Protein–RNA interactions for Protein: Q9BZ76

CNTNAP3, Contactin-associated protein-like 3, humanhuman

Predictions only

Length 1,288 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP3Q9BZ76 CBR1-205ENST00000530908 1924 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
CNTNAP3Q9BZ76 PEX5L-206ENST00000465751 2147 ntAPPRIS ALT2 TSL 2 BASIC16.33■□□□□ 0.2
CNTNAP3Q9BZ76 AL049812.1-201ENST00000432563 2267 ntBASIC16.33■□□□□ 0.2
CNTNAP3Q9BZ76 CCT4-204ENST00000544079 2261 ntTSL 2 BASIC16.33■□□□□ 0.2
CNTNAP3Q9BZ76 SYNM-202ENST00000336292 7394 ntAPPRIS P4 TSL 1 (best) BASIC16.33■□□□□ 0.2
CNTNAP3Q9BZ76 UBB-201ENST00000302182 1225 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CNTNAP3Q9BZ76 SLC16A13-201ENST00000308027 1748 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CNTNAP3Q9BZ76 FASTK-202ENST00000353841 1402 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
CNTNAP3Q9BZ76 ZNF346-201ENST00000358149 2314 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CNTNAP3Q9BZ76 BEX3-203ENST00000372635 805 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
CNTNAP3Q9BZ76 LYPLA2-205ENST00000374514 1810 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CNTNAP3Q9BZ76 RBM14-202ENST00000393979 1426 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
CNTNAP3Q9BZ76 HNRNPA3P1-201ENST00000401429 1139 ntBASIC16.32■□□□□ 0.2
CNTNAP3Q9BZ76 LRP5L-201ENST00000402785 1193 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
CNTNAP3Q9BZ76 MBIP-203ENST00000416007 1648 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
CNTNAP3Q9BZ76 RCAN3-204ENST00000425530 997 ntTSL 5 BASIC16.32■□□□□ 0.2
CNTNAP3Q9BZ76 AC103564.2-201ENST00000432853 1299 ntBASIC16.32■□□□□ 0.2
CNTNAP3Q9BZ76 AC234783.1-201ENST00000441761 496 ntBASIC16.32■□□□□ 0.2
CNTNAP3Q9BZ76 HNRNPA3P5-201ENST00000455201 833 ntBASIC16.32■□□□□ 0.2
CNTNAP3Q9BZ76 FBXO24-206ENST00000468962 1901 ntTSL 2 BASIC16.32■□□□□ 0.2
CNTNAP3Q9BZ76 AC010460.3-201ENST00000511359 1579 ntBASIC16.32■□□□□ 0.2
CNTNAP3Q9BZ76 RNF167-205ENST00000571816 1728 ntAPPRIS P3 TSL 5 BASIC16.32■□□□□ 0.2
CNTNAP3Q9BZ76 GADD45B-204ENST00000587345 765 ntTSL 2 BASIC16.32■□□□□ 0.2
CNTNAP3Q9BZ76 C19orf70-204ENST00000587950 655 ntTSL 2 BASIC16.32■□□□□ 0.2
CNTNAP3Q9BZ76 AC040963.1-202ENST00000589729 644 ntTSL 5 BASIC16.32■□□□□ 0.2
CNTNAP3Q9BZ76 FAM129C-208ENST00000599164 2073 ntAPPRIS ALT2 TSL 2 BASIC16.32■□□□□ 0.2
CNTNAP3Q9BZ76 MMP28-204ENST00000615136 2033 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
CNTNAP3Q9BZ76 MIR6775-201ENST00000617557 69 ntBASIC16.32■□□□□ 0.2
CNTNAP3Q9BZ76 FARP1-242ENST00000627049 5103 ntTSL 5 BASIC16.32■□□□□ 0.2
CNTNAP3Q9BZ76 CABIN1-202ENST00000337989 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
CNTNAP3Q9BZ76 AKNA-205ENST00000374079 2138 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
CNTNAP3Q9BZ76 FXYD6-211ENST00000539526 2132 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
CNTNAP3Q9BZ76 AC005920.1-201ENST00000501718 2054 ntTSL 2 BASIC16.31■□□□□ 0.2
CNTNAP3Q9BZ76 FAM3A-201ENST00000322269 1815 ntTSL 5 BASIC16.31■□□□□ 0.2
CNTNAP3Q9BZ76 GCOM1-202ENST00000380569 1846 ntAPPRIS P3 TSL 2 BASIC16.31■□□□□ 0.2
CNTNAP3Q9BZ76 YBX3-201ENST00000228251 1796 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
CNTNAP3Q9BZ76 CAPS-201ENST00000452990 1789 ntTSL 5 BASIC16.31■□□□□ 0.2
CNTNAP3Q9BZ76 PI4KAP1-204ENST00000612579 1703 ntBASIC16.31■□□□□ 0.2
CNTNAP3Q9BZ76 LYPD3-201ENST00000244333 1694 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CNTNAP3Q9BZ76 TRMT44-205ENST00000513449 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
CNTNAP3Q9BZ76 CABP7-201ENST00000216144 3259 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CNTNAP3Q9BZ76 ZNF655-202ENST00000320583 1601 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
CNTNAP3Q9BZ76 PIGF-201ENST00000281382 1372 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CNTNAP3Q9BZ76 UBAP1L-201ENST00000502113 1381 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
CNTNAP3Q9BZ76 CORO1A-208ENST00000565497 1348 ntTSL 5 BASIC16.31■□□□□ 0.2
CNTNAP3Q9BZ76 PAM16-201ENST00000318059 587 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CNTNAP3Q9BZ76 KIAA0907-201ENST00000368319 1155 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
CNTNAP3Q9BZ76 ZDHHC12-201ENST00000372663 1129 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CNTNAP3Q9BZ76 AL391650.1-205ENST00000433939 579 ntAPPRIS P1 TSL 3 BASIC16.31■□□□□ 0.2
CNTNAP3Q9BZ76 AC099548.2-209ENST00000480264 625 ntBASIC16.31■□□□□ 0.2
CNTNAP3Q9BZ76 LEPROTL1-203ENST00000518001 589 ntTSL 4 BASIC16.31■□□□□ 0.2
CNTNAP3Q9BZ76 GATD1-206ENST00000526325 756 ntTSL 5 BASIC16.31■□□□□ 0.2
CNTNAP3Q9BZ76 AL133523.1-201ENST00000554537 331 ntTSL 3 BASIC16.31■□□□□ 0.2
CNTNAP3Q9BZ76 FOS-206ENST00000555347 1280 ntTSL 2 BASIC16.31■□□□□ 0.2
CNTNAP3Q9BZ76 RARRES2P8-201ENST00000566335 367 ntBASIC16.31■□□□□ 0.2
CNTNAP3Q9BZ76 AC243964.2-202ENST00000591312 752 ntTSL 2 BASIC16.31■□□□□ 0.2
CNTNAP3Q9BZ76 AL590235.2-202ENST00000602543 594 ntTSL 5 BASIC16.31■□□□□ 0.2
CNTNAP3Q9BZ76 TAL1-201ENST00000294339 5001 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CNTNAP3Q9BZ76 SYT3-206ENST00000600079 2463 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CNTNAP3Q9BZ76 SLC2A11-204ENST00000398356 2388 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
CNTNAP3Q9BZ76 RAB1A-204ENST00000409892 2254 ntTSL 2 BASIC16.31■□□□□ 0.2
CNTNAP3Q9BZ76 GGN-201ENST00000334928 2239 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CNTNAP3Q9BZ76 TP73-202ENST00000354437 2140 ntTSL 5 BASIC16.31■□□□□ 0.2
CNTNAP3Q9BZ76 C19orf25-207ENST00000588871 2128 ntTSL 5 BASIC16.31■□□□□ 0.2
CNTNAP3Q9BZ76 FIGNL2-202ENST00000618634 4812 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
CNTNAP3Q9BZ76 LZTS2-202ENST00000370223 2883 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CNTNAP3Q9BZ76 RAB4A-205ENST00000618010 2799 ntTSL 3 BASIC16.31■□□□□ 0.2
CNTNAP3Q9BZ76 LINC01356-201ENST00000401018 1819 ntTSL 2 BASIC16.31■□□□□ 0.2
CNTNAP3Q9BZ76 OGFOD2-201ENST00000228922 1780 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CNTNAP3Q9BZ76 ARHGAP35-201ENST00000404338 8889 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CNTNAP3Q9BZ76 SIM2-201ENST00000290399 4442 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CNTNAP3Q9BZ76 CLN3-204ENST00000357857 1720 ntTSL 2 BASIC16.31■□□□□ 0.2
CNTNAP3Q9BZ76 DAPK2-202ENST00000457488 1741 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CNTNAP3Q9BZ76 TLE4-205ENST00000376544 4871 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
CNTNAP3Q9BZ76 GUCD1-203ENST00000404664 1606 ntTSL 2 BASIC16.3■□□□□ 0.2
CNTNAP3Q9BZ76 SSH1-209ENST00000551165 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
CNTNAP3Q9BZ76 ATP6V1G2-205ENST00000303892 1588 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CNTNAP3Q9BZ76 PPP2R5A-201ENST00000261461 3128 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CNTNAP3Q9BZ76 NIPAL2-201ENST00000341166 4581 ntTSL 2 BASIC16.3■□□□□ 0.2
CNTNAP3Q9BZ76 PRR36-202ENST00000618550 4456 ntAPPRIS P2 TSL 5 BASIC16.3■□□□□ 0.2
CNTNAP3Q9BZ76 HSPB8-201ENST00000281938 2152 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CNTNAP3Q9BZ76 CRB3-203ENST00000598494 1443 ntAPPRIS ALT2 TSL 2 BASIC16.3■□□□□ 0.2
CNTNAP3Q9BZ76 KRT8-216ENST00000552551 2126 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
CNTNAP3Q9BZ76 PDCD10-201ENST00000392750 2067 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CNTNAP3Q9BZ76 IMP3-201ENST00000314852 2028 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
CNTNAP3Q9BZ76 SLC16A5-206ENST00000580123 2019 ntAPPRIS P2 TSL 2 BASIC16.3■□□□□ 0.2
CNTNAP3Q9BZ76 CNNM3-202ENST00000377060 3308 ntTSL 2 BASIC16.3■□□□□ 0.2
CNTNAP3Q9BZ76 AC008764.1-201ENST00000409035 2567 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
CNTNAP3Q9BZ76 CPEB3-203ENST00000614585 5789 ntAPPRIS P3 TSL 5 BASIC16.3■□□□□ 0.2
CNTNAP3Q9BZ76 MIR1908-201ENST00000410394 80 ntBASIC16.3■□□□□ 0.2
CNTNAP3Q9BZ76 KRT18P41-201ENST00000518924 1277 ntBASIC16.3■□□□□ 0.2
CNTNAP3Q9BZ76 SPSB2-204ENST00000523102 1205 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CNTNAP3Q9BZ76 SPSB2-205ENST00000524270 1236 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CNTNAP3Q9BZ76 AL139349.1-201ENST00000530479 577 ntTSL 4 BASIC16.3■□□□□ 0.2
CNTNAP3Q9BZ76 TBC1D16-203ENST00000570373 961 ntTSL 5 BASIC16.3■□□□□ 0.2
CNTNAP3Q9BZ76 AC244517.4-201ENST00000624549 580 ntTSL 4 BASIC16.3■□□□□ 0.2
CNTNAP3Q9BZ76 PPA1-206ENST00000625364 644 ntTSL 5 BASIC16.3■□□□□ 0.2
CNTNAP3Q9BZ76 CWH43-201ENST00000226432 2472 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CNTNAP3Q9BZ76 ICA1-206ENST00000402384 2458 ntAPPRIS P3 TSL 2 BASIC16.3■□□□□ 0.2
CNTNAP3Q9BZ76 SEMA6D-205ENST00000389425 2318 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 28.5 ms