Protein–RNA interactions for Protein: Q9H6J7

C11orf49, UPF0705 protein C11orf49, humanhuman

Predictions only

Length 331 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf49Q9H6J7 JMJD6-205ENST00000585429 1330 ntTSL 5 BASIC18.65■□□□□ 0.58
C11orf49Q9H6J7 DPY19L3-206ENST00000587077 2456 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
C11orf49Q9H6J7 AL391825.1-201ENST00000457671 1364 ntBASIC18.65■□□□□ 0.58
C11orf49Q9H6J7 TDH-201ENST00000525246 1357 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
C11orf49Q9H6J7 CETN4P-206ENST00000642099 2168 ntBASIC18.65■□□□□ 0.58
C11orf49Q9H6J7 PCSK7-201ENST00000320934 4649 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
C11orf49Q9H6J7 ECE2-201ENST00000324557 1823 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
C11orf49Q9H6J7 ACSM2B-208ENST00000565322 1834 ntTSL 2 BASIC18.65■□□□□ 0.58
C11orf49Q9H6J7 DBN1-201ENST00000292385 3072 ntAPPRIS P4 TSL 1 (best) BASIC18.65■□□□□ 0.58
C11orf49Q9H6J7 CNTNAP3B-202ENST00000341990 2666 ntTSL 2 BASIC18.65■□□□□ 0.58
C11orf49Q9H6J7 FOXC1-201ENST00000380874 3926 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
C11orf49Q9H6J7 AGFG2-201ENST00000300176 4796 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
C11orf49Q9H6J7 PPT2-246ENST00000375137 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.58
C11orf49Q9H6J7 HS3ST4-201ENST00000331351 3203 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
C11orf49Q9H6J7 CCKBR-203ENST00000525462 2138 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
C11orf49Q9H6J7 SCYL1-202ENST00000279270 1659 ntTSL 5 BASIC18.64■□□□□ 0.57
C11orf49Q9H6J7 MIOX-202ENST00000395732 1658 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
C11orf49Q9H6J7 BEND5-201ENST00000371833 1716 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
C11orf49Q9H6J7 KAT5-203ENST00000377046 2237 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
C11orf49Q9H6J7 WNT7B-202ENST00000409496 2285 ntAPPRIS ALT1 TSL 2 BASIC18.64■□□□□ 0.57
C11orf49Q9H6J7 RESP18-201ENST00000333527 795 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.57
C11orf49Q9H6J7 AMACR-202ENST00000382068 862 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
C11orf49Q9H6J7 PP14571-201ENST00000404327 934 ntTSL 2 BASIC18.64■□□□□ 0.57
C11orf49Q9H6J7 Z94721.1-201ENST00000444102 385 ntTSL 5 BASIC18.64■□□□□ 0.57
C11orf49Q9H6J7 NUTM2A-AS1-212ENST00000458739 733 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
C11orf49Q9H6J7 MPZL1-209ENST00000474859 630 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
C11orf49Q9H6J7 HEXIM2-206ENST00000591576 1176 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
C11orf49Q9H6J7 SNX12-206ENST00000622259 661 ntTSL 5 BASIC18.64■□□□□ 0.57
C11orf49Q9H6J7 CHRNA4-207ENST00000615287 5643 ntTSL 5 BASIC18.64■□□□□ 0.57
C11orf49Q9H6J7 CDCA4-201ENST00000336219 2513 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
C11orf49Q9H6J7 PCOLCE-AS1-201ENST00000442166 2537 ntTSL 2 BASIC18.64■□□□□ 0.57
C11orf49Q9H6J7 SCAI-202ENST00000373549 1968 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
C11orf49Q9H6J7 AC009779.2-201ENST00000552576 1443 ntTSL 4 BASIC18.64■□□□□ 0.57
C11orf49Q9H6J7 VASH1-203ENST00000554237 1462 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
C11orf49Q9H6J7 ANKRD16-203ENST00000380094 2738 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.57
C11orf49Q9H6J7 KRT18P55-202ENST00000578578 1546 ntBASIC18.64■□□□□ 0.57
C11orf49Q9H6J7 PTOV1-AS1-201ENST00000596521 2155 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
C11orf49Q9H6J7 UVSSA-209ENST00000512728 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
C11orf49Q9H6J7 PRPF31-202ENST00000391755 1767 ntTSL 5 BASIC18.63■□□□□ 0.57
C11orf49Q9H6J7 PCDH1-201ENST00000287008 4793 ntAPPRIS P3 TSL 5 BASIC18.63■□□□□ 0.57
C11orf49Q9H6J7 DLGAP1-222ENST00000639615 1898 ntTSL 5 BASIC18.63■□□□□ 0.57
C11orf49Q9H6J7 FBXO24-206ENST00000468962 1901 ntTSL 2 BASIC18.63■□□□□ 0.57
C11orf49Q9H6J7 REXO1L11P-201ENST00000620964 1927 ntBASIC18.63■□□□□ 0.57
C11orf49Q9H6J7 TUBB2B-201ENST00000259818 2020 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
C11orf49Q9H6J7 UBE2G2-201ENST00000330942 721 ntTSL 3 BASIC18.63■□□□□ 0.57
C11orf49Q9H6J7 ZDHHC12-201ENST00000372663 1129 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
C11orf49Q9H6J7 AL096814.1-202ENST00000372963 647 ntAPPRIS P5 TSL 2 BASIC18.63■□□□□ 0.57
C11orf49Q9H6J7 ZNF815P-202ENST00000422825 805 ntTSL 5 BASIC18.63■□□□□ 0.57
C11orf49Q9H6J7 AC093459.1-202ENST00000438963 768 ntTSL 3 BASIC18.63■□□□□ 0.57
C11orf49Q9H6J7 LINC01160-201ENST00000441004 768 ntTSL 3 BASIC18.63■□□□□ 0.57
C11orf49Q9H6J7 NECAP2-203ENST00000457722 935 ntTSL 2 BASIC18.63■□□□□ 0.57
C11orf49Q9H6J7 AC135586.1-201ENST00000539323 574 ntBASIC18.63■□□□□ 0.57
C11orf49Q9H6J7 ATXN2-AS-201ENST00000547021 485 ntTSL 2 BASIC18.63■□□□□ 0.57
C11orf49Q9H6J7 LINC01775-201ENST00000587826 371 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
C11orf49Q9H6J7 TRAPPC3-210ENST00000617904 1305 ntTSL 2 BASIC18.63■□□□□ 0.57
C11orf49Q9H6J7 SNRPF-201ENST00000266735 1389 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
C11orf49Q9H6J7 EIF5A-206ENST00000571955 1366 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
C11orf49Q9H6J7 SPNS2-201ENST00000329078 3447 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
C11orf49Q9H6J7 HOXA10-202ENST00000396344 1570 ntAPPRIS ALT1 TSL 1 (best) BASIC18.63■□□□□ 0.57
C11orf49Q9H6J7 COTL1-203ENST00000564057 1677 ntTSL 5 BASIC18.63■□□□□ 0.57
C11orf49Q9H6J7 REEP1-208ENST00000538924 1702 ntTSL 5 BASIC18.63■□□□□ 0.57
C11orf49Q9H6J7 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
C11orf49Q9H6J7 GPANK1-202ENST00000375895 1800 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
C11orf49Q9H6J7 SLC39A5-201ENST00000266980 2031 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
C11orf49Q9H6J7 HNRNPK-202ENST00000360384 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC18.62■□□□□ 0.57
C11orf49Q9H6J7 REXO1L9P-201ENST00000604264 2108 ntBASIC18.62■□□□□ 0.57
C11orf49Q9H6J7 GPR35-201ENST00000319838 2249 ntAPPRIS P3 TSL 2 BASIC18.62■□□□□ 0.57
C11orf49Q9H6J7 NDUFB7-201ENST00000215565 531 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
C11orf49Q9H6J7 HCST-201ENST00000246551 613 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
C11orf49Q9H6J7 PPP1R27-201ENST00000330261 782 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
C11orf49Q9H6J7 KIAA0907-201ENST00000368319 1155 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
C11orf49Q9H6J7 MRPL28-202ENST00000389675 865 ntAPPRIS P1 TSL 3 BASIC18.62■□□□□ 0.57
C11orf49Q9H6J7 SUMO1-201ENST00000392244 831 ntTSL 2 BASIC18.62■□□□□ 0.57
C11orf49Q9H6J7 FAM166B-201ENST00000399742 958 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
C11orf49Q9H6J7 SUMO1-209ENST00000409712 761 ntTSL 2 BASIC18.62■□□□□ 0.57
C11orf49Q9H6J7 AL353705.2-201ENST00000428243 662 ntBASIC18.62■□□□□ 0.57
C11orf49Q9H6J7 C8orf46-205ENST00000480005 865 ntTSL 2 BASIC18.62■□□□□ 0.57
C11orf49Q9H6J7 AC005520.2-201ENST00000556194 573 ntTSL 2 BASIC18.62■□□□□ 0.57
C11orf49Q9H6J7 AC091544.3-201ENST00000556424 531 ntTSL 2 BASIC18.62■□□□□ 0.57
C11orf49Q9H6J7 PIH1D1-209ENST00000596049 992 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
C11orf49Q9H6J7 AL589739.1-201ENST00000607720 493 ntBASIC18.62■□□□□ 0.57
C11orf49Q9H6J7 AC120498.9-201ENST00000339021 3867 ntBASIC18.62■□□□□ 0.57
C11orf49Q9H6J7 HEPN1-201ENST00000408930 1434 ntAPPRIS P1 BASIC18.62■□□□□ 0.57
C11orf49Q9H6J7 BORCS8-MEF2B-203ENST00000514819 1406 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
C11orf49Q9H6J7 JPT1-209ENST00000482348 1614 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
C11orf49Q9H6J7 TRIM17-204ENST00000366698 1748 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
C11orf49Q9H6J7 RBM45-201ENST00000286070 1785 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
C11orf49Q9H6J7 CFAP77-201ENST00000343036 1818 ntAPPRIS P3 TSL 2 BASIC18.62■□□□□ 0.57
C11orf49Q9H6J7 CLIP2-201ENST00000223398 5563 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
C11orf49Q9H6J7 ZNF846-205ENST00000588267 1943 ntTSL 2 BASIC18.62■□□□□ 0.57
C11orf49Q9H6J7 IGFALS-202ENST00000415638 2136 ntTSL 2 BASIC18.62■□□□□ 0.57
C11orf49Q9H6J7 ELN-202ENST00000320399 2274 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
C11orf49Q9H6J7 MARCH8-201ENST00000319836 5272 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
C11orf49Q9H6J7 ATRIP-202ENST00000346691 2509 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
C11orf49Q9H6J7 SLC27A3-204ENST00000368661 2410 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
C11orf49Q9H6J7 SLC27A3-214ENST00000624995 2413 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
C11orf49Q9H6J7 MXD3-202ENST00000427908 2269 ntTSL 2 BASIC18.61■□□□□ 0.57
C11orf49Q9H6J7 KRT79-201ENST00000330553 2068 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
C11orf49Q9H6J7 ZNF692-204ENST00000451251 2065 ntAPPRIS ALT2 TSL 2 BASIC18.61■□□□□ 0.57
C11orf49Q9H6J7 MAFG-201ENST00000357736 5040 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 40.1 ms