST00000272521 1394 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
MBD1Q9UIS9 TSNARE1-204ENST00000519651 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
MBD1Q9UIS9 ULK1-201ENST00000321867 5310 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
MBD1Q9UIS9 NARFL-218ENST00000568545 2486 ntTSL 2 BASIC17.24■□□□□ 0.35
MBD1Q9UIS9 NOL4-211ENST00000589544 2221 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
MBD1Q9UIS9 TMEM59L-205ENST00000600490 1717 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
MBD1Q9UIS9 IGSF11-209ENST00000491903 1487 ntTSL 2 BASIC17.24■□□□□ 0.35
MBD1Q9UIS9 SNX17-210ENST00000537606 2400 ntTSL 2 BASIC17.23■□□□□ 0.35
MBD1Q9UIS9 TFAP2E-201ENST00000373235 2189 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
MBD1Q9UIS9 CLN6-202ENST00000538696 1343 ntTSL 2 BASIC17.23■□□□□ 0.35
MBD1Q9UIS9 RIMBP3B-201ENST00000620804 6105 ntAPPRIS P1 BASIC17.23■□□□□ 0.35
MBD1Q9UIS9 PAAF1-205ENST00000535604 1695 ntTSL 5 BASIC17.23■□□□□ 0.35
MBD1Q9UIS9 TMEFF2-201ENST00000272771 2604 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
MBD1Q9UIS9 STRN4-204ENST00000539396 2608 ntTSL 2 BASIC17.23■□□□□ 0.35
MBD1Q9UIS9 TXNRD2-218ENST00000542719 2024 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
MBD1Q9UIS9 CDK16-223ENST00000622098 2968 ntTSL 2 BASIC17.23■□□□□ 0.35
MBD1Q9UIS9 ABCC3-202ENST00000427699 1881 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
MBD1Q9UIS9 AP005717.1-201ENST00000500705 1899 ntTSL 5 BASIC17.23■□□□□ 0.35
MBD1Q9UIS9 CCDC144A-210ENST00000456009 2306 ntTSL 5 BASIC17.23■□□□□ 0.35
MBD1Q9UIS9 OGG1-206ENST00000349503 1950 ntTSL 5 BASIC17.23■□□□□ 0.35
MBD1Q9UIS9 LINC00029-202ENST00000414668 1117 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
MBD1Q9UIS9 ITGA9-AS1-209ENST00000450990 562 ntTSL 4 BASIC17.23■□□□□ 0.35
MBD1Q9UIS9 ITGB1BP1-205ENST00000456913 1043 ntTSL 2 BASIC17.23■□□□□ 0.35
MBD1Q9UIS9 CD99L2-206ENST00000466436 988 ntAPPRIS P4 TSL 1 (best) BASIC17.23■□□□□ 0.35
MBD1Q9UIS9 GSTK1-207ENST00000479303 1185 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
MBD1Q9UIS9 ITGB1BP1-216ENST00000488451 874 ntTSL 3 BASIC17.23■□□□□ 0.35
MBD1Q9UIS9 AC004408.1-201ENST00000579256 573 ntTSL 4 BASIC17.23■□□□□ 0.35
MBD1Q9UIS9 TBX18-206ENST00000606784 1230 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
MBD1Q9UIS9 AL096865.1-201ENST00000606796 927 ntBASIC17.23■□□□□ 0.35
MBD1Q9UIS9 CROCCP2-202ENST00000412962 2773 ntBASIC17.23■□□□□ 0.35
MBD1Q9UIS9 EPHA10-201ENST00000319637 2050 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
MBD1Q9UIS9 ORAI2-202ENST00000403646 2528 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
MBD1Q9UIS9 PPT2-246ENST00000375137 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
MBD1Q9UIS9 GOLGA7-202ENST00000405786 1903 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
MBD1Q9UIS9 SPNS1-202ENST00000323081 2102 ntTSL 2 BASIC17.23■□□□□ 0.35
MBD1Q9UIS9 ZNF140-207ENST00000440550 1663 ntTSL 2 BASIC17.23■□□□□ 0.35
MBD1Q9UIS9 CRB2-202ENST00000373631 5550 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
MBD1Q9UIS9 OSGIN1-202ENST00000361711 2230 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
MBD1Q9UIS9 ZNF74-201ENST00000357502 2788 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
MBD1Q9UIS9 LGMN-216ENST00000557434 1797 ntTSL 5 BASIC17.23■□□□□ 0.35
MBD1Q9UIS9 SPC24-206ENST00000592540 2315 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
MBD1Q9UIS9 PARVG-206ENST00000444313 3523 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
MBD1Q9UIS9 PCSK7-201ENST00000320934 4649 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
MBD1Q9UIS9 USH1C-205ENST00000527020 2159 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
MBD1Q9UIS9 FUT4-201ENST00000358752 6059 ntAPPRIS P1 BASIC17.22■□□□□ 0.35
MBD1Q9UIS9 RMDN3-202ENST00000338376 2251 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
MBD1Q9UIS9 CPEB2-AS1-201ENST00000500394 1630 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
MBD1Q9UIS9 PAPD5-203ENST00000561678 2916 ntTSL 5 BASIC17.22■□□□□ 0.35
MBD1Q9UIS9 NPRL2-201ENST00000232501 1700 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
MBD1Q9UIS9 GRB10-201ENST00000335866 5032 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
MBD1Q9UIS9 FGFR3-202ENST00000340107 4293 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
MBD1Q9UIS9 CD99P1-204ENST00000435581 2788 ntTSL 2 BASIC17.22■□□□□ 0.35
MBD1Q9UIS9 CYHR1-204ENST00000438911 2020 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
MBD1Q9UIS9 PSMG3-201ENST00000252329 1007 ntAPPRIS P1 TSL 3 BASIC17.22■□□□□ 0.35
MBD1Q9UIS9 SFTPC-201ENST00000318561 997 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
MBD1Q9UIS9 CD99-202ENST00000381180 530 ntTSL 2 BASIC17.22■□□□□ 0.35
MBD1Q9UIS9 SELENOM-201ENST00000400299 694 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
MBD1Q9UIS9 FOLR3-201ENST00000442948 805 ntTSL 5 BASIC17.22■□□□□ 0.35
MBD1Q9UIS9 AL513480.1-201ENST00000451731 511 ntBASIC17.22■□□□□ 0.35
MBD1Q9UIS9 COX20P2-201ENST00000452636 358 ntBASIC17.22■□□□□ 0.35
MBD1Q9UIS9 AL022341.1-201ENST00000455294 389 ntTSL 2 BASIC17.22■□□□□ 0.35
MBD1Q9UIS9 AF131215.3-201ENST00000532453 639 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
MBD1Q9UIS9 RAB3D-202ENST00000589655 924 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
MBD1Q9UIS9 AC239800.4-201ENST00000603712 296 ntBASIC17.22■□□□□ 0.35
MBD1Q9UIS9 BANP-227ENST00000626016 2144 ntTSL 2 BASIC17.22■□□□□ 0.35
MBD1Q9UIS9 PHF20L1-201ENST00000220847 3297 ntTSL 5 BASIC17.22■□□□□ 0.35
MBD1Q9UIS9 CGRRF1-201ENST00000216420 2057 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
MBD1Q9UIS9 GCGR-201ENST00000400723 2051 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
MBD1Q9UIS9 IL12RB2-202ENST00000371000 2454 ntTSL 2 BASIC17.22■□□□□ 0.35
MBD1Q9UIS9 SYBU-201ENST00000276646 2870 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
MBD1Q9UIS9 SKOR1-202ENST00000380035 3675 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
MBD1Q9UIS9 SIRT6-203ENST00000594279 1507 ntTSL 3 BASIC17.21■□□□□ 0.35
MBD1Q9UIS9 HIST1H2BN-204ENST00000612898 1723 ntAPPRIS P1 BASIC17.21■□□□□ 0.35
MBD1Q9UIS9 ATOH1-201ENST00000306011 2212 ntAPPRIS P1 BASIC17.21■□□□□ 0.35
MBD1Q9UIS9 CXXC1-212ENST00000589940 2242 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
MBD1Q9UIS9 SBF2-AS1-201ENST00000498905 2709 ntTSL 5 BASIC17.21■□□□□ 0.35
MBD1Q9UIS9 RAB40C-203ENST00000535977 2717 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
MBD1Q9UIS9 TSPAN17-201ENST00000298564 2810 ntTSL 2 BASIC17.21■□□□□ 0.35
MBD1Q9UIS9 FBXL5-202ENST00000412094 2837 ntAPPRIS ALT1 TSL 1 (best) BASIC17.21■□□□□ 0.35
MBD1Q9UIS9 TXNL4A-201ENST00000269601 3504 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 43.5 ms