Protein–RNA interactions for Protein: Q9BWH6

RPAP1, RNA polymerase II-associated protein 1, humanhuman

Predicted RBP Predictions only

Length 1,393 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPAP1Q9BWH6 CYBA-210ENST00000569359 1415 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
RPAP1Q9BWH6 PIR-202ENST00000380421 1539 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
RPAP1Q9BWH6 TRH-202ENST00000507066 1580 ntAPPRIS ALT1 TSL 5 BASIC20.82■□□□□ 0.92
RPAP1Q9BWH6 YIPF2-204ENST00000586748 1550 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
RPAP1Q9BWH6 NCOA5-201ENST00000290231 3220 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
RPAP1Q9BWH6 GCAT-202ENST00000323205 1656 ntTSL 2 BASIC20.82■□□□□ 0.92
RPAP1Q9BWH6 VRK1-201ENST00000216639 1745 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
RPAP1Q9BWH6 AC046185.3-201ENST00000623228 1824 ntBASIC20.81■□□□□ 0.92
RPAP1Q9BWH6 GYG1-214ENST00000627418 1831 ntTSL 5 BASIC20.81■□□□□ 0.92
RPAP1Q9BWH6 SLX1A-SULT1A3-202ENST00000565342 2195 ntTSL 2 BASIC20.81■□□□□ 0.92
RPAP1Q9BWH6 TMEM130-202ENST00000345589 2261 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
RPAP1Q9BWH6 ORAOV1-206ENST00000536870 2274 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
RPAP1Q9BWH6 CTNNAL1-204ENST00000374595 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
RPAP1Q9BWH6 QPCTL-201ENST00000012049 2310 ntAPPRIS P1 TSL 2 BASIC20.81■□□□□ 0.92
RPAP1Q9BWH6 ACAP1-201ENST00000158762 2512 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
RPAP1Q9BWH6 INHA-201ENST00000243786 1468 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
RPAP1Q9BWH6 TYROBP-201ENST00000262629 568 ntAPPRIS P3 TSL 1 (best) BASIC20.81■□□□□ 0.92
RPAP1Q9BWH6 PPIB-201ENST00000300026 1081 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
RPAP1Q9BWH6 MTG1-201ENST00000317502 1560 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
RPAP1Q9BWH6 MYL6-202ENST00000348108 722 ntAPPRIS ALT1 TSL 3 BASIC20.81■□□□□ 0.92
RPAP1Q9BWH6 AUNIP-201ENST00000374298 2116 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
RPAP1Q9BWH6 TIMM17B-202ENST00000396779 1099 ntTSL 5 BASIC20.81■□□□□ 0.92
RPAP1Q9BWH6 GPR89P-201ENST00000407924 1495 ntBASIC20.81■□□□□ 0.92
RPAP1Q9BWH6 DFNA5-203ENST00000409970 2005 ntTSL 5 BASIC20.81■□□□□ 0.92
RPAP1Q9BWH6 IGLL3P-201ENST00000412472 434 ntBASIC20.81■□□□□ 0.92
RPAP1Q9BWH6 ALDH2-202ENST00000416293 1572 ntTSL 2 BASIC20.81■□□□□ 0.92
RPAP1Q9BWH6 AC109309.1-201ENST00000418995 435 ntTSL 3 BASIC20.81■□□□□ 0.92
RPAP1Q9BWH6 IDH3B-206ENST00000474315 1279 ntAPPRIS ALT1 TSL 1 (best) BASIC20.81■□□□□ 0.92
RPAP1Q9BWH6 GCH1-204ENST00000491895 2943 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
RPAP1Q9BWH6 DDIT4-AS1-201ENST00000491934 847 ntTSL 5 BASIC20.81■□□□□ 0.92
RPAP1Q9BWH6 MRFAP1-203ENST00000507420 563 ntAPPRIS P1 TSL 4 BASIC20.81■□□□□ 0.92
RPAP1Q9BWH6 TPBG-203ENST00000543496 2881 ntAPPRIS P1 TSL 2 BASIC20.81■□□□□ 0.92
RPAP1Q9BWH6 TBX6-203ENST00000553607 2162 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
RPAP1Q9BWH6 BLOC1S6-202ENST00000562384 494 ntTSL 4 BASIC20.81■□□□□ 0.92
RPAP1Q9BWH6 AC016396.2-201ENST00000562575 1417 ntBASIC20.81■□□□□ 0.92
RPAP1Q9BWH6 HAPLN3-204ENST00000562889 1547 ntTSL 5 BASIC20.81■□□□□ 0.92
RPAP1Q9BWH6 AC130456.4-201ENST00000568635 665 ntTSL 2 BASIC20.81■□□□□ 0.92
RPAP1Q9BWH6 AC027796.2-201ENST00000575326 344 ntBASIC20.81■□□□□ 0.92
RPAP1Q9BWH6 ZNF584-209ENST00000599238 2288 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
RPAP1Q9BWH6 MYBPH-202ENST00000621380 1772 ntTSL 5 BASIC20.81■□□□□ 0.92
RPAP1Q9BWH6 OBSL1-204ENST00000404537 5841 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
RPAP1Q9BWH6 RNPEPL1-201ENST00000270357 5658 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
RPAP1Q9BWH6 PLCL2-204ENST00000615277 4147 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
RPAP1Q9BWH6 GXYLT2-201ENST00000389617 3260 ntAPPRIS P1 TSL 5 BASIC20.8■□□□□ 0.92
RPAP1Q9BWH6 AL138752.2-201ENST00000540557 2591 ntAPPRIS P1 TSL 5 BASIC20.8■□□□□ 0.92
RPAP1Q9BWH6 SPDEF-201ENST00000374037 1895 ntAPPRIS P3 TSL 1 (best) BASIC20.8■□□□□ 0.92
RPAP1Q9BWH6 ST8SIA4-202ENST00000451528 1794 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
RPAP1Q9BWH6 GHRHR-205ENST00000409904 1613 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
RPAP1Q9BWH6 ALDH16A1-201ENST00000293350 3153 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
RPAP1Q9BWH6 PHYHD1-201ENST00000308941 1599 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
RPAP1Q9BWH6 SLC7A9-202ENST00000587772 1568 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
RPAP1Q9BWH6 AC093627.6-201ENST00000478759 1365 ntTSL 5 BASIC20.8■□□□□ 0.92
RPAP1Q9BWH6 KANSL1-202ENST00000432791 5343 ntAPPRIS P3 TSL 1 (best) BASIC20.8■□□□□ 0.92
RPAP1Q9BWH6 TUBA1A-203ENST00000546918 984 ntTSL 3 BASIC20.8■□□□□ 0.92
RPAP1Q9BWH6 AC005829.1-201ENST00000570002 483 ntBASIC20.8■□□□□ 0.92
RPAP1Q9BWH6 TOM1L1-221ENST00000575882 2507 ntAPPRIS P2 TSL 1 (best) BASIC20.8■□□□□ 0.92
RPAP1Q9BWH6 ANKMY1-202ENST00000361678 2499 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
RPAP1Q9BWH6 ZYG11A-203ENST00000612017 3682 ntTSL 5 BASIC20.8■□□□□ 0.92
RPAP1Q9BWH6 SIPA1-209ENST00000534313 3521 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
RPAP1Q9BWH6 TP53BP2-201ENST00000343537 4651 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
RPAP1Q9BWH6 PCCB-209ENST00000469217 1841 ntAPPRIS ALT2 TSL 2 BASIC20.8■□□□□ 0.92
RPAP1Q9BWH6 PAK4-202ENST00000358301 2739 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
RPAP1Q9BWH6 TMEM145-201ENST00000301204 1768 ntAPPRIS P2 TSL 2 BASIC20.79■□□□□ 0.92
RPAP1Q9BWH6 ZNF302-202ENST00000446502 2635 ntAPPRIS ALT2 TSL 2 BASIC20.79■□□□□ 0.92
RPAP1Q9BWH6 AC084018.2-201ENST00000613093 2607 ntBASIC20.79■□□□□ 0.92
RPAP1Q9BWH6 KDM5C-203ENST00000375383 5122 ntAPPRIS ALT2 TSL 5 BASIC20.79■□□□□ 0.92
RPAP1Q9BWH6 FICD-204ENST00000552695 3347 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
RPAP1Q9BWH6 PCDHGC3-205ENST00000617641 2346 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
RPAP1Q9BWH6 PLEKHG6-203ENST00000396988 2963 ntAPPRIS P1 TSL 2 BASIC20.79■□□□□ 0.92
RPAP1Q9BWH6 NEIL2-203ENST00000436750 2226 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
RPAP1Q9BWH6 SLC47A1-209ENST00000575023 2224 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
RPAP1Q9BWH6 CXXC1-212ENST00000589940 2242 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
RPAP1Q9BWH6 CLCN2-204ENST00000434054 2897 ntAPPRIS ALT2 TSL 2 BASIC20.79■□□□□ 0.92
RPAP1Q9BWH6 IFNGR1-201ENST00000367739 2139 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
RPAP1Q9BWH6 EN2-201ENST00000297375 3395 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
RPAP1Q9BWH6 PODXL-201ENST00000322985 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
RPAP1Q9BWH6 SEMA6B-201ENST00000586582 3986 ntAPPRIS P2 TSL 1 (best) BASIC20.79■□□□□ 0.92
RPAP1Q9BWH6 CCDC154-202ENST00000409671 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
RPAP1Q9BWH6 NKILA-202ENST00000614771 2598 ntBASIC20.79■□□□□ 0.92
RPAP1Q9BWH6 TRA2A-212ENST00000621813 1931 ntAPPRIS ALT2 TSL 2 BASIC20.79■□□□□ 0.92
RPAP1Q9BWH6 LYPLA2-204ENST00000374505 907 ntTSL 3 BASIC20.79■□□□□ 0.92
RPAP1Q9BWH6 ACTG1P4-201ENST00000425123 1122 ntBASIC20.79■□□□□ 0.92
RPAP1Q9BWH6 MKNK2P1-201ENST00000437526 628 ntBASIC20.79■□□□□ 0.92
RPAP1Q9BWH6 FTCD-AS1-201ENST00000446649 500 ntTSL 2 BASIC20.79■□□□□ 0.92
RPAP1Q9BWH6 PYCR1-207ENST00000577756 1144 ntTSL 2 BASIC20.79■□□□□ 0.92
RPAP1Q9BWH6 C20orf181-201ENST00000623918 480 ntBASIC20.79■□□□□ 0.92
RPAP1Q9BWH6 AC092865.6-201ENST00000642101 219 ntBASIC20.79■□□□□ 0.92
RPAP1Q9BWH6 DNM1-216ENST00000634267 2909 ntTSL 5 BASIC20.79■□□□□ 0.92
RPAP1Q9BWH6 ANGPTL4-202ENST00000393962 1705 ntTSL 5 BASIC20.79■□□□□ 0.92
RPAP1Q9BWH6 NODAL-201ENST00000287139 1665 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
RPAP1Q9BWH6 SGCE-206ENST00000445866 1666 ntTSL 5 BASIC20.79■□□□□ 0.92
RPAP1Q9BWH6 DPF2-205ENST00000528416 2799 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
RPAP1Q9BWH6 GHRHR-201ENST00000326139 1602 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
RPAP1Q9BWH6 AC125494.1-203ENST00000396799 1622 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
RPAP1Q9BWH6 KCNQ1-201ENST00000155840 3245 ntAPPRIS P2 TSL 1 (best) BASIC20.79■□□□□ 0.92
RPAP1Q9BWH6 FAM117B-201ENST00000392238 5763 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
RPAP1Q9BWH6 ZNF302-201ENST00000423823 2590 ntAPPRIS P3 TSL 1 (best) BASIC20.79■□□□□ 0.92
RPAP1Q9BWH6 SOGA3-203ENST00000525778 4077 ntAPPRIS P1 TSL 5 BASIC20.78■□□□□ 0.92
RPAP1Q9BWH6 EPHX2-204ENST00000518379 1959 ntAPPRIS ALT2 TSL 5 BASIC20.78■□□□□ 0.92
RPAP1Q9BWH6 AC124067.4-201ENST00000519691 2379 ntBASIC20.78■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 78.5 ms