Protein–RNA interactions for Protein: Q9P2X8

LINC00474, Putative uncharacterized protein encoded by LINC00474, humanhuman

Predictions only

Length 69 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00474Q9P2X8 HBP1-201ENST00000222574 2829 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
LINC00474Q9P2X8 KLHL22-201ENST00000328879 2616 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
LINC00474Q9P2X8 C18orf8-201ENST00000269221 2162 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
LINC00474Q9P2X8 RCN2-203ENST00000394885 6347 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
LINC00474Q9P2X8 CYP4F11-203ENST00000402119 3161 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
LINC00474Q9P2X8 BAGE2-202ENST00000474011 1482 ntTSL 2 BASIC11.27□□□□□ -0.6
LINC00474Q9P2X8 RUSC1-214ENST00000490373 1700 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
LINC00474Q9P2X8 TMPRSS13-203ENST00000524993 1950 ntAPPRIS P3 TSL 1 (best) BASIC11.27□□□□□ -0.61
LINC00474Q9P2X8 FTCDNL1-204ENST00000622774 1997 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
LINC00474Q9P2X8 ARHGEF16-202ENST00000378373 2211 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
LINC00474Q9P2X8 PMS1-212ENST00000432292 3234 ntTSL 2 BASIC11.27□□□□□ -0.61
LINC00474Q9P2X8 OTUB1-202ENST00000422031 2297 ntAPPRIS ALT1 TSL 5 BASIC11.27□□□□□ -0.61
LINC00474Q9P2X8 NEIL2-202ENST00000403422 2016 ntTSL 2 BASIC11.27□□□□□ -0.61
LINC00474Q9P2X8 PYCR2-208ENST00000612039 1549 ntTSL 3 BASIC11.27□□□□□ -0.61
LINC00474Q9P2X8 PYCR2-209ENST00000612651 1538 ntTSL 5 BASIC11.27□□□□□ -0.61
LINC00474Q9P2X8 PRMT2-201ENST00000291705 1011 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
LINC00474Q9P2X8 OR10H5-201ENST00000308940 1132 ntAPPRIS P1 BASIC11.27□□□□□ -0.61
LINC00474Q9P2X8 TPM1-203ENST00000317516 738 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
LINC00474Q9P2X8 ID2-202ENST00000331129 623 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
LINC00474Q9P2X8 TNFSF13-204ENST00000396542 726 ntTSL 3 BASIC11.27□□□□□ -0.61
LINC00474Q9P2X8 ING5-202ENST00000406941 946 ntAPPRIS ALT1 TSL 1 (best) BASIC11.27□□□□□ -0.61
LINC00474Q9P2X8 SEC61G-203ENST00000415949 732 ntAPPRIS P1 TSL 5 BASIC11.27□□□□□ -0.61
LINC00474Q9P2X8 AL096828.1-201ENST00000423020 542 ntTSL 4 BASIC11.27□□□□□ -0.61
LINC00474Q9P2X8 IGHV3-47-201ENST00000425060 335 ntBASIC11.27□□□□□ -0.61
LINC00474Q9P2X8 B4GALT1-AS1-202ENST00000442432 843 ntTSL 2 BASIC11.27□□□□□ -0.61
LINC00474Q9P2X8 ZNF436-AS1-203ENST00000454117 997 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
LINC00474Q9P2X8 NT5C2-211ENST00000470299 249 ntTSL 5 BASIC11.27□□□□□ -0.61
LINC00474Q9P2X8 AC106771.1-201ENST00000502209 372 ntTSL 2 BASIC11.27□□□□□ -0.61
LINC00474Q9P2X8 PNN-202ENST00000553331 656 ntTSL 3 BASIC11.27□□□□□ -0.61
LINC00474Q9P2X8 TPM1-218ENST00000559281 851 ntTSL 5 BASIC11.27□□□□□ -0.61
LINC00474Q9P2X8 AC026336.2-201ENST00000563922 763 ntTSL 2 BASIC11.27□□□□□ -0.61
LINC00474Q9P2X8 AC007220.1-201ENST00000572466 1055 ntTSL 3 BASIC11.27□□□□□ -0.61
LINC00474Q9P2X8 C1QTNF1-205ENST00000578229 1294 ntTSL 4 BASIC11.27□□□□□ -0.61
LINC00474Q9P2X8 MIR3180-1-201ENST00000580374 94 ntBASIC11.27□□□□□ -0.61
LINC00474Q9P2X8 MIR3180-3-201ENST00000584616 94 ntBASIC11.27□□□□□ -0.61
LINC00474Q9P2X8 ZNF554-204ENST00000591265 1148 ntTSL 5 BASIC11.27□□□□□ -0.61
LINC00474Q9P2X8 AC114488.2-214ENST00000609033 813 ntTSL 5 BASIC11.27□□□□□ -0.61
LINC00474Q9P2X8 FBXL22-204ENST00000638704 729 ntAPPRIS ALT2 TSL 2 BASIC11.27□□□□□ -0.61
LINC00474Q9P2X8 INPP5J-213ENST00000620191 2306 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
LINC00474Q9P2X8 NRSN2-202ENST00000382291 2088 ntAPPRIS P1 TSL 2 BASIC11.27□□□□□ -0.61
LINC00474Q9P2X8 INPP4A-205ENST00000409851 3365 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
LINC00474Q9P2X8 KMT5B-205ENST00000402789 1599 ntTSL 5 BASIC11.27□□□□□ -0.61
LINC00474Q9P2X8 AC006116.8-202ENST00000587620 1550 ntBASIC11.27□□□□□ -0.61
LINC00474Q9P2X8 RTN4-204ENST00000357732 2390 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
LINC00474Q9P2X8 CPXM1-201ENST00000380605 2391 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
LINC00474Q9P2X8 PTPN6-204ENST00000456013 2389 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
LINC00474Q9P2X8 TMEM237-202ENST00000409444 5592 ntAPPRIS ALT2 TSL 5 BASIC11.27□□□□□ -0.61
LINC00474Q9P2X8 CTSA-204ENST00000372484 2149 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
LINC00474Q9P2X8 ADM-208ENST00000534464 1640 ntTSL 2 BASIC11.27□□□□□ -0.61
LINC00474Q9P2X8 FAM237A-203ENST00000543490 1376 ntAPPRIS P1 TSL 5 BASIC11.27□□□□□ -0.61
LINC00474Q9P2X8 KIZ-211ENST00000619574 1971 ntAPPRIS ALT2 TSL 2 BASIC11.27□□□□□ -0.61
LINC00474Q9P2X8 NABP2-201ENST00000267023 1417 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
LINC00474Q9P2X8 C12orf56-207ENST00000543942 3242 ntAPPRIS P1 TSL 5 BASIC11.26□□□□□ -0.61
LINC00474Q9P2X8 H2AFV-201ENST00000222690 3804 ntAPPRIS ALT1 TSL 2 BASIC11.26□□□□□ -0.61
LINC00474Q9P2X8 SELENOF-201ENST00000331835 1781 ntAPPRIS P2 TSL 1 (best) BASIC11.26□□□□□ -0.61
LINC00474Q9P2X8 HOXA-AS3-205ENST00000524304 2063 ntTSL 2 BASIC11.26□□□□□ -0.61
LINC00474Q9P2X8 DTX3-204ENST00000548804 2067 ntAPPRIS P3 TSL 5 BASIC11.26□□□□□ -0.61
LINC00474Q9P2X8 CHST14-201ENST00000306243 3574 ntAPPRIS P1 BASIC11.26□□□□□ -0.61
LINC00474Q9P2X8 RNF32-201ENST00000311822 1842 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
LINC00474Q9P2X8 EIF4G1-204ENST00000352767 5484 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
LINC00474Q9P2X8 LTV1-201ENST00000367576 1847 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
LINC00474Q9P2X8 FGFR2-215ENST00000457416 3061 ntAPPRIS P3 TSL 1 (best) BASIC11.26□□□□□ -0.61
LINC00474Q9P2X8 HAND2-AS1-202ENST00000502896 5278 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
LINC00474Q9P2X8 MX1-210ENST00000455164 2810 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
LINC00474Q9P2X8 GRAMD1B-214ENST00000635736 2814 ntAPPRIS P1 TSL 5 BASIC11.26□□□□□ -0.61
LINC00474Q9P2X8 RGL3-201ENST00000380456 2542 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
LINC00474Q9P2X8 GGN-201ENST00000334928 2239 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
LINC00474Q9P2X8 GGT1-204ENST00000401885 968 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
LINC00474Q9P2X8 AGBL5-AS1-201ENST00000444217 407 ntTSL 5 BASIC11.26□□□□□ -0.61
LINC00474Q9P2X8 PGAP2-206ENST00000459679 795 ntTSL 2 BASIC11.26□□□□□ -0.61
LINC00474Q9P2X8 AC051649.1-201ENST00000509204 330 ntTSL 3 BASIC11.26□□□□□ -0.61
LINC00474Q9P2X8 AC004080.2-201ENST00000523331 556 ntTSL 4 BASIC11.26□□□□□ -0.61
LINC00474Q9P2X8 RAP1B-229ENST00000543393 874 ntTSL 3 BASIC11.26□□□□□ -0.61
LINC00474Q9P2X8 MPI-205ENST00000562606 1052 ntTSL 3 BASIC11.26□□□□□ -0.61
LINC00474Q9P2X8 CHRNB1-207ENST00000575379 1095 ntTSL 2 BASIC11.26□□□□□ -0.61
LINC00474Q9P2X8 PRR29-207ENST00000580752 458 ntTSL 3 BASIC11.26□□□□□ -0.61
LINC00474Q9P2X8 AC005336.2-201ENST00000593183 939 ntBASIC11.26□□□□□ -0.61
LINC00474Q9P2X8 HNF1B-206ENST00000620125 1103 ntTSL 5 BASIC11.26□□□□□ -0.61
LINC00474Q9P2X8 SCAMP4-213ENST00000621748 1172 ntAPPRIS P1 TSL 5 BASIC11.26□□□□□ -0.61
LINC00474Q9P2X8 CCNC-219ENST00000627680 896 ntTSL 5 BASIC11.26□□□□□ -0.61
LINC00474Q9P2X8 SETD3-209ENST00000630307 1281 ntTSL 5 BASIC11.26□□□□□ -0.61
LINC00474Q9P2X8 PTPN11-207ENST00000639857 801 ntTSL 5 BASIC11.26□□□□□ -0.61
LINC00474Q9P2X8 POLR3D-201ENST00000306433 1931 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
LINC00474Q9P2X8 CLK2-202ENST00000361168 1934 ntAPPRIS P3 TSL 1 (best) BASIC11.26□□□□□ -0.61
LINC00474Q9P2X8 PTPN11-201ENST00000351677 6101 ntAPPRIS P3 TSL 1 (best) BASIC11.26□□□□□ -0.61
LINC00474Q9P2X8 PRR29-AS1-202ENST00000580942 2926 ntTSL 2 BASIC11.26□□□□□ -0.61
LINC00474Q9P2X8 WSCD1-210ENST00000574946 5884 ntAPPRIS P1 TSL 2 BASIC11.26□□□□□ -0.61
LINC00474Q9P2X8 LRFN2-201ENST00000338305 3270 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
LINC00474Q9P2X8 ADRA1A-206ENST00000380586 2304 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
LINC00474Q9P2X8 IMPA1-201ENST00000256108 2690 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
LINC00474Q9P2X8 TRMT44-205ENST00000513449 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC11.26□□□□□ -0.61
LINC00474Q9P2X8 DIP2A-204ENST00000457905 3044 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
LINC00474Q9P2X8 PCDHA1-201ENST00000378133 2726 ntBASIC11.26□□□□□ -0.61
LINC00474Q9P2X8 C2CD4A-201ENST00000355522 3445 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
LINC00474Q9P2X8 NLE1-201ENST00000360831 1726 ntTSL 5 BASIC11.26□□□□□ -0.61
LINC00474Q9P2X8 SRPX-202ENST00000432886 1725 ntTSL 2 BASIC11.26□□□□□ -0.61
LINC00474Q9P2X8 ADK-202ENST00000372734 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC11.26□□□□□ -0.61
LINC00474Q9P2X8 HNRNPF-204ENST00000443950 2755 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
LINC00474Q9P2X8 RNF168-201ENST00000318037 5347 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
LINC00474Q9P2X8 NSUN5P2-201ENST00000388955 1789 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Retrieved 100 of 98,524 protein–RNA pairs in 24.9 ms