Protein–RNA interactions for Protein: Q9NYD6

HOXC10, Homeobox protein Hox-C10, humanhuman

Predictions only

Length 342 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC10Q9NYD6 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC19.54■□□□□ 0.72
HOXC10Q9NYD6 UNC5D-204ENST00000420357 2966 ntTSL 5 BASIC19.54■□□□□ 0.72
HOXC10Q9NYD6 PSRC1-201ENST00000369903 1710 ntAPPRIS P3 TSL 5 BASIC19.54■□□□□ 0.72
HOXC10Q9NYD6 RAB43-201ENST00000315150 4467 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
HOXC10Q9NYD6 SCNN1D-201ENST00000325425 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
HOXC10Q9NYD6 MAP4K4-204ENST00000350198 7316 ntTSL 5 BASIC19.54■□□□□ 0.72
HOXC10Q9NYD6 OGG1-206ENST00000349503 1950 ntTSL 5 BASIC19.54■□□□□ 0.72
HOXC10Q9NYD6 WT1-205ENST00000452863 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
HOXC10Q9NYD6 YAE1D1-202ENST00000432096 968 ntTSL 2 BASIC19.54■□□□□ 0.72
HOXC10Q9NYD6 AC069262.1-201ENST00000539058 672 ntBASIC19.54■□□□□ 0.72
HOXC10Q9NYD6 OTUB2-202ENST00000553723 708 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
HOXC10Q9NYD6 GNAO1-210ENST00000569295 930 ntTSL 2 BASIC19.54■□□□□ 0.72
HOXC10Q9NYD6 MSL1-202ENST00000398532 4707 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
HOXC10Q9NYD6 CLDN7-203ENST00000538261 1923 ntTSL 5 BASIC19.54■□□□□ 0.72
HOXC10Q9NYD6 MBD1-206ENST00000382948 2434 ntAPPRIS P3 TSL 2 BASIC19.54■□□□□ 0.72
HOXC10Q9NYD6 TSSK3-201ENST00000373534 1368 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
HOXC10Q9NYD6 CGREF1-205ENST00000404694 1376 ntAPPRIS ALT2 TSL 2 BASIC19.54■□□□□ 0.72
HOXC10Q9NYD6 TOP3BP1-201ENST00000420768 1380 ntBASIC19.54■□□□□ 0.72
HOXC10Q9NYD6 IMP3-201ENST00000314852 2028 ntAPPRIS P1 TSL 2 BASIC19.54■□□□□ 0.72
HOXC10Q9NYD6 SLC44A3-207ENST00000529450 2045 ntTSL 2 BASIC19.54■□□□□ 0.72
HOXC10Q9NYD6 ZBTB16-201ENST00000335953 2523 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
HOXC10Q9NYD6 ZNF274-203ENST00000424679 2539 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
HOXC10Q9NYD6 TINF2-201ENST00000267415 1852 ntAPPRIS P4 TSL 1 (best) BASIC19.54■□□□□ 0.72
HOXC10Q9NYD6 GPT-202ENST00000394955 1885 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
HOXC10Q9NYD6 LINC01097-201ENST00000627163 2122 ntTSL 2 BASIC19.54■□□□□ 0.72
HOXC10Q9NYD6 CDC42EP3-201ENST00000295324 5700 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
HOXC10Q9NYD6 RNF146-201ENST00000309649 2624 ntAPPRIS P3 TSL 4 BASIC19.54■□□□□ 0.72
HOXC10Q9NYD6 STK11-201ENST00000326873 2611 ntAPPRIS P2 TSL 1 (best) BASIC19.54■□□□□ 0.72
HOXC10Q9NYD6 BAG5-202ENST00000337322 1960 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
HOXC10Q9NYD6 OGG1-203ENST00000302036 2220 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
HOXC10Q9NYD6 IGLL5-203ENST00000532223 1335 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
HOXC10Q9NYD6 BSG-215ENST00000618006 1329 ntTSL 2 BASIC19.53■□□□□ 0.72
HOXC10Q9NYD6 EGFEM1P-202ENST00000431685 1563 ntBASIC19.53■□□□□ 0.72
HOXC10Q9NYD6 SEMA7A-203ENST00000543145 2304 ntTSL 2 BASIC19.53■□□□□ 0.72
HOXC10Q9NYD6 FKRP-202ENST00000391909 2801 ntAPPRIS P1 TSL 2 BASIC19.53■□□□□ 0.72
HOXC10Q9NYD6 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC19.53■□□□□ 0.72
HOXC10Q9NYD6 UVSSA-207ENST00000511216 2927 ntAPPRIS P2 TSL 1 (best) BASIC19.53■□□□□ 0.72
HOXC10Q9NYD6 CHRM2-201ENST00000320658 1694 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
HOXC10Q9NYD6 TNFAIP1-202ENST00000544907 1656 ntTSL 2 BASIC19.53■□□□□ 0.72
HOXC10Q9NYD6 ZNF696-201ENST00000330143 2795 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
HOXC10Q9NYD6 ELOC-209ENST00000602840 2780 ntTSL 5 BASIC19.53■□□□□ 0.72
HOXC10Q9NYD6 POC1A-203ENST00000474012 1760 ntAPPRIS ALT2 TSL 2 BASIC19.53■□□□□ 0.72
HOXC10Q9NYD6 ATRN-201ENST00000262919 8633 ntAPPRIS P4 TSL 5 BASIC19.53■□□□□ 0.72
HOXC10Q9NYD6 CDIPT-209ENST00000569956 1532 ntAPPRIS P1 TSL 5 BASIC19.53■□□□□ 0.72
HOXC10Q9NYD6 CCDC107-201ENST00000327351 804 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
HOXC10Q9NYD6 LINC00313-201ENST00000332440 579 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
HOXC10Q9NYD6 S100A14-204ENST00000368702 1218 ntAPPRIS P1 TSL 3 BASIC19.53■□□□□ 0.72
HOXC10Q9NYD6 CFLAR-208ENST00000423241 2128 ntAPPRIS P3 TSL 1 (best) BASIC19.53■□□□□ 0.72
HOXC10Q9NYD6 AC004865.2-202ENST00000444348 852 ntTSL 3 BASIC19.53■□□□□ 0.72
HOXC10Q9NYD6 S100A14-206ENST00000476873 1025 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
HOXC10Q9NYD6 HILS1-201ENST00000504307 1219 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
HOXC10Q9NYD6 LINC01336-202ENST00000506086 479 ntTSL 5 BASIC19.53■□□□□ 0.72
HOXC10Q9NYD6 VASH2-211ENST00000517399 1068 ntAPPRIS ALT1 TSL 1 (best) BASIC19.53■□□□□ 0.72
HOXC10Q9NYD6 KRTAP5-9-201ENST00000528743 1136 ntAPPRIS P1 BASIC19.53■□□□□ 0.72
HOXC10Q9NYD6 AC091053.1-201ENST00000529883 744 ntTSL 3 BASIC19.53■□□□□ 0.72
HOXC10Q9NYD6 DUX4L27-201ENST00000554796 1261 ntBASIC19.53■□□□□ 0.72
HOXC10Q9NYD6 LMO7-AS1-202ENST00000568735 467 ntTSL 3 BASIC19.53■□□□□ 0.72
HOXC10Q9NYD6 WT1-AS_2.1-201ENST00000613208 137 ntBASIC19.53■□□□□ 0.72
HOXC10Q9NYD6 GOLGA2-215ENST00000639983 1038 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
HOXC10Q9NYD6 AC084121.4-201ENST00000641598 221 ntBASIC19.53■□□□□ 0.72
HOXC10Q9NYD6 AF228730.8-201ENST00000642140 221 ntBASIC19.53■□□□□ 0.72
HOXC10Q9NYD6 FAM219B-204ENST00000563119 2721 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
HOXC10Q9NYD6 EVPL-202ENST00000586740 6223 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
HOXC10Q9NYD6 TMEM143-202ENST00000377431 1960 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
HOXC10Q9NYD6 SNX1-213ENST00000561026 1374 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
HOXC10Q9NYD6 PCGF2-206ENST00000618941 1499 ntTSL 5 BASIC19.53■□□□□ 0.72
HOXC10Q9NYD6 CD276-201ENST00000318424 2738 ntTSL 5 BASIC19.53■□□□□ 0.72
HOXC10Q9NYD6 EGFL6-202ENST00000380602 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
HOXC10Q9NYD6 GAS2L1-210ENST00000621062 2483 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
HOXC10Q9NYD6 GAL3ST1-201ENST00000338911 1782 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
HOXC10Q9NYD6 NEIL1-221ENST00000569035 1797 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
HOXC10Q9NYD6 SYNM-202ENST00000336292 7394 ntAPPRIS P4 TSL 1 (best) BASIC19.52■□□□□ 0.72
HOXC10Q9NYD6 MXRA8-202ENST00000342753 2231 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
HOXC10Q9NYD6 ADARB1-201ENST00000348831 6882 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
HOXC10Q9NYD6 ANXA8-203ENST00000583874 1860 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
HOXC10Q9NYD6 PLCG1-201ENST00000244007 5285 ntAPPRIS P4 TSL 5 BASIC19.52■□□□□ 0.72
HOXC10Q9NYD6 LINC00671-201ENST00000301683 1958 ntTSL 2 BASIC19.52■□□□□ 0.72
HOXC10Q9NYD6 MOAP1-201ENST00000298894 2441 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
HOXC10Q9NYD6 WWTR1-204ENST00000467467 1603 ntAPPRIS P1 TSL 5 BASIC19.52■□□□□ 0.72
HOXC10Q9NYD6 HECTD2-203ENST00000371681 2175 ntTSL 2 BASIC19.52■□□□□ 0.72
HOXC10Q9NYD6 TSNARE1-205ENST00000520166 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
HOXC10Q9NYD6 MRPL2-201ENST00000230413 899 ntTSL 2 BASIC19.52■□□□□ 0.72
HOXC10Q9NYD6 MECP2-203ENST00000407218 1174 ntTSL 5 BASIC19.52■□□□□ 0.72
HOXC10Q9NYD6 RBPMS2P1-201ENST00000437762 623 ntBASIC19.52■□□□□ 0.72
HOXC10Q9NYD6 AC108047.1-201ENST00000457407 404 ntTSL 2 BASIC19.52■□□□□ 0.72
HOXC10Q9NYD6 AL391335.1-201ENST00000504583 535 ntTSL 4 BASIC19.52■□□□□ 0.72
HOXC10Q9NYD6 MTRF1LP2-201ENST00000506027 1122 ntBASIC19.52■□□□□ 0.72
HOXC10Q9NYD6 FGFR1OP2-206ENST00000546072 956 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
HOXC10Q9NYD6 KRT16P2-202ENST00000579062 563 ntTSL 4 BASIC19.52■□□□□ 0.72
HOXC10Q9NYD6 AC091167.2-201ENST00000579581 588 ntBASIC19.52■□□□□ 0.72
HOXC10Q9NYD6 AC244153.1-203ENST00000622796 419 ntTSL 2 BASIC19.52■□□□□ 0.72
HOXC10Q9NYD6 FOXI3-201ENST00000428390 2804 ntAPPRIS P1 TSL 3 BASIC19.52■□□□□ 0.72
HOXC10Q9NYD6 RNF146-203ENST00000368314 2369 ntAPPRIS ALT1 TSL 2 BASIC19.52■□□□□ 0.72
HOXC10Q9NYD6 ADAMTS16-203ENST00000511368 2682 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
HOXC10Q9NYD6 LARGE2-208ENST00000531526 2528 ntAPPRIS P3 TSL 2 BASIC19.52■□□□□ 0.71
HOXC10Q9NYD6 TUBB3P1-201ENST00000405796 1332 ntBASIC19.51■□□□□ 0.71
HOXC10Q9NYD6 CORO1A-208ENST00000565497 1348 ntTSL 5 BASIC19.51■□□□□ 0.71
HOXC10Q9NYD6 FNBP1-203ENST00000443566 5227 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
HOXC10Q9NYD6 HYAL3-205ENST00000450982 1402 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
HOXC10Q9NYD6 AL139398.1-201ENST00000638795 1529 ntTSL 5 BASIC19.51■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 44.8 ms