Protein–RNA interactions for Protein: Q9NWS1

PARPBP, PCNA-interacting partner, humanhuman

Predictions only

Length 579 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PARPBPQ9NWS1 RAB17-203ENST00000409576 466 ntTSL 3 BASIC15.42■□□□□ 0.06
PARPBPQ9NWS1 BX005266.1-201ENST00000473402 457 ntBASIC15.42■□□□□ 0.06
PARPBPQ9NWS1 IDH3B-206ENST00000474315 1279 ntAPPRIS ALT1 TSL 1 (best) BASIC15.42■□□□□ 0.06
PARPBPQ9NWS1 CNOT8-225ENST00000524105 904 ntTSL 2 BASIC15.42■□□□□ 0.06
PARPBPQ9NWS1 AP001107.6-201ENST00000526655 516 ntTSL 3 BASIC15.42■□□□□ 0.06
PARPBPQ9NWS1 MTHFSD-203ENST00000543303 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
PARPBPQ9NWS1 SART3-203ENST00000546611 1184 ntBASIC15.42■□□□□ 0.06
PARPBPQ9NWS1 CARHSP1-205ENST00000562843 843 ntTSL 2 BASIC15.42■□□□□ 0.06
PARPBPQ9NWS1 LINC00454-206ENST00000609861 841 ntTSL 5 BASIC15.42■□□□□ 0.06
PARPBPQ9NWS1 AL589182.2-201ENST00000619332 1049 ntBASIC15.42■□□□□ 0.06
PARPBPQ9NWS1 AL031008.1-201ENST00000619963 541 ntBASIC15.42■□□□□ 0.06
PARPBPQ9NWS1 TST-204ENST00000622841 1105 ntAPPRIS P1 TSL 5 BASIC15.42■□□□□ 0.06
PARPBPQ9NWS1 MTHFSD-220ENST00000634347 1207 ntAPPRIS P3 TSL 1 (best) BASIC15.42■□□□□ 0.06
PARPBPQ9NWS1 TCEA1-208ENST00000521604 2858 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
PARPBPQ9NWS1 RGS6-210ENST00000553530 5685 ntAPPRIS P3 TSL 1 (best) BASIC15.42■□□□□ 0.06
PARPBPQ9NWS1 ZNF211-203ENST00000299871 2577 ntAPPRIS ALT2 TSL 3 BASIC15.42■□□□□ 0.06
PARPBPQ9NWS1 AC124067.4-201ENST00000519691 2379 ntBASIC15.42■□□□□ 0.06
PARPBPQ9NWS1 ZNF296-202ENST00000622376 1631 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
PARPBPQ9NWS1 KIAA0368-201ENST00000259335 7391 ntAPPRIS P2 TSL 1 (best) BASIC15.42■□□□□ 0.06
PARPBPQ9NWS1 ARNTL-205ENST00000403510 2745 ntTSL 2 BASIC15.42■□□□□ 0.06
PARPBPQ9NWS1 RALGDS-205ENST00000393160 3801 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
PARPBPQ9NWS1 FLOT2-202ENST00000394908 2618 ntAPPRIS P3 TSL 1 (best) BASIC15.42■□□□□ 0.06
PARPBPQ9NWS1 SEMA5B-211ENST00000616742 4933 ntAPPRIS P3 TSL 5 BASIC15.42■□□□□ 0.06
PARPBPQ9NWS1 FAM129C-202ENST00000335393 2508 ntAPPRIS P3 TSL 1 (best) BASIC15.42■□□□□ 0.06
PARPBPQ9NWS1 TMEM216-201ENST00000334888 1306 ntAPPRIS ALT2 TSL 2 BASIC15.42■□□□□ 0.06
PARPBPQ9NWS1 CACNG5-202ENST00000533854 1311 ntAPPRIS P1 TSL 2 BASIC15.42■□□□□ 0.06
PARPBPQ9NWS1 INPP4A-202ENST00000409016 9996 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
PARPBPQ9NWS1 CYP2D6-203ENST00000360608 1684 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
PARPBPQ9NWS1 TRIM60-203ENST00000508504 1674 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
PARPBPQ9NWS1 FFAR2-202ENST00000599180 2133 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
PARPBPQ9NWS1 FEM1C-201ENST00000274457 5816 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
PARPBPQ9NWS1 GIGYF1-201ENST00000275732 6530 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
PARPBPQ9NWS1 AC138969.1-205ENST00000381497 1552 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
PARPBPQ9NWS1 ABCB8-211ENST00000477092 1596 ntTSL 5 BASIC15.41■□□□□ 0.06
PARPBPQ9NWS1 FAM129B-201ENST00000373312 3957 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
PARPBPQ9NWS1 NEXN-AS1-201ENST00000421331 2292 ntTSL 2 BASIC15.41■□□□□ 0.06
PARPBPQ9NWS1 NFS1-202ENST00000374085 2645 ntTSL 2 BASIC15.41■□□□□ 0.06
PARPBPQ9NWS1 SYT15-201ENST00000374321 1369 ntAPPRIS P4 TSL 2 BASIC15.41■□□□□ 0.06
PARPBPQ9NWS1 TRIM17-204ENST00000366698 1748 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
PARPBPQ9NWS1 EPM2A-201ENST00000367519 3465 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
PARPBPQ9NWS1 EXOSC3-202ENST00000396521 768 ntTSL 2 BASIC15.41■□□□□ 0.06
PARPBPQ9NWS1 KRT18P67-201ENST00000432816 1264 ntBASIC15.41■□□□□ 0.06
PARPBPQ9NWS1 RAB42-202ENST00000465518 857 ntAPPRIS P1 TSL 2 BASIC15.41■□□□□ 0.06
PARPBPQ9NWS1 TXNRD2-212ENST00000485358 850 ntTSL 2 BASIC15.41■□□□□ 0.06
PARPBPQ9NWS1 RNPS1P1-201ENST00000507437 918 ntBASIC15.41■□□□□ 0.06
PARPBPQ9NWS1 AC097372.2-201ENST00000510996 732 ntTSL 3 BASIC15.41■□□□□ 0.06
PARPBPQ9NWS1 MTUS2-205ENST00000542829 1165 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
PARPBPQ9NWS1 RNPS1-222ENST00000567147 830 ntTSL 3 BASIC15.41■□□□□ 0.06
PARPBPQ9NWS1 AC139887.3-201ENST00000568585 713 ntBASIC15.41■□□□□ 0.06
PARPBPQ9NWS1 AC068594.1-202ENST00000581657 749 ntTSL 3 BASIC15.41■□□□□ 0.06
PARPBPQ9NWS1 SYBU-224ENST00000529690 1983 ntAPPRIS ALT2 TSL 2 BASIC15.41■□□□□ 0.06
PARPBPQ9NWS1 SNAP23-201ENST00000249647 2687 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
PARPBPQ9NWS1 SFT2D3-201ENST00000310981 3735 ntAPPRIS P1 BASIC15.41■□□□□ 0.06
PARPBPQ9NWS1 HAPLN3-204ENST00000562889 1547 ntTSL 5 BASIC15.41■□□□□ 0.06
PARPBPQ9NWS1 ALK-201ENST00000389048 6220 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
PARPBPQ9NWS1 MMEL1-201ENST00000378412 2849 ntAPPRIS P1 TSL 2 BASIC15.41■□□□□ 0.06
PARPBPQ9NWS1 ZBTB47-202ENST00000505904 2456 ntTSL 5 BASIC15.41■□□□□ 0.06
PARPBPQ9NWS1 TMEM145-201ENST00000301204 1768 ntAPPRIS P2 TSL 2 BASIC15.41■□□□□ 0.06
PARPBPQ9NWS1 NCF1C-201ENST00000438382 1427 ntBASIC15.41■□□□□ 0.06
PARPBPQ9NWS1 RAI2-203ENST00000415486 2037 ntTSL 2 BASIC15.41■□□□□ 0.06
PARPBPQ9NWS1 SYNGR2-206ENST00000589711 2041 ntTSL 5 BASIC15.41■□□□□ 0.06
PARPBPQ9NWS1 UQCC3-202ENST00000531323 2288 ntAPPRIS P1 TSL 3 BASIC15.41■□□□□ 0.06
PARPBPQ9NWS1 PVR-204ENST00000406449 1344 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
PARPBPQ9NWS1 MFSD14A-201ENST00000370152 2777 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
PARPBPQ9NWS1 TMEM184A-201ENST00000297477 6276 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
PARPBPQ9NWS1 YIPF2-204ENST00000586748 1550 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
PARPBPQ9NWS1 CHAC1-204ENST00000617768 1560 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
PARPBPQ9NWS1 PCCB-209ENST00000469217 1841 ntAPPRIS ALT2 TSL 2 BASIC15.4■□□□□ 0.06
PARPBPQ9NWS1 SUSD4-208ENST00000494793 1833 ntTSL 5 BASIC15.4■□□□□ 0.06
PARPBPQ9NWS1 PPM1D-201ENST00000305921 4778 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
PARPBPQ9NWS1 ANXA8-202ENST00000583448 1971 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
PARPBPQ9NWS1 JMY-201ENST00000396137 9042 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
PARPBPQ9NWS1 KIF26A-201ENST00000315264 6714 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
PARPBPQ9NWS1 PDCD7-201ENST00000204549 2851 ntAPPRIS P2 TSL 1 (best) BASIC15.4■□□□□ 0.06
PARPBPQ9NWS1 GID4-202ENST00000376345 1391 ntTSL 3 BASIC15.4■□□□□ 0.06
PARPBPQ9NWS1 MLLT10-203ENST00000377072 5126 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
PARPBPQ9NWS1 MICA-209ENST00000449934 1386 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
PARPBPQ9NWS1 BCL2L11-201ENST00000308659 1522 ntAPPRIS ALT2 TSL 2 BASIC15.4■□□□□ 0.06
PARPBPQ9NWS1 TOR3A-201ENST00000352445 1182 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
PARPBPQ9NWS1 DNAH14-205ENST00000366850 1103 ntTSL 5 BASIC15.4■□□□□ 0.06
PARPBPQ9NWS1 MED22-202ENST00000371999 987 ntTSL 3 BASIC15.4■□□□□ 0.06
PARPBPQ9NWS1 COLEC11-207ENST00000404205 1062 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
PARPBPQ9NWS1 POM121L12-201ENST00000408890 1283 ntAPPRIS P1 BASIC15.4■□□□□ 0.06
PARPBPQ9NWS1 VPS13A-AS1-201ENST00000415172 519 ntTSL 2 BASIC15.4■□□□□ 0.06
PARPBPQ9NWS1 ACTG1P4-201ENST00000425123 1122 ntBASIC15.4■□□□□ 0.06
PARPBPQ9NWS1 AC079781.3-201ENST00000449110 356 ntBASIC15.4■□□□□ 0.06
PARPBPQ9NWS1 LAT-205ENST00000454369 1262 ntAPPRIS ALT2 TSL 5 BASIC15.4■□□□□ 0.06
PARPBPQ9NWS1 NCAM1-AS1-202ENST00000533638 618 ntTSL 4 BASIC15.4■□□□□ 0.06
PARPBPQ9NWS1 AC021087.4-201ENST00000563761 564 ntBASIC15.4■□□□□ 0.06
PARPBPQ9NWS1 SPINT1-AS1-203ENST00000565315 629 ntTSL 2 BASIC15.4■□□□□ 0.06
PARPBPQ9NWS1 AC020909.1-201ENST00000599632 1265 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
PARPBPQ9NWS1 AC104692.2-201ENST00000603054 253 ntBASIC15.4■□□□□ 0.06
PARPBPQ9NWS1 PTENP1-AS-201ENST00000627688 873 ntTSL 5 BASIC15.4■□□□□ 0.06
PARPBPQ9NWS1 AL161669.4-201ENST00000634353 732 ntAPPRIS P1 TSL 2 BASIC15.4■□□□□ 0.06
PARPBPQ9NWS1 PPP1R16B-201ENST00000299824 6251 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
PARPBPQ9NWS1 CBFB-202ENST00000412916 2971 ntAPPRIS ALT1 TSL 1 (best) BASIC15.4■□□□□ 0.06
PARPBPQ9NWS1 RTKN2-203ENST00000395260 2076 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
PARPBPQ9NWS1 CLDN9-201ENST00000445369 2050 ntAPPRIS P1 BASIC15.4■□□□□ 0.06
PARPBPQ9NWS1 LRPPRC-203ENST00000409946 1848 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
PARPBPQ9NWS1 ACIN1-205ENST00000457657 4815 ntAPPRIS ALT2 TSL 5 BASIC15.4■□□□□ 0.06
Retrieved 100 of 98,524 protein–RNA pairs in 33.1 ms