Protein–RNA interactions for Protein: Q9NR96

TLR9, Toll-like receptor 9, humanhuman

Predictions only

Length 1,032 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TLR9Q9NR96 NBPF9-209ENST00000621645 5632 ntAPPRIS ALT2 TSL 2 BASIC18.14■□□□□ 0.49
TLR9Q9NR96 SPEM1-201ENST00000323675 982 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
TLR9Q9NR96 EIF5A-201ENST00000336452 1256 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
TLR9Q9NR96 AC015922.1-201ENST00000421102 1152 ntBASIC18.14■□□□□ 0.49
TLR9Q9NR96 AC107890.1-201ENST00000422478 521 ntBASIC18.14■□□□□ 0.49
TLR9Q9NR96 GPS2P2-201ENST00000430745 888 ntBASIC18.14■□□□□ 0.49
TLR9Q9NR96 RBPMS2P1-201ENST00000437762 623 ntBASIC18.14■□□□□ 0.49
TLR9Q9NR96 AC125807.1-201ENST00000483097 614 ntBASIC18.14■□□□□ 0.49
TLR9Q9NR96 AC019103.1-201ENST00000503095 272 ntTSL 3 BASIC18.14■□□□□ 0.49
TLR9Q9NR96 CERNA1-201ENST00000559779 908 ntTSL 3 BASIC18.14■□□□□ 0.49
TLR9Q9NR96 ZNF667-AS1-204ENST00000588158 921 ntTSL 3 BASIC18.14■□□□□ 0.49
TLR9Q9NR96 FOSB-211ENST00000592436 1057 ntTSL 5 BASIC18.14■□□□□ 0.49
TLR9Q9NR96 CBR3-AS1-216ENST00000624883 564 ntTSL 3 BASIC18.14■□□□□ 0.49
TLR9Q9NR96 ZDHHC19-201ENST00000296326 1306 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
TLR9Q9NR96 FDXR-203ENST00000420580 1705 ntTSL 2 BASIC18.14■□□□□ 0.49
TLR9Q9NR96 DCST1-204ENST00000423025 2199 ntAPPRIS ALT2 TSL 2 BASIC18.14■□□□□ 0.49
TLR9Q9NR96 NAA35-201ENST00000361671 2649 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
TLR9Q9NR96 RAB39A-201ENST00000320578 1830 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
TLR9Q9NR96 PDHX-203ENST00000448838 2653 ntTSL 5 BASIC18.14■□□□□ 0.49
TLR9Q9NR96 BPTF-201ENST00000306378 9688 ntAPPRIS P2 TSL 1 (best) BASIC18.14■□□□□ 0.49
TLR9Q9NR96 TSKS-201ENST00000246801 1883 ntAPPRIS P2 TSL 1 (best) BASIC18.14■□□□□ 0.49
TLR9Q9NR96 AC018470.1-201ENST00000624790 3129 ntBASIC18.14■□□□□ 0.49
TLR9Q9NR96 GAREM2-201ENST00000401533 4161 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
TLR9Q9NR96 TEX264-202ENST00000395057 1555 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
TLR9Q9NR96 NOV-201ENST00000259526 2522 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
TLR9Q9NR96 THNSL2-202ENST00000343544 2052 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
TLR9Q9NR96 DOK7-201ENST00000340083 2562 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
TLR9Q9NR96 DOK7-203ENST00000507039 2551 ntTSL 2 BASIC18.13■□□□□ 0.49
TLR9Q9NR96 PDE6B-202ENST00000429163 2120 ntTSL 2 BASIC18.13■□□□□ 0.49
TLR9Q9NR96 PNMA6E-201ENST00000445091 2192 ntAPPRIS P1 TSL 2 BASIC18.13■□□□□ 0.49
TLR9Q9NR96 SAMD11-214ENST00000618323 2159 ntTSL 5 BASIC18.13■□□□□ 0.49
TLR9Q9NR96 AC020763.4-201ENST00000623414 4170 ntBASIC18.13■□□□□ 0.49
TLR9Q9NR96 VMA21-202ENST00000370361 693 ntTSL 5 BASIC18.13■□□□□ 0.49
TLR9Q9NR96 XAGE1A-203ENST00000375602 614 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
TLR9Q9NR96 XAGE1B-203ENST00000375616 614 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
TLR9Q9NR96 AC236430.1-201ENST00000402231 743 ntBASIC18.13■□□□□ 0.49
TLR9Q9NR96 CENPM-205ENST00000404067 905 ntTSL 3 BASIC18.13■□□□□ 0.49
TLR9Q9NR96 SPCS2P4-201ENST00000436160 681 ntBASIC18.13■□□□□ 0.49
TLR9Q9NR96 AC007274.1-201ENST00000439805 662 ntBASIC18.13■□□□□ 0.49
TLR9Q9NR96 AC139713.2-206ENST00000499587 566 ntTSL 4 BASIC18.13■□□□□ 0.49
TLR9Q9NR96 TERF1P3-201ENST00000505638 1227 ntBASIC18.13■□□□□ 0.49
TLR9Q9NR96 IGHV3-62-201ENST00000520057 340 ntBASIC18.13■□□□□ 0.49
TLR9Q9NR96 AC055854.1-201ENST00000523627 570 ntTSL 4 BASIC18.13■□□□□ 0.49
TLR9Q9NR96 POLD4-211ENST00000539074 714 ntTSL 3 BASIC18.13■□□□□ 0.49
TLR9Q9NR96 AC087641.1-201ENST00000557561 1021 ntBASIC18.13■□□□□ 0.49
TLR9Q9NR96 AC104985.1-201ENST00000587528 507 ntTSL 3 BASIC18.13■□□□□ 0.49
TLR9Q9NR96 AC141424.1-203ENST00000599026 887 ntTSL 5 BASIC18.13■□□□□ 0.49
TLR9Q9NR96 AC243571.2-201ENST00000615265 628 ntTSL 3 BASIC18.13■□□□□ 0.49
TLR9Q9NR96 OPN5-206ENST00000638973 1090 ntTSL 5 BASIC18.13■□□□□ 0.49
TLR9Q9NR96 DUOXA1-202ENST00000430224 1317 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
TLR9Q9NR96 CLK1-205ENST00000434813 2026 ntTSL 2 BASIC18.13■□□□□ 0.49
TLR9Q9NR96 MAN1A1-201ENST00000368468 5014 ntAPPRIS P1 TSL 2 BASIC18.13■□□□□ 0.49
TLR9Q9NR96 PHF20L1-209ENST00000395386 6237 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
TLR9Q9NR96 ZNF395-211ENST00000523202 2068 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
TLR9Q9NR96 FAM213B-202ENST00000378425 2665 ntAPPRIS ALT2 TSL 2 BASIC18.13■□□□□ 0.49
TLR9Q9NR96 ACTN4-202ENST00000390009 2102 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
TLR9Q9NR96 ZNF446-203ENST00000594369 2238 ntAPPRIS P2 TSL 1 (best) BASIC18.13■□□□□ 0.49
TLR9Q9NR96 ENOSF1-202ENST00000340116 1658 ntTSL 5 BASIC18.12■□□□□ 0.49
TLR9Q9NR96 CBS-203ENST00000398158 2453 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
TLR9Q9NR96 CBSL-206ENST00000624406 2453 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
TLR9Q9NR96 MFGE8-202ENST00000268151 1752 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
TLR9Q9NR96 PGRMC1-202ENST00000535419 1762 ntTSL 2 BASIC18.12■□□□□ 0.49
TLR9Q9NR96 ANKIB1-201ENST00000265742 6081 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
TLR9Q9NR96 IFFO1-204ENST00000396840 2677 ntAPPRIS ALT1 TSL 5 BASIC18.12■□□□□ 0.49
TLR9Q9NR96 AC022916.1-201ENST00000590478 2658 ntTSL 2 BASIC18.12■□□□□ 0.49
TLR9Q9NR96 CCDC92-201ENST00000238156 2787 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
TLR9Q9NR96 ZIC1-201ENST00000282928 5241 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
TLR9Q9NR96 CNTNAP3B-203ENST00000377561 5379 ntAPPRIS P2 TSL 1 (best) BASIC18.12■□□□□ 0.49
TLR9Q9NR96 LST1-202ENST00000303757 604 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
TLR9Q9NR96 COPE-202ENST00000349893 948 ntTSL 2 BASIC18.12■□□□□ 0.49
TLR9Q9NR96 CEP19-201ENST00000399942 1172 ntAPPRIS ALT2 TSL 5 BASIC18.12■□□□□ 0.49
TLR9Q9NR96 ZDHHC20-IT1-201ENST00000417513 440 ntTSL 3 BASIC18.12■□□□□ 0.49
TLR9Q9NR96 HNRNPA1P40-201ENST00000426371 1278 ntBASIC18.12■□□□□ 0.49
TLR9Q9NR96 Z97056.1-201ENST00000433230 556 ntTSL 2 BASIC18.12■□□□□ 0.49
TLR9Q9NR96 AC002472.2-201ENST00000442739 958 ntBASIC18.12■□□□□ 0.49
TLR9Q9NR96 KRBOX1-AS1-201ENST00000447834 2134 ntTSL 2 BASIC18.12■□□□□ 0.49
TLR9Q9NR96 AC107464.1-203ENST00000468356 2120 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
TLR9Q9NR96 OARD1-208ENST00000469104 704 ntTSL 2 BASIC18.12■□□□□ 0.49
TLR9Q9NR96 IQSEC2-204ENST00000485377 835 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
TLR9Q9NR96 LINC02242-201ENST00000507298 641 ntTSL 5 BASIC18.12■□□□□ 0.49
TLR9Q9NR96 SFTPC-204ENST00000520605 519 ntTSL 3 BASIC18.12■□□□□ 0.49
TLR9Q9NR96 BATF2-204ENST00000527716 1230 ntTSL 2 BASIC18.12■□□□□ 0.49
TLR9Q9NR96 RNF24-204ENST00000545616 1128 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
TLR9Q9NR96 AC009053.3-201ENST00000567148 574 ntTSL 4 BASIC18.12■□□□□ 0.49
TLR9Q9NR96 INO80E-210ENST00000567705 880 ntTSL 3 BASIC18.12■□□□□ 0.49
TLR9Q9NR96 GNAO1-210ENST00000569295 930 ntTSL 2 BASIC18.12■□□□□ 0.49
TLR9Q9NR96 GMFG-207ENST00000598034 1028 ntAPPRIS ALT1 TSL 1 (best) BASIC18.12■□□□□ 0.49
TLR9Q9NR96 OARD1-216ENST00000628419 1188 ntTSL 5 BASIC18.12■□□□□ 0.49
TLR9Q9NR96 JMJD6-205ENST00000585429 1330 ntTSL 5 BASIC18.12■□□□□ 0.49
TLR9Q9NR96 PLK3-201ENST00000372201 2492 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
TLR9Q9NR96 CHST2-201ENST00000309575 4582 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
TLR9Q9NR96 PLTP-202ENST00000372420 1530 ntTSL 2 BASIC18.12■□□□□ 0.49
TLR9Q9NR96 MFSD2B-202ENST00000406420 1528 ntAPPRIS P2 TSL 5 BASIC18.12■□□□□ 0.49
TLR9Q9NR96 COQ6-220ENST00000629426 1538 ntTSL 5 BASIC18.12■□□□□ 0.49
TLR9Q9NR96 AL139398.1-201ENST00000638795 1529 ntTSL 5 BASIC18.12■□□□□ 0.49
TLR9Q9NR96 NFKBIA-201ENST00000216797 1558 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
TLR9Q9NR96 PJA1-202ENST00000374571 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
TLR9Q9NR96 ZNF696-201ENST00000330143 2795 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
TLR9Q9NR96 TMEM59L-205ENST00000600490 1717 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
TLR9Q9NR96 KRCC1-201ENST00000347055 1753 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 104.9 ms